RNA–Protein interactions for RNA: ENST00000429670.2

GYPB-201, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best) BASIC

Gene GYPB, Length 239 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-201ENST00000429670 OR5J2Q8NH18 312 aa1.38□□□□□ -2.19
GYPB-201ENST00000429670 MRPL30Q8TCC3 161 aaKnown RBP1.38□□□□□ -2.19
GYPB-201ENST00000429670 ZCCHC13Q8WW36 166 aaKnown RBP1.38□□□□□ -2.19
GYPB-201ENST00000429670 MRPS24Q96EL2 167 aaKnown RBP1.38□□□□□ -2.19
GYPB-201ENST00000429670 BTF3L4Q96K17 158 aa1.38□□□□□ -2.19
GYPB-201ENST00000429670 PPP1R2P1Q96PQ5 205 aa1.38□□□□□ -2.19
GYPB-201ENST00000429670 NMNAT3Q96T66 252 aa1.38□□□□□ -2.19
GYPB-201ENST00000429670 CMSS1Q9BQ75 279 aaKnown RBP1.38□□□□□ -2.19
GYPB-201ENST00000429670 ULBP3Q9BZM4 244 aa1.38□□□□□ -2.19
GYPB-201ENST00000429670 RNF122Q9H9V4 155 aa1.38□□□□□ -2.19
GYPB-201ENST00000429670 NMNAT1Q9HAN9 279 aaPredicted RBP1.38□□□□□ -2.19
GYPB-201ENST00000429670 DOK5Q9P104 306 aa1.38□□□□□ -2.19
GYPB-201ENST00000429670 PRO2289Q9P1D8 64 aa1.38□□□□□ -2.19
GYPB-201ENST00000429670 ARL2BPQ9Y2Y0 163 aa1.38□□□□□ -2.19
GYPB-201ENST00000429670 SAMHD1Q9Y3Z3 626 aaKnown RBP1.38□□□□□ -2.19
GYPB-201ENST00000429670 ARL5AQ9Y689 179 aa1.38□□□□□ -2.19
GYPB-201ENST00000429670 TMEM56-RWDD3S4R434 201 aa1.38□□□□□ -2.19
GYPB-201ENST00000429670 SLIT2O94813 1529 aa1.38□□□□□ -2.19
GYPB-201ENST00000429670 WRNQ14191 1432 aaPredicted RBP eCLIP1.38□□□□□ -2.19
GYPB-201ENST00000429670 ZNF407Q9C0G0 2248 aa1.38□□□□□ -2.19
GYPB-201ENST00000429670 TRAV26-2A0A0B4J265 109 aa1.37□□□□□ -2.19
GYPB-201ENST00000429670 A0A0J9YY10 115 aa1.37□□□□□ -2.19
GYPB-201ENST00000429670 A0A1B0GX78 115 aa1.37□□□□□ -2.19
GYPB-201ENST00000429670 IRGMA1A4Y4 181 aa1.37□□□□□ -2.19
GYPB-201ENST00000429670 C19orf84I3L1E1 186 aa1.37□□□□□ -2.19
GYPB-201ENST00000429670 TXNDC9O14530 226 aa1.37□□□□□ -2.19
GYPB-201ENST00000429670 OR7C1O76099 320 aaPredicted RBP1.37□□□□□ -2.19
GYPB-201ENST00000429670 CNIH1O95406 144 aa1.37□□□□□ -2.19
GYPB-201ENST00000429670 PRM2P04554 102 aa1.37□□□□□ -2.19
GYPB-201ENST00000429670 S100A7P31151 101 aa1.37□□□□□ -2.19
GYPB-201ENST00000429670 S100A5P33763 92 aa1.37□□□□□ -2.19
GYPB-201ENST00000429670 RPL5P46777 297 aaKnown RBP1.37□□□□□ -2.19
GYPB-201ENST00000429670 RPL18Q07020 188 aaKnown RBP1.37□□□□□ -2.19
GYPB-201ENST00000429670 FOXF1Q12946 379 aa1.37□□□□□ -2.19
GYPB-201ENST00000429670 SS18Q15532 418 aa1.37□□□□□ -2.19
GYPB-201ENST00000429670 TEX36Q5VZQ5 186 aa1.37□□□□□ -2.19
GYPB-201ENST00000429670 AGTRAPQ6RW13 159 aa1.37□□□□□ -2.19
GYPB-201ENST00000429670 Q6ZS52 159 aa1.37□□□□□ -2.19
GYPB-201ENST00000429670 C12orf45Q8N5I9 185 aaPredicted RBP1.37□□□□□ -2.19
GYPB-201ENST00000429670 OR8B12Q8NGG6 310 aa1.37□□□□□ -2.19
GYPB-201ENST00000429670 OR2T4Q8NH00 348 aa1.37□□□□□ -2.19
GYPB-201ENST00000429670 SLC7A6Q92536 515 aa1.37□□□□□ -2.19
GYPB-201ENST00000429670 KLF6Q99612 283 aaPredicted RBP1.37□□□□□ -2.19
GYPB-201ENST00000429670 CCDC94Q9BW85 323 aaPredicted RBP1.37□□□□□ -2.19
GYPB-201ENST00000429670 KRTAP4-1Q9BYQ7 146 aa1.37□□□□□ -2.19
GYPB-201ENST00000429670 WDR61Q9GZS3 305 aaKnown RBP1.37□□□□□ -2.19
GYPB-201ENST00000429670 EFCAB1Q9HAE3 211 aa1.37□□□□□ -2.19
GYPB-201ENST00000429670 PARVBQ9HBI1 364 aa1.37□□□□□ -2.19
GYPB-201ENST00000429670 IDI2-AS1Q9NZ38 188 aa1.37□□□□□ -2.19
GYPB-201ENST00000429670 HHLA3Q9XRX5 114 aa1.37□□□□□ -2.19
GYPB-201ENST00000429670 PRELID3BQ9Y3B1 194 aa1.37□□□□□ -2.19
GYPB-201ENST00000429670 SHANK3Q9BYB0 1731 aa1.37□□□□□ -2.19
GYPB-201ENST00000429670 MDFIC2A0A1B0GVS7 189 aa1.36□□□□□ -2.19
GYPB-201ENST00000429670 SDHAF1A6NFY7 115 aa1.36□□□□□ -2.19
GYPB-201ENST00000429670 I3L521 148 aa1.36□□□□□ -2.19
GYPB-201ENST00000429670 FAAHO00519 579 aa1.36□□□□□ -2.19
GYPB-201ENST00000429670 LEPROTO15243 131 aa1.36□□□□□ -2.19
GYPB-201ENST00000429670 CREBL2O60519 120 aaPredicted RBP1.36□□□□□ -2.19
GYPB-201ENST00000429670 ZNF189O75820 626 aaPredicted RBP1.36□□□□□ -2.19
GYPB-201ENST00000429670 SERPINA1P01009 418 aa1.36□□□□□ -2.19
GYPB-201ENST00000429670 IFNA10P01566 189 aa1.36□□□□□ -2.19
GYPB-201ENST00000429670 MSMBP08118 114 aa1.36□□□□□ -2.19
GYPB-201ENST00000429670 NFYAP23511 347 aaPredicted RBP1.36□□□□□ -2.19
GYPB-201ENST00000429670 BASP1P80723 227 aaKnown RBP1.36□□□□□ -2.19
GYPB-201ENST00000429670 RELAQ04206 551 aa1.36□□□□□ -2.19
GYPB-201ENST00000429670 RPL22L1Q6P5R6 122 aaKnown RBP1.36□□□□□ -2.19
GYPB-201ENST00000429670 Q6ZTI0 123 aa1.36□□□□□ -2.19
GYPB-201ENST00000429670 SLC35F6Q8N357 371 aa1.36□□□□□ -2.19
GYPB-201ENST00000429670 RPP25LQ8N5L8 163 aaKnown RBP1.36□□□□□ -2.19
GYPB-201ENST00000429670 CT55Q8WUE5 264 aa1.36□□□□□ -2.19
GYPB-201ENST00000429670 TOMM6Q96B49 74 aa1.36□□□□□ -2.19
GYPB-201ENST00000429670 TRPM3Q9HCF6 1732 aaPredicted RBP1.36□□□□□ -2.19
GYPB-201ENST00000429670 CISHQ9NSE2 258 aa1.36□□□□□ -2.19
GYPB-201ENST00000429670 CMTM6Q9NX76 183 aa1.36□□□□□ -2.19
GYPB-201ENST00000429670 PAQR5Q9NXK6 330 aaPredicted RBP1.36□□□□□ -2.19
GYPB-201ENST00000429670 FBXL12Q9NXK8 326 aa1.36□□□□□ -2.19
GYPB-201ENST00000429670 IL36BQ9NZH7 164 aa1.36□□□□□ -2.19
GYPB-201ENST00000429670 REREQ9P2R6 1566 aa1.36□□□□□ -2.19
GYPB-201ENST00000429670 FUT9Q9Y231 359 aa1.36□□□□□ -2.19
GYPB-201ENST00000429670 EIF3AQ14152 1382 aaKnown RBP1.35□□□□□ -2.19
GYPB-201ENST00000429670 PIK3C2GO75747 1445 aa1.35□□□□□ -2.19
GYPB-201ENST00000429670 TRAV7A0A075B6U4 112 aa1.35□□□□□ -2.19
GYPB-201ENST00000429670 TRAV41A0A0B4J266 112 aa1.35□□□□□ -2.19
GYPB-201ENST00000429670 TRGV4A0A0C4DH28 118 aa1.35□□□□□ -2.19
GYPB-201ENST00000429670 TMEM269A0A1B0GVZ9 245 aa1.35□□□□□ -2.19
GYPB-201ENST00000429670 hADV38S2A0JD32 116 aa1.35□□□□□ -2.19
GYPB-201ENST00000429670 VPS37CA5D8V6 355 aaPredicted RBP1.35□□□□□ -2.19
GYPB-201ENST00000429670 FABP5P3A8MUU1 101 aa1.35□□□□□ -2.19
GYPB-201ENST00000429670 ZNF878C9JN71 531 aa1.35□□□□□ -2.19
GYPB-201ENST00000429670 S1PR2O95136 353 aa1.35□□□□□ -2.19
GYPB-201ENST00000429670 RBP1P09455 135 aa1.35□□□□□ -2.19
GYPB-201ENST00000429670 SMIM10L2AP0DMW4 78 aa1.35□□□□□ -2.19
GYPB-201ENST00000429670 SMIM10L2BP0DMW5 78 aa1.35□□□□□ -2.19
GYPB-201ENST00000429670 G6PCP35575 357 aa1.35□□□□□ -2.19
GYPB-201ENST00000429670 TPI1P60174 286 aa1.35□□□□□ -2.19
GYPB-201ENST00000429670 ZNF181Q2M3W8 571 aa1.35□□□□□ -2.19
GYPB-201ENST00000429670 LIN52Q52LA3 116 aa1.35□□□□□ -2.19
GYPB-201ENST00000429670 ANKRD29Q8N6D5 301 aa1.35□□□□□ -2.19
GYPB-201ENST00000429670 PACRGLQ8N7B6 248 aa1.35□□□□□ -2.19
GYPB-201ENST00000429670 GDPD1Q8N9F7 314 aa1.35□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms