RNA–Protein interactions for RNA: ENSMUST00000193839.5

Pcdha1-202, Transcript of Protocadherin alpha 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pcdha1, Length 4,925 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-202ENSMUST00000193839 Nudt3Q9JI46 168 aa12.15□□□□□ -0.46
Pcdha1-202ENSMUST00000193839 BC048679D3YXE9 172 aa12.15□□□□□ -0.46
Pcdha1-202ENSMUST00000193839 Ucp2P70406 309 aa12.15□□□□□ -0.46
Pcdha1-202ENSMUST00000193839 Cited1P97769 203 aa12.15□□□□□ -0.46
Pcdha1-202ENSMUST00000193839 Rasl12Q08AT1 266 aa12.15□□□□□ -0.46
Pcdha1-202ENSMUST00000193839 Tmem71Q149F5 287 aa12.15□□□□□ -0.46
Pcdha1-202ENSMUST00000193839 Q24JP4 165 aa12.15□□□□□ -0.46
Pcdha1-202ENSMUST00000193839 Nabp1Q8BGW5 198 aa12.15□□□□□ -0.46
Pcdha1-202ENSMUST00000193839 Olfr129Q8VEY1 330 aa12.15□□□□□ -0.46
Pcdha1-202ENSMUST00000193839 DapQ91XC8 102 aa12.15□□□□□ -0.46
Pcdha1-202ENSMUST00000193839 Mpc2Q9D023 127 aa12.15□□□□□ -0.46
Pcdha1-202ENSMUST00000193839 Zfhx2Q2MHN3 2562 aa12.14□□□□□ -0.47
Pcdha1-202ENSMUST00000193839 Gm10271F6WY25 52 aa12.14□□□□□ -0.47
Pcdha1-202ENSMUST00000193839 Mcpt9O35164 246 aa12.14□□□□□ -0.47
Pcdha1-202ENSMUST00000193839 Olfr1211Q7TR09 311 aa12.14□□□□□ -0.47
Pcdha1-202ENSMUST00000193839 Olfr137Q8VFC2 312 aa12.14□□□□□ -0.47
Pcdha1-202ENSMUST00000193839 Atp6v1fQ9D1K2 119 aa12.14□□□□□ -0.47
Pcdha1-202ENSMUST00000193839 Trav5-1A0A075B5Z7 114 aa12.14□□□□□ -0.47
Pcdha1-202ENSMUST00000193839 Trav12-2A0N8N6 114 aa12.14□□□□□ -0.47
Pcdha1-202ENSMUST00000193839 Gm6890A2BG94 208 aa12.14□□□□□ -0.47
Pcdha1-202ENSMUST00000193839 Klk1b3P00756 261 aa12.14□□□□□ -0.47
Pcdha1-202ENSMUST00000193839 P01746 140 aa12.14□□□□□ -0.47
Pcdha1-202ENSMUST00000193839 Tex52Q3TTI8 308 aa12.14□□□□□ -0.47
Pcdha1-202ENSMUST00000193839 Olfr917Q7TRC3 309 aa12.14□□□□□ -0.47
Pcdha1-202ENSMUST00000193839 ManbalQ9D8X0 85 aa12.14□□□□□ -0.47
Pcdha1-202ENSMUST00000193839 SmpxQ9DC77 85 aa12.14□□□□□ -0.47
Pcdha1-202ENSMUST00000193839 Rbfox1Q9JJ43 396 aa12.14□□□□□ -0.47
Pcdha1-202ENSMUST00000193839 Paqr4Q9JJE4 273 aa12.14□□□□□ -0.47
Pcdha1-202ENSMUST00000193839 GrprP21729 384 aa12.14□□□□□ -0.47
Pcdha1-202ENSMUST00000193839 Psg19Q4KL31 475 aa12.14□□□□□ -0.47
Pcdha1-202ENSMUST00000193839 Arg1Q61176 323 aa12.14□□□□□ -0.47
Pcdha1-202ENSMUST00000193839 Olfr493Q8VEW5 314 aa12.14□□□□□ -0.47
Pcdha1-202ENSMUST00000193839 Wdr77Q99J09 342 aa12.14□□□□□ -0.47
Pcdha1-202ENSMUST00000193839 4930444P10RikD3YUR1 185 aa12.14□□□□□ -0.47
Pcdha1-202ENSMUST00000193839 Vmn1r113G3UWI8 307 aa12.14□□□□□ -0.47
Pcdha1-202ENSMUST00000193839 Gm8677K9J7G9 307 aa12.14□□□□□ -0.47
Pcdha1-202ENSMUST00000193839 Rplp1P47955 114 aa12.14□□□□□ -0.47
Pcdha1-202ENSMUST00000193839 Gm5111Q8C9M4 190 aa12.14□□□□□ -0.47
Pcdha1-202ENSMUST00000193839 Dcaf12l1Q8CBW4 501 aa12.14□□□□□ -0.47
Pcdha1-202ENSMUST00000193839 Olfr829Q8VGX1 321 aa12.14□□□□□ -0.47
Pcdha1-202ENSMUST00000193839 Anapc16Q9CPV2 110 aa12.14□□□□□ -0.47
Pcdha1-202ENSMUST00000193839 Cst6Q9D1B1 149 aa12.14□□□□□ -0.47
Pcdha1-202ENSMUST00000193839 9230110F15RikQ9D262 117 aa12.14□□□□□ -0.47
Pcdha1-202ENSMUST00000193839 Slc25a22Q9D6M3 323 aa12.14□□□□□ -0.47
Pcdha1-202ENSMUST00000193839 Kif26aQ52KG5 1881 aa12.13□□□□□ -0.47
Pcdha1-202ENSMUST00000193839 Gm15056F6ZR08 88 aa12.13□□□□□ -0.47
Pcdha1-202ENSMUST00000193839 Atf6bO35451 699 aa12.13□□□□□ -0.47
Pcdha1-202ENSMUST00000193839 Tnfrsf17O88472 185 aa12.13□□□□□ -0.47
Pcdha1-202ENSMUST00000193839 Fut9O88819 359 aa12.13□□□□□ -0.47
Pcdha1-202ENSMUST00000193839 Ifna2P01573 190 aa12.13□□□□□ -0.47
Pcdha1-202ENSMUST00000193839 Foxr2Q3UM89 302 aa12.13□□□□□ -0.47
Pcdha1-202ENSMUST00000193839 Rph3alQ768S4 302 aa12.13□□□□□ -0.47
Pcdha1-202ENSMUST00000193839 Vmn1r222Q8R269 308 aa12.13□□□□□ -0.47
Pcdha1-202ENSMUST00000193839 Olfr1436A0PK57 315 aa12.13□□□□□ -0.47
Pcdha1-202ENSMUST00000193839 Gm9602J3QPD5 205 aa12.13□□□□□ -0.47
Pcdha1-202ENSMUST00000193839 SelenopP70274 380 aa12.13□□□□□ -0.47
Pcdha1-202ENSMUST00000193839 Q3U1D9 316 aa12.13□□□□□ -0.47
Pcdha1-202ENSMUST00000193839 Pnpla3Q91WW7 413 aa12.13□□□□□ -0.47
Pcdha1-202ENSMUST00000193839 6330409D20RikA2AK85 162 aa12.13□□□□□ -0.47
Pcdha1-202ENSMUST00000193839 Hes3Q61657 175 aa12.13□□□□□ -0.47
Pcdha1-202ENSMUST00000193839 Olfr901Q7TRD1 311 aa12.13□□□□□ -0.47
Pcdha1-202ENSMUST00000193839 ClmQ7TSN2 230 aa12.13□□□□□ -0.47
Pcdha1-202ENSMUST00000193839 Susd3Q9D176 269 aa12.13□□□□□ -0.47
Pcdha1-202ENSMUST00000193839 Arl13aQ9D416 372 aa12.13□□□□□ -0.47
Pcdha1-202ENSMUST00000193839 4933402D24RikQ9D4D3 167 aa12.13□□□□□ -0.47
Pcdha1-202ENSMUST00000193839 Cml1Q9JIZ0 222 aa12.13□□□□□ -0.47
Pcdha1-202ENSMUST00000193839 Prg4Q9JM99 1054 aa12.13□□□□□ -0.47
Pcdha1-202ENSMUST00000193839 Pard6aQ9Z101 346 aa12.13□□□□□ -0.47
Pcdha1-202ENSMUST00000193839 Trav13d-3J3QMG8 112 aa12.13□□□□□ -0.47
Pcdha1-202ENSMUST00000193839 Tmem178bM0QWJ9 172 aa12.13□□□□□ -0.47
Pcdha1-202ENSMUST00000193839 Pdcd6P12815 191 aaKnown RBP12.13□□□□□ -0.47
Pcdha1-202ENSMUST00000193839 Fgf7P36363 194 aa12.13□□□□□ -0.47
Pcdha1-202ENSMUST00000193839 Dll1Q61483 722 aa12.13□□□□□ -0.47
Pcdha1-202ENSMUST00000193839 Klk1b21Q61759 261 aa12.13□□□□□ -0.47
Pcdha1-202ENSMUST00000193839 BckdhbQ6P3A8 390 aa12.13□□□□□ -0.47
Pcdha1-202ENSMUST00000193839 AtcayQ8BHE3 372 aa12.13□□□□□ -0.47
Pcdha1-202ENSMUST00000193839 GmppaQ922H4 420 aa12.13□□□□□ -0.47
Pcdha1-202ENSMUST00000193839 Olfr934Q9EQ87 310 aa12.13□□□□□ -0.47
Pcdha1-202ENSMUST00000193839 Ctxnd2A0A1B0GQX3 59 aa12.12□□□□□ -0.47
Pcdha1-202ENSMUST00000193839 Olfr1320A2AHM8 319 aa12.12□□□□□ -0.47
Pcdha1-202ENSMUST00000193839 UcnP81615 122 aa12.12□□□□□ -0.47
Pcdha1-202ENSMUST00000193839 Smim15Q3UTD9 74 aa12.12□□□□□ -0.47
Pcdha1-202ENSMUST00000193839 Olfr987Q7TRA2 309 aa12.12□□□□□ -0.47
Pcdha1-202ENSMUST00000193839 Paqr8Q80ZE5 354 aa12.12□□□□□ -0.47
Pcdha1-202ENSMUST00000193839 Rpp21Q8R040 150 aa12.12□□□□□ -0.47
Pcdha1-202ENSMUST00000193839 B3GNT2Q9Z222 397 aa12.12□□□□□ -0.47
Pcdha1-202ENSMUST00000193839 Olfr1438-ps1A0A140LHS9 319 aa12.12□□□□□ -0.47
Pcdha1-202ENSMUST00000193839 Olfr282A1L1B4 308 aa12.12□□□□□ -0.47
Pcdha1-202ENSMUST00000193839 Smim6Q3U0I6 56 aa12.12□□□□□ -0.47
Pcdha1-202ENSMUST00000193839 Tmem158Q6F5E0 286 aa12.12□□□□□ -0.47
Pcdha1-202ENSMUST00000193839 Vash2Q8C5G2 355 aa12.12□□□□□ -0.47
Pcdha1-202ENSMUST00000193839 Cmc2Q8K199 79 aa12.12□□□□□ -0.47
Pcdha1-202ENSMUST00000193839 4930412O13RikQ9D5M9 106 aa12.12□□□□□ -0.47
Pcdha1-202ENSMUST00000193839 Anxa10Q9QZ10 324 aa12.12□□□□□ -0.47
Pcdha1-202ENSMUST00000193839 Rnf212bD3Z423 297 aa12.12□□□□□ -0.47
Pcdha1-202ENSMUST00000193839 Vmn1r160E9Q346 307 aa12.12□□□□□ -0.47
Pcdha1-202ENSMUST00000193839 Vmn1r123L7N270 307 aa12.12□□□□□ -0.47
Pcdha1-202ENSMUST00000193839 Shc1P98083 579 aa12.12□□□□□ -0.47
Pcdha1-202ENSMUST00000193839 Vax1Q2NKI2 338 aa12.12□□□□□ -0.47
Pcdha1-202ENSMUST00000193839 Mtch1Q791T5 389 aa12.12□□□□□ -0.47
Retrieved 100 of 22,080 RNA–protein pairs in 40.6 ms