RNA–Protein interactions for RNA: ENST00000409598.8

SH3D19-203, Transcript of SH3 domain containing 19, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SH3D19, Length 5,284 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-203ENST00000409598 RUSC1-AS1Q66K80 236 aa6.21□□□□□ -1.41
SH3D19-203ENST00000409598 TMEM200BQ69YZ2 307 aa6.21□□□□□ -1.41
SH3D19-203ENST00000409598 FDX2Q6P4F2 183 aa6.21□□□□□ -1.41
SH3D19-203ENST00000409598 SPSB3Q6PJ21 355 aa6.21□□□□□ -1.41
SH3D19-203ENST00000409598 LINC00114Q6XXX2 140 aa6.21□□□□□ -1.41
SH3D19-203ENST00000409598 MITD1Q8WV92 249 aa6.21□□□□□ -1.41
SH3D19-203ENST00000409598 NRGNQ92686 78 aa6.21□□□□□ -1.41
SH3D19-203ENST00000409598 DMRT1Q9Y5R6 373 aa6.21□□□□□ -1.41
SH3D19-203ENST00000409598 TRAV14DV4A0A0A6YYC5 116 aa6.21□□□□□ -1.42
SH3D19-203ENST00000409598 IGHV4-61A0A0C4DH41 118 aa6.21□□□□□ -1.42
SH3D19-203ENST00000409598 GPX1P07203 203 aa6.21□□□□□ -1.42
SH3D19-203ENST00000409598 OR5AC1P0C628 307 aa6.21□□□□□ -1.42
SH3D19-203ENST00000409598 FOXG1P55316 489 aaPredicted RBP6.21□□□□□ -1.42
SH3D19-203ENST00000409598 KHDC3LQ587J8 217 aa6.21□□□□□ -1.42
SH3D19-203ENST00000409598 FFAR4Q5NUL3 377 aa6.21□□□□□ -1.42
SH3D19-203ENST00000409598 TNFSF18Q9UNG2 199 aa6.21□□□□□ -1.42
SH3D19-203ENST00000409598 SDK2Q58EX2 2172 aa6.21□□□□□ -1.42
SH3D19-203ENST00000409598 SFT2D2O95562 160 aa6.21□□□□□ -1.42
SH3D19-203ENST00000409598 CLPSP04118 112 aa6.21□□□□□ -1.42
SH3D19-203ENST00000409598 HIST1H1AQ02539 215 aaPredicted RBP6.21□□□□□ -1.42
SH3D19-203ENST00000409598 ZNF345Q14585 488 aa6.21□□□□□ -1.42
SH3D19-203ENST00000409598 PCM1Q15154 2024 aa6.21□□□□□ -1.42
SH3D19-203ENST00000409598 MFNGO00587 321 aa6.21□□□□□ -1.42
SH3D19-203ENST00000409598 EFNA2O43921 213 aa6.21□□□□□ -1.42
SH3D19-203ENST00000409598 PTBP3O95758 552 aaKnown RBP6.21□□□□□ -1.42
SH3D19-203ENST00000409598 TBX6O95947 436 aaPredicted RBP6.21□□□□□ -1.42
SH3D19-203ENST00000409598 OR10J1P30954 320 aa6.21□□□□□ -1.42
SH3D19-203ENST00000409598 PAX8Q06710 450 aa6.21□□□□□ -1.42
SH3D19-203ENST00000409598 UBE2V2Q15819 145 aa6.21□□□□□ -1.42
SH3D19-203ENST00000409598 C1QL2Q7Z5L3 287 aa6.21□□□□□ -1.42
SH3D19-203ENST00000409598 FAM210BQ96KR6 192 aa6.21□□□□□ -1.42
SH3D19-203ENST00000409598 MSGN1A6NI15 193 aa6.2□□□□□ -1.42
SH3D19-203ENST00000409598 SHISA9B4DS77 424 aa6.2□□□□□ -1.42
SH3D19-203ENST00000409598 DEDDO75618 318 aa6.2□□□□□ -1.42
SH3D19-203ENST00000409598 LY6G6DO95868 133 aa6.2□□□□□ -1.42
SH3D19-203ENST00000409598 RAB32Q13637 225 aa6.2□□□□□ -1.42
SH3D19-203ENST00000409598 C1orf122Q6ZSJ8 110 aa6.2□□□□□ -1.42
SH3D19-203ENST00000409598 PCP4P48539 62 aa6.2□□□□□ -1.42
SH3D19-203ENST00000409598 ZNF324BQ6AW86 544 aaPredicted RBP6.2□□□□□ -1.42
SH3D19-203ENST00000409598 PRR27Q6MZM9 219 aa6.2□□□□□ -1.42
SH3D19-203ENST00000409598 PRSS54Q6PEW0 395 aa6.2□□□□□ -1.42
SH3D19-203ENST00000409598 LCN15Q6UWW0 184 aa6.2□□□□□ -1.42
SH3D19-203ENST00000409598 NPVFQ9HCQ7 196 aa6.2□□□□□ -1.42
SH3D19-203ENST00000409598 LEPP41159 167 aa6.2□□□□□ -1.42
SH3D19-203ENST00000409598 HERPUD1Q15011 391 aa6.2□□□□□ -1.42
SH3D19-203ENST00000409598 FAM159AQ6UWV7 190 aa6.2□□□□□ -1.42
SH3D19-203ENST00000409598 NHLRC2Q8NBF2 726 aa6.2□□□□□ -1.42
SH3D19-203ENST00000409598 SRSF12Q8WXF0 261 aaKnown RBP6.2□□□□□ -1.42
SH3D19-203ENST00000409598 ST6GALNAC6Q969X2 333 aa6.2□□□□□ -1.42
SH3D19-203ENST00000409598 Q96M66 194 aa6.2□□□□□ -1.42
SH3D19-203ENST00000409598 SLC2A9Q9NRM0 540 aa6.2□□□□□ -1.42
SH3D19-203ENST00000409598 GREB1Q4ZG55 1949 aa6.2□□□□□ -1.42
SH3D19-203ENST00000409598 A0A1W2PPQ1 181 aa6.2□□□□□ -1.42
SH3D19-203ENST00000409598 PGPA6NDG6 321 aa6.2□□□□□ -1.42
SH3D19-203ENST00000409598 CA2P00918 260 aa6.2□□□□□ -1.42
SH3D19-203ENST00000409598 SCTP09683 121 aa6.2□□□□□ -1.42
SH3D19-203ENST00000409598 RNF224P0DH78 156 aa6.2□□□□□ -1.42
SH3D19-203ENST00000409598 VAMP3Q15836 100 aa6.2□□□□□ -1.42
SH3D19-203ENST00000409598 ZNF585BQ52M93 769 aa6.2□□□□□ -1.42
SH3D19-203ENST00000409598 PEF1Q9UBV8 284 aaKnown RBP6.2□□□□□ -1.42
SH3D19-203ENST00000409598 IL6RP08887 468 aaPredicted RBP6.19□□□□□ -1.42
SH3D19-203ENST00000409598 CD81P60033 236 aa6.19□□□□□ -1.42
SH3D19-203ENST00000409598 RANP62826 216 aaKnown RBP6.19□□□□□ -1.42
SH3D19-203ENST00000409598 DEFB112Q30KQ8 113 aa6.19□□□□□ -1.42
SH3D19-203ENST00000409598 MAJINQ3KP22 176 aa6.19□□□□□ -1.42
SH3D19-203ENST00000409598 CD200R1LQ6Q8B3 271 aa6.19□□□□□ -1.42
SH3D19-203ENST00000409598 BTNL8Q6UX41 500 aa6.19□□□□□ -1.42
SH3D19-203ENST00000409598 WFDC11Q8NEX6 87 aa6.19□□□□□ -1.42
SH3D19-203ENST00000409598 WFDC6Q9BQY6 131 aa6.19□□□□□ -1.42
SH3D19-203ENST00000409598 FAM103A1Q9BTL3 118 aaKnown RBP6.19□□□□□ -1.42
SH3D19-203ENST00000409598 A0A0G2JK05 382 aa6.19□□□□□ -1.42
SH3D19-203ENST00000409598 SLC31A2O15432 143 aa6.19□□□□□ -1.42
SH3D19-203ENST00000409598 CDS2O95674 445 aa6.19□□□□□ -1.42
SH3D19-203ENST00000409598 RCC1P18754 421 aaPredicted RBP6.19□□□□□ -1.42
SH3D19-203ENST00000409598 FAM162BQ5T6X4 162 aa6.19□□□□□ -1.42
SH3D19-203ENST00000409598 TOMM20LQ6UXN7 152 aa6.19□□□□□ -1.42
SH3D19-203ENST00000409598 OR51G1Q8NGK1 321 aa6.19□□□□□ -1.42
SH3D19-203ENST00000409598 TMEM37Q8WXS4 190 aa6.19□□□□□ -1.42
SH3D19-203ENST00000409598 IGLV1-44P01699 117 aa6.19□□□□□ -1.42
SH3D19-203ENST00000409598 IL4P05112 153 aa6.19□□□□□ -1.42
SH3D19-203ENST00000409598 DDTP30046 118 aa6.19□□□□□ -1.42
SH3D19-203ENST00000409598 PMS2P11Q13670 270 aa6.19□□□□□ -1.42
SH3D19-203ENST00000409598 GBGT1Q8N5D6 347 aa6.19□□□□□ -1.42
SH3D19-203ENST00000409598 ZNF439Q8NDP4 499 aa6.19□□□□□ -1.42
SH3D19-203ENST00000409598 ZNRF4Q8WWF5 429 aa6.19□□□□□ -1.42
SH3D19-203ENST00000409598 AMELYQ99218 206 aa6.19□□□□□ -1.42
SH3D19-203ENST00000409598 GGACTQ9BVM4 153 aa6.19□□□□□ -1.42
SH3D19-203ENST00000409598 KCNK15Q9H427 330 aa6.19□□□□□ -1.42
SH3D19-203ENST00000409598 TRBV7-1A0A0A6YYK4 115 aa6.19□□□□□ -1.42
SH3D19-203ENST00000409598 IGHV1-3A0A0C4DH29 117 aa6.19□□□□□ -1.42
SH3D19-203ENST00000409598 TMEM262E9PQX1 116 aa6.19□□□□□ -1.42
SH3D19-203ENST00000409598 CLDN34H7C241 214 aa6.19□□□□□ -1.42
SH3D19-203ENST00000409598 IGKV3-20P01619 116 aa6.19□□□□□ -1.42
SH3D19-203ENST00000409598 SUMO1P63165 101 aaKnown RBP6.19□□□□□ -1.42
SH3D19-203ENST00000409598 C1orf100Q5SVJ3 147 aa6.19□□□□□ -1.42
SH3D19-203ENST00000409598 OR4C5Q8NGB2 326 aa6.19□□□□□ -1.42
SH3D19-203ENST00000409598 RPUSD4Q96CM3 377 aaKnown RBP6.19□□□□□ -1.42
SH3D19-203ENST00000409598 SMIM7Q9BQ49 75 aa6.19□□□□□ -1.42
SH3D19-203ENST00000409598 WNT10AQ9GZT5 417 aa6.19□□□□□ -1.42
SH3D19-203ENST00000409598 MARCH11A6NNE9 402 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms