RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 SSTR5P35346 364 aa16.46■□□□□ 0.23
SUDS3-204ENST00000543473 SRSF4Q08170 494 aaKnown RBP16.46■□□□□ 0.23
SUDS3-204ENST00000543473 BHLHA15Q7RTS1 189 aaPredicted RBP16.46■□□□□ 0.23
SUDS3-204ENST00000543473 PGLYRP4Q96LB8 373 aa16.46■□□□□ 0.23
SUDS3-204ENST00000543473 ZNF319Q9P2F9 582 aa16.46■□□□□ 0.23
SUDS3-204ENST00000543473 EP400Q96L91 3159 aa16.46■□□□□ 0.23
SUDS3-204ENST00000543473 ID3Q02535 119 aa16.46■□□□□ 0.22
SUDS3-204ENST00000543473 TTTY12Q9BZ98 90 aa16.46■□□□□ 0.22
SUDS3-204ENST00000543473 COX5BP10606 129 aa16.45■□□□□ 0.22
SUDS3-204ENST00000543473 SRSF9Q13242 221 aaKnown RBP eCLIP16.45■□□□□ 0.22
SUDS3-204ENST00000543473 TMEM106BQ9NUM4 274 aa16.45■□□□□ 0.22
SUDS3-204ENST00000543473 RRHO14718 337 aa16.45■□□□□ 0.22
SUDS3-204ENST00000543473 SERF1AO75920 110 aa16.45■□□□□ 0.22
SUDS3-204ENST00000543473 AMBPP02760 352 aa16.45■□□□□ 0.22
SUDS3-204ENST00000543473 GPX4P36969 197 aaPredicted RBP16.45■□□□□ 0.22
SUDS3-204ENST00000543473 ERVFRD-1P60508 538 aa16.45■□□□□ 0.22
SUDS3-204ENST00000543473 RTN4RQ9BZR6 473 aa16.45■□□□□ 0.22
SUDS3-204ENST00000543473 OR4C46A6NHA9 309 aa16.45■□□□□ 0.22
SUDS3-204ENST00000543473 TMEM177Q53S58 311 aa16.45■□□□□ 0.22
SUDS3-204ENST00000543473 VKORC1L1Q8N0U8 176 aa16.45■□□□□ 0.22
SUDS3-204ENST00000543473 HIGD1AQ9Y241 93 aa16.45■□□□□ 0.22
SUDS3-204ENST00000543473 SYNGR3O43761 229 aa16.44■□□□□ 0.22
SUDS3-204ENST00000543473 ST6GALNAC3Q8NDV1 305 aa16.44■□□□□ 0.22
SUDS3-204ENST00000543473 OR4D5Q8NGN0 318 aa16.44■□□□□ 0.22
SUDS3-204ENST00000543473 TMEM70Q9BUB7 260 aa16.44■□□□□ 0.22
SUDS3-204ENST00000543473 TMEM242Q9NWH2 141 aa16.44■□□□□ 0.22
SUDS3-204ENST00000543473 SIP14410 1827 aa16.44■□□□□ 0.22
SUDS3-204ENST00000543473 SCO2A0A1W2PP80 73 aa16.44■□□□□ 0.22
SUDS3-204ENST00000543473 SFXN3Q9BWM7 321 aa16.44■□□□□ 0.22
SUDS3-204ENST00000543473 FAM157AC9JC47 383 aa16.44■□□□□ 0.22
SUDS3-204ENST00000543473 NKX2-8O15522 239 aa16.44■□□□□ 0.22
SUDS3-204ENST00000543473 CLDN18P56856 261 aa16.44■□□□□ 0.22
SUDS3-204ENST00000543473 LRTM2Q8N967 370 aa16.44■□□□□ 0.22
SUDS3-204ENST00000543473 MYOZ3Q8TDC0 251 aa16.44■□□□□ 0.22
SUDS3-204ENST00000543473 IGKV1D-13A0A0B4J2D9 117 aa16.43■□□□□ 0.22
SUDS3-204ENST00000543473 F5H697 171 aa16.43■□□□□ 0.22
SUDS3-204ENST00000543473 IGKV1-13P0DP09 117 aa16.43■□□□□ 0.22
SUDS3-204ENST00000543473 TIMP4Q99727 224 aa16.43■□□□□ 0.22
SUDS3-204ENST00000543473 MRPL37Q9BZE1 423 aaKnown RBP16.43■□□□□ 0.22
SUDS3-204ENST00000543473 LAMTOR2Q9Y2Q5 125 aa16.43■□□□□ 0.22
SUDS3-204ENST00000543473 ARHGEF17Q96PE2 2063 aaPredicted RBP16.43■□□□□ 0.22
SUDS3-204ENST00000543473 ZSWIM8A7E2V4 1837 aa16.43■□□□□ 0.22
SUDS3-204ENST00000543473 SGK494Q96LW2 274 aa16.43■□□□□ 0.22
SUDS3-204ENST00000543473 CCL1P22362 96 aa16.43■□□□□ 0.22
SUDS3-204ENST00000543473 CHRNA10Q9GZZ6 450 aa16.43■□□□□ 0.22
SUDS3-204ENST00000543473 INSIG2Q9Y5U4 225 aa16.43■□□□□ 0.22
SUDS3-204ENST00000543473 TCF23Q7RTU1 214 aa16.42■□□□□ 0.22
SUDS3-204ENST00000543473 OR5P3Q8WZ94 311 aa16.42■□□□□ 0.22
SUDS3-204ENST00000543473 ZNF430Q9H8G1 570 aaPredicted RBP16.42■□□□□ 0.22
SUDS3-204ENST00000543473 STAG3L2P0CL84 134 aa16.42■□□□□ 0.22
SUDS3-204ENST00000543473 PSMB2P49721 201 aa16.42■□□□□ 0.22
SUDS3-204ENST00000543473 FLVCR1-AS1Q8TAF5 88 aa16.42■□□□□ 0.22
SUDS3-204ENST00000543473 VWA8A3KMH1 1905 aa16.42■□□□□ 0.22
SUDS3-204ENST00000543473 C1QTNF9BB2RNN3 333 aa16.42■□□□□ 0.22
SUDS3-204ENST00000543473 IL6RP08887 468 aaPredicted RBP16.42■□□□□ 0.22
SUDS3-204ENST00000543473 CD40P25942 277 aa16.42■□□□□ 0.22
SUDS3-204ENST00000543473 FOXA3P55318 350 aaPredicted RBP16.42■□□□□ 0.22
SUDS3-204ENST00000543473 RPL30P62888 115 aaKnown RBP16.42■□□□□ 0.22
SUDS3-204ENST00000543473 RPL8P62917 257 aaKnown RBP16.42■□□□□ 0.22
SUDS3-204ENST00000543473 C19orf24Q9BVV8 132 aa16.42■□□□□ 0.22
SUDS3-204ENST00000543473 CLEC5AQ9NY25 188 aa16.42■□□□□ 0.22
SUDS3-204ENST00000543473 ACACAQ13085 2346 aa16.42■□□□□ 0.22
SUDS3-204ENST00000543473 GCSHP23434 173 aa16.42■□□□□ 0.22
SUDS3-204ENST00000543473 OR51G1Q8NGK1 321 aa16.42■□□□□ 0.22
SUDS3-204ENST00000543473 DLL1O00548 723 aa16.41■□□□□ 0.22
SUDS3-204ENST00000543473 C1QTNF9P0C862 333 aa16.41■□□□□ 0.22
SUDS3-204ENST00000543473 CA7P43166 264 aa16.41■□□□□ 0.22
SUDS3-204ENST00000543473 FAM19A2Q8N3H0 131 aa16.41■□□□□ 0.22
SUDS3-204ENST00000543473 MTCL1Q9Y4B5 1905 aaKnown RBP16.41■□□□□ 0.22
SUDS3-204ENST00000543473 FAM90A27PA6NNH2 459 aa16.41■□□□□ 0.22
SUDS3-204ENST00000543473 KRTCAP3Q53RY4 240 aa16.41■□□□□ 0.22
SUDS3-204ENST00000543473 ZNF837Q96EG3 531 aaPredicted RBP16.41■□□□□ 0.22
SUDS3-204ENST00000543473 MDC1Q14676 2089 aaKnown RBP16.41■□□□□ 0.22
SUDS3-204ENST00000543473 RND2P52198 227 aa16.41■□□□□ 0.22
SUDS3-204ENST00000543473 MED12Q93074 2177 aa16.41■□□□□ 0.22
SUDS3-204ENST00000543473 A0A1B0GW64 132 aa16.41■□□□□ 0.22
SUDS3-204ENST00000543473 NUDT3O95989 172 aa16.41■□□□□ 0.22
SUDS3-204ENST00000543473 CGAP01215 116 aa16.41■□□□□ 0.22
SUDS3-204ENST00000543473 GNB2P62879 340 aa16.41■□□□□ 0.22
SUDS3-204ENST00000543473 ARTNQ5T4W7 220 aa16.41■□□□□ 0.22
SUDS3-204ENST00000543473 GCSAMQ8N6F7 178 aa16.41■□□□□ 0.22
SUDS3-204ENST00000543473 NRN1Q9NPD7 142 aa16.41■□□□□ 0.22
SUDS3-204ENST00000543473 PEF1Q9UBV8 284 aaKnown RBP16.41■□□□□ 0.22
SUDS3-204ENST00000543473 ATXN7O15265 892 aaPredicted RBP16.4■□□□□ 0.22
SUDS3-204ENST00000543473 PTGDSP41222 190 aa16.4■□□□□ 0.22
SUDS3-204ENST00000543473 GATAD1Q8WUU5 269 aa16.4■□□□□ 0.22
SUDS3-204ENST00000543473 LYZL4Q96KX0 146 aa16.4■□□□□ 0.22
SUDS3-204ENST00000543473 PRDM13Q9H4Q3 707 aa16.4■□□□□ 0.22
SUDS3-204ENST00000543473 HEATR5BQ9P2D3 2071 aa16.4■□□□□ 0.22
SUDS3-204ENST00000543473 TRAV9-1A0A075B6T8 112 aa16.4■□□□□ 0.22
SUDS3-204ENST00000543473 CEACAM3P40198 252 aa16.4■□□□□ 0.22
SUDS3-204ENST00000543473 HOXA4Q00056 320 aaPredicted RBP16.4■□□□□ 0.22
SUDS3-204ENST00000543473 MBD3L1Q8WWY6 194 aa16.4■□□□□ 0.22
SUDS3-204ENST00000543473 GUCD1Q96NT3 240 aa16.4■□□□□ 0.22
SUDS3-204ENST00000543473 CALYQ9NYX4 217 aa16.4■□□□□ 0.22
SUDS3-204ENST00000543473 HSPB7Q9UBY9 170 aa16.4■□□□□ 0.22
SUDS3-204ENST00000543473 OR10AG1Q8NH19 301 aa16.4■□□□□ 0.22
SUDS3-204ENST00000543473 NEU1Q99519 415 aa16.4■□□□□ 0.22
SUDS3-204ENST00000543473 TNFRSF19Q9NS68 423 aa16.4■□□□□ 0.22
SUDS3-204ENST00000543473 KLF7O75840 302 aaPredicted RBP16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 157.1 ms