RNA–Protein interactions for RNA: YPR110C

RPC40, Transcript of RNA polymerase subunit AC40, yeastyeast

Gene RPC40, Length 1,008 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPC40YPR110C MNT2P53059 558 aa3.69□□□□□ -1.82
RPC40YPR110C TRI1Q05024 226 aa3.69□□□□□ -1.82
RPC40YPR110C YFT2Q06676 274 aa3.69□□□□□ -1.82
RPC40YPR110C ARP7Q12406 477 aa3.69□□□□□ -1.82
RPC40YPR110C ZRT2Q12436 422 aa3.69□□□□□ -1.82
RPC40YPR110C TUF1P02992 437 aaKnown RBP3.68□□□□□ -1.82
RPC40YPR110C SEC15P22224 910 aa3.68□□□□□ -1.82
RPC40YPR110C PHO3P24031 467 aa3.68□□□□□ -1.82
RPC40YPR110C MVD1P32377 396 aaKnown RBP3.68□□□□□ -1.82
RPC40YPR110C PET309P32522 965 aaPredicted RBP3.68□□□□□ -1.82
RPC40YPR110C TRM2P33753 639 aa3.68□□□□□ -1.82
RPC40YPR110C COS111P38308 924 aa3.68□□□□□ -1.82
RPC40YPR110C HRB1P38922 454 aaKnown RBP RIP-Chip data3.68□□□□□ -1.82not detected
RPC40YPR110C SAW1P39735 261 aa3.68□□□□□ -1.82
RPC40YPR110C YIL077CP40508 320 aa3.68□□□□□ -1.82
RPC40YPR110C YDL183CP48569 320 aa3.68□□□□□ -1.82
RPC40YPR110C PAN2P53010 1115 aaPredicted RBP3.68□□□□□ -1.82
RPC40YPR110C FHN1P53279 174 aa3.68□□□□□ -1.82
RPC40YPR110C YAP1802P53309 568 aa3.68□□□□□ -1.82
RPC40YPR110C ATG16Q03818 150 aa3.68□□□□□ -1.82
RPC40YPR110C CHS5Q12114 671 aaKnown RBP3.68□□□□□ -1.82
RPC40YPR110C YOL114CQ12322 202 aa3.68□□□□□ -1.82
RPC40YPR110C YKL033W-AQ86ZR7 236 aa3.68□□□□□ -1.82
RPC40YPR110C RPS9BP05755 195 aaKnown RBP3.67□□□□□ -1.82
RPC40YPR110C VAS1P07806 1104 aaKnown RBP3.67□□□□□ -1.82
RPC40YPR110C MSS1P32559 526 aaPredicted RBP3.67□□□□□ -1.82
RPC40YPR110C HIS7P33734 552 aaKnown RBP3.67□□□□□ -1.82
RPC40YPR110C TAF5P38129 798 aa3.67□□□□□ -1.82
RPC40YPR110C CRG1P38892 291 aaRIP-Chip data3.67□□□□□ -1.82not detected
RPC40YPR110C GIP4P39732 760 aa3.67□□□□□ -1.82
RPC40YPR110C ACA1P39970 489 aa3.67□□□□□ -1.82
RPC40YPR110C SCS2P40075 244 aaKnown RBP3.67□□□□□ -1.82
RPC40YPR110C FTR1P40088 404 aa3.67□□□□□ -1.82
RPC40YPR110C RFX1P48743 811 aa3.67□□□□□ -1.82
RPC40YPR110C TAN1P53072 289 aaPredicted RBP3.67□□□□□ -1.82
RPC40YPR110C YGR021WP53212 290 aa3.67□□□□□ -1.82
RPC40YPR110C YNR071CP53757 342 aa3.67□□□□□ -1.82
RPC40YPR110C TEP1P53916 434 aa3.67□□□□□ -1.82
RPC40YPR110C YCG1Q06680 1035 aa3.67□□□□□ -1.82
RPC40YPR110C YOL073CQ08232 322 aa3.67□□□□□ -1.82
RPC40YPR110C NUR1Q12066 484 aa3.67□□□□□ -1.82
RPC40YPR110C ADH4P10127 382 aa3.66□□□□□ -1.82
RPC40YPR110C PRP45P28004 379 aaPredicted RBP3.66□□□□□ -1.82
RPC40YPR110C PTH2P34222 208 aa3.66□□□□□ -1.82
RPC40YPR110C PHO11P35842 467 aa3.66□□□□□ -1.82
RPC40YPR110C FUI1P38196 639 aa3.66□□□□□ -1.82
RPC40YPR110C SUL1P38359 859 aa3.66□□□□□ -1.82
RPC40YPR110C PHO12P38693 467 aa3.66□□□□□ -1.82
RPC40YPR110C YLF2P38746 405 aa3.66□□□□□ -1.82
RPC40YPR110C SFB3P38810 929 aa3.66□□□□□ -1.82
RPC40YPR110C TAH11P47112 604 aa3.66□□□□□ -1.82
RPC40YPR110C UBA2P52488 636 aa3.66□□□□□ -1.82
RPC40YPR110C TEL2P53038 688 aa3.66□□□□□ -1.82
RPC40YPR110C RIA1P53893 1110 aa3.66□□□□□ -1.82
RPC40YPR110C KIN4Q01919 800 aa3.66□□□□□ -1.82
RPC40YPR110C CEF1Q03654 590 aaPredicted RBP3.66□□□□□ -1.82
RPC40YPR110C ARR3Q06598 404 aa3.66□□□□□ -1.82
RPC40YPR110C AIM41Q12032 185 aa3.66□□□□□ -1.82
RPC40YPR110C MLH3Q12083 715 aa3.66□□□□□ -1.82
RPC40YPR110C DBP10Q12389 995 aaKnown RBP3.66□□□□□ -1.82
RPC40YPR110C URA3P03962 267 aa3.65□□□□□ -1.83
RPC40YPR110C TUP1P16649 713 aa3.65□□□□□ -1.83
RPC40YPR110C THR1P17423 357 aaKnown RBP3.65□□□□□ -1.83
RPC40YPR110C NTH1P32356 751 aa3.65□□□□□ -1.83
RPC40YPR110C PPS1P38148 807 aa3.65□□□□□ -1.83
RPC40YPR110C CTP1P38152 299 aa3.65□□□□□ -1.83
RPC40YPR110C SWD1P39706 426 aa3.65□□□□□ -1.83
RPC40YPR110C KHA1P40309 873 aa3.65□□□□□ -1.83
RPC40YPR110C MPS3P47069 682 aa3.65□□□□□ -1.83
RPC40YPR110C SQS1P53866 767 aaKnown RBP3.65□□□□□ -1.83
RPC40YPR110C PSR2Q07949 397 aa3.65□□□□□ -1.83
RPC40YPR110C IZH3Q07959 543 aa3.65□□□□□ -1.83
RPC40YPR110C PHO81P17442 1178 aa3.64□□□□□ -1.83
RPC40YPR110C CBP3P21560 335 aa3.64□□□□□ -1.83
RPC40YPR110C ARG1P22768 420 aa3.64□□□□□ -1.83
RPC40YPR110C DPB3P27344 201 aa3.64□□□□□ -1.83
RPC40YPR110C CHS7P38843 316 aa3.64□□□□□ -1.83
RPC40YPR110C RPT2P40327 437 aaKnown RBP3.64□□□□□ -1.83
RPC40YPR110C LRO1P40345 661 aa3.64□□□□□ -1.83
RPC40YPR110C AIM21P40563 679 aa3.64□□□□□ -1.83
RPC40YPR110C IMA5P40884 581 aa3.64□□□□□ -1.83
RPC40YPR110C MAD3P47074 515 aa3.64□□□□□ -1.83
RPC40YPR110C SUN4P53616 420 aa3.64□□□□□ -1.83
RPC40YPR110C ATG4P53867 494 aa3.64□□□□□ -1.83
RPC40YPR110C EIS1Q05050 843 aaKnown RBP3.64□□□□□ -1.83
RPC40YPR110C PUS9Q12069 462 aa3.64□□□□□ -1.83
RPC40YPR110C HOS1Q12214 470 aa3.64□□□□□ -1.83
RPC40YPR110C VPS33P20795 691 aa3.63□□□□□ -1.83
RPC40YPR110C MSM1P22438 575 aa3.63□□□□□ -1.83
RPC40YPR110C TRX2P22803 104 aaKnown RBP3.63□□□□□ -1.83
RPC40YPR110C MSH1P25846 959 aa3.63□□□□□ -1.83
RPC40YPR110C EHT1P38295 451 aa3.63□□□□□ -1.83
RPC40YPR110C YHL017WP38745 532 aa3.63□□□□□ -1.83
RPC40YPR110C TMN3P40071 706 aa3.63□□□□□ -1.83
RPC40YPR110C VPS27P40343 622 aaKnown RBP3.63□□□□□ -1.83
RPC40YPR110C GSM1P42950 618 aa3.63□□□□□ -1.83
RPC40YPR110C MSE1P48525 536 aa3.63□□□□□ -1.83
RPC40YPR110C YGR054WP53235 642 aaKnown RBP3.63□□□□□ -1.83
RPC40YPR110C SMX3P54999 86 aaPredicted RBP3.63□□□□□ -1.83
RPC40YPR110C SSL2Q00578 843 aa3.63□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 138.1 ms