Protein–RNA interactions for Protein: Q9JJ43

Rbfox1, RNA binding protein fox-1 homolog 1, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbfox1Q9JJ43 Gm25239-201ENSMUST00000174915 86 ntBASIC29.92■■■□□ 2.38
Rbfox1Q9JJ43 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
Rbfox1Q9JJ43 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
Rbfox1Q9JJ43 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC28.4■■■□□ 2.14
Rbfox1Q9JJ43 Psd-208ENSMUST00000224556 2034 ntBASIC27.39■■□□□ 1.98
Rbfox1Q9JJ43 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
Rbfox1Q9JJ43 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Rbfox1Q9JJ43 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Rbfox1Q9JJ43 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Rbfox1Q9JJ43 Gm15042-201ENSMUST00000120212 883 ntBASIC26.9■■□□□ 1.9
Rbfox1Q9JJ43 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC26.77■■□□□ 1.88
Rbfox1Q9JJ43 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Rbfox1Q9JJ43 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Rbfox1Q9JJ43 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC26.42■■□□□ 1.82
Rbfox1Q9JJ43 Gm15045-201ENSMUST00000117359 883 ntBASIC26.4■■□□□ 1.82
Rbfox1Q9JJ43 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Rbfox1Q9JJ43 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Rbfox1Q9JJ43 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Rbfox1Q9JJ43 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC26.02■■□□□ 1.76
Rbfox1Q9JJ43 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Rbfox1Q9JJ43 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Rbfox1Q9JJ43 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC25.71■■□□□ 1.71
Rbfox1Q9JJ43 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC25.71■■□□□ 1.71
Rbfox1Q9JJ43 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
Rbfox1Q9JJ43 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Rbfox1Q9JJ43 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
Rbfox1Q9JJ43 Gm24109-201ENSMUST00000175489 103 ntBASIC25.6■■□□□ 1.69
Rbfox1Q9JJ43 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC25.58■■□□□ 1.68
Rbfox1Q9JJ43 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC25.54■■□□□ 1.68
Rbfox1Q9JJ43 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
Rbfox1Q9JJ43 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Rbfox1Q9JJ43 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Rbfox1Q9JJ43 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Rbfox1Q9JJ43 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Rbfox1Q9JJ43 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC25.24■■□□□ 1.63
Rbfox1Q9JJ43 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
Rbfox1Q9JJ43 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
Rbfox1Q9JJ43 Gm23366-201ENSMUST00000175022 89 ntBASIC25.16■■□□□ 1.62
Rbfox1Q9JJ43 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC25.15■■□□□ 1.62
Rbfox1Q9JJ43 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC25.15■■□□□ 1.62
Rbfox1Q9JJ43 Gm10524-201ENSMUST00000181931 1893 ntBASIC25.07■■□□□ 1.6
Rbfox1Q9JJ43 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Rbfox1Q9JJ43 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Rbfox1Q9JJ43 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC25.01■■□□□ 1.59
Rbfox1Q9JJ43 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Rbfox1Q9JJ43 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Rbfox1Q9JJ43 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Rbfox1Q9JJ43 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
Rbfox1Q9JJ43 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC24.72■■□□□ 1.55
Rbfox1Q9JJ43 AC153911.1-202ENSMUST00000218534 1034 ntBASIC24.65■■□□□ 1.54
Rbfox1Q9JJ43 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Rbfox1Q9JJ43 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Rbfox1Q9JJ43 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Rbfox1Q9JJ43 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Rbfox1Q9JJ43 CT025624.2-201ENSMUST00000223609 1909 ntBASIC24.38■■□□□ 1.49
Rbfox1Q9JJ43 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Rbfox1Q9JJ43 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Rbfox1Q9JJ43 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC24.34■■□□□ 1.49
Rbfox1Q9JJ43 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC24.33■■□□□ 1.49
Rbfox1Q9JJ43 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
Rbfox1Q9JJ43 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
Rbfox1Q9JJ43 Gm42596-201ENSMUST00000196305 1958 ntBASIC24.26■■□□□ 1.47
Rbfox1Q9JJ43 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC24.19■■□□□ 1.46
Rbfox1Q9JJ43 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Rbfox1Q9JJ43 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC24.16■■□□□ 1.46
Rbfox1Q9JJ43 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC24.15■■□□□ 1.46
Rbfox1Q9JJ43 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Rbfox1Q9JJ43 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Rbfox1Q9JJ43 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC24.07■■□□□ 1.44
Rbfox1Q9JJ43 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Rbfox1Q9JJ43 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Rbfox1Q9JJ43 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC23.99■■□□□ 1.43
Rbfox1Q9JJ43 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Rbfox1Q9JJ43 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
Rbfox1Q9JJ43 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.42
Rbfox1Q9JJ43 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Rbfox1Q9JJ43 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Rbfox1Q9JJ43 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC23.84■■□□□ 1.41
Rbfox1Q9JJ43 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Rbfox1Q9JJ43 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Rbfox1Q9JJ43 Gm27325-201ENSMUST00000175467 74 ntBASIC23.72■■□□□ 1.39
Rbfox1Q9JJ43 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Rbfox1Q9JJ43 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
Rbfox1Q9JJ43 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Rbfox1Q9JJ43 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Rbfox1Q9JJ43 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Rbfox1Q9JJ43 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Rbfox1Q9JJ43 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Rbfox1Q9JJ43 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Rbfox1Q9JJ43 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC23.54■■□□□ 1.36
Rbfox1Q9JJ43 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Rbfox1Q9JJ43 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
Rbfox1Q9JJ43 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Rbfox1Q9JJ43 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Rbfox1Q9JJ43 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Rbfox1Q9JJ43 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Rbfox1Q9JJ43 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Rbfox1Q9JJ43 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC23.38■■□□□ 1.33
Rbfox1Q9JJ43 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC23.37■■□□□ 1.33
Rbfox1Q9JJ43 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC23.37■■□□□ 1.33
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms