RNA–Protein interactions for RNA: YPR088C

SRP54, Transcript of Signal recognition particle (SRP) subunit (homolog of mammalian SRP54), yeastyeast

Gene SRP54, Length 1,626 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRP54YPR088C ATP1P07251 545 aaKnown RBP8.69□□□□□ -1.02
SRP54YPR088C MEI4P29467 408 aa8.69□□□□□ -1.02
SRP54YPR088C MET4P32389 672 aa8.69□□□□□ -1.02
SRP54YPR088C HSL7P38274 827 aa8.69□□□□□ -1.02
SRP54YPR088C AVT2P39981 480 aa8.69□□□□□ -1.02
SRP54YPR088C JHD1P40034 492 aa8.69□□□□□ -1.02
SRP54YPR088C YJL045WP47052 634 aa8.69□□□□□ -1.02
SRP54YPR088C HLJ1P48353 224 aa8.69□□□□□ -1.02
SRP54YPR088C YGR283CP53336 341 aaPredicted RBP8.69□□□□□ -1.02
SRP54YPR088C YML083CQ04526 418 aa8.69□□□□□ -1.02
SRP54YPR088C PRM6Q04705 352 aa8.69□□□□□ -1.02
SRP54YPR088C MRN1Q08925 612 aaKnown RBP RIP-Chip data8.69□□□□□ -1.02not detected
SRP54YPR088C THI21Q08975 551 aa8.69□□□□□ -1.02
SRP54YPR088C SPO16P17122 198 aa8.68□□□□□ -1.02
SRP54YPR088C SLY1P22213 666 aa8.68□□□□□ -1.02
SRP54YPR088C PLC1P32383 869 aa8.68□□□□□ -1.02
SRP54YPR088C RFS1P38234 210 aaKnown RBP8.68□□□□□ -1.02
SRP54YPR088C RGD1P38339 666 aa8.68□□□□□ -1.02
SRP54YPR088C MVP1P40959 511 aaKnown RBP8.68□□□□□ -1.02
SRP54YPR088C YFL052WP43551 465 aa8.68□□□□□ -1.02
SRP54YPR088C TAF1P46677 1066 aa8.68□□□□□ -1.02
SRP54YPR088C YJR039WP47107 1121 aa8.68□□□□□ -1.02
SRP54YPR088C ADA2Q02336 434 aa8.68□□□□□ -1.02
SRP54YPR088C RKM2Q03942 479 aa8.68□□□□□ -1.02
SRP54YPR088C MRI1Q06489 411 aaKnown RBP8.68□□□□□ -1.02
SRP54YPR088C DDC1Q08949 612 aa8.68□□□□□ -1.02
SRP54YPR088C APM4Q99186 491 aa8.68□□□□□ -1.02
SRP54YPR088C YML002WP0CF17 737 aa8.67□□□□□ -1.02
SRP54YPR088C PEP5P12868 1029 aa8.67□□□□□ -1.02
SRP54YPR088C PEP7P32609 515 aa8.67□□□□□ -1.02
SRP54YPR088C YBR053CP38235 358 aa8.67□□□□□ -1.02
SRP54YPR088C POP4P38336 279 aa8.67□□□□□ -1.02
SRP54YPR088C FLC2P39719 783 aa8.67□□□□□ -1.02
SRP54YPR088C INA22P40576 216 aa8.67□□□□□ -1.02
SRP54YPR088C CDC1P40986 491 aa8.67□□□□□ -1.02
SRP54YPR088C RGD2P43556 714 aa8.67□□□□□ -1.02
SRP54YPR088C ACM1Q08981 209 aa8.67□□□□□ -1.02
SRP54YPR088C FAP7Q12055 197 aaPredicted RBP8.67□□□□□ -1.02
SRP54YPR088C HRT3Q12347 344 aa8.67□□□□□ -1.02
SRP54YPR088C TAO3P40468 2376 aa8.67□□□□□ -1.02
SRP54YPR088C UBR2Q07963 1872 aa8.66□□□□□ -1.02
SRP54YPR088C YLR422WQ06409 1932 aa8.66□□□□□ -1.02
SRP54YPR088C RAD1P06777 1100 aa8.66□□□□□ -1.02
SRP54YPR088C GCS1P35197 352 aa8.66□□□□□ -1.02
SRP54YPR088C PRK1P40494 810 aa8.66□□□□□ -1.02
SRP54YPR088C RSC8P43609 557 aaKnown RBP8.66□□□□□ -1.02
SRP54YPR088C GUF1P46943 645 aa8.66□□□□□ -1.02
SRP54YPR088C ATG36P46983 293 aa8.66□□□□□ -1.02
SRP54YPR088C STE23Q06010 1027 aa8.66□□□□□ -1.02
SRP54YPR088C YDL073WQ07454 984 aa8.66□□□□□ -1.02
SRP54YPR088C LEA1Q08963 238 aaPredicted RBP8.66□□□□□ -1.02
SRP54YPR088C GCR1P07261 785 aa8.65□□□□□ -1.02
SRP54YPR088C YCR015CP25616 317 aa8.65□□□□□ -1.02
SRP54YPR088C GPI10P30777 616 aa8.65□□□□□ -1.02
SRP54YPR088C ECM32P32644 1121 aaKnown RBP8.65□□□□□ -1.02
SRP54YPR088C RPC37P36121 282 aa8.65□□□□□ -1.02
SRP54YPR088C MSC7P38694 644 aa8.65□□□□□ -1.02
SRP54YPR088C NMD3P38861 518 aaKnown RBP8.65□□□□□ -1.02
SRP54YPR088C CIN4P39110 191 aa8.65□□□□□ -1.02
SRP54YPR088C FHL1P39521 936 aa8.65□□□□□ -1.02
SRP54YPR088C SAW1P39735 261 aa8.65□□□□□ -1.02
SRP54YPR088C MKT1P40850 830 aaKnown RBP8.65□□□□□ -1.02
SRP54YPR088C VTC4P47075 721 aa8.65□□□□□ -1.02
SRP54YPR088C VPS25P47142 202 aa8.65□□□□□ -1.02
SRP54YPR088C PEX31P53203 462 aa8.65□□□□□ -1.02
SRP54YPR088C PNG1Q02890 363 aa8.65□□□□□ -1.02
SRP54YPR088C SND1Q04007 877 aa8.65□□□□□ -1.02
SRP54YPR088C EMI2Q04409 500 aaKnown RBP8.65□□□□□ -1.02
SRP54YPR088C SEY1Q99287 776 aa8.65□□□□□ -1.02
SRP54YPR088C IZH4Q99393 312 aa8.65□□□□□ -1.02
SRP54YPR088C PRC1P00729 532 aa8.65□□□□□ -1.03
SRP54YPR088C ADH4P10127 382 aa8.65□□□□□ -1.03
SRP54YPR088C RGR1P19263 1082 aa8.65□□□□□ -1.03
SRP54YPR088C YME1P32795 747 aa8.65□□□□□ -1.03
SRP54YPR088C MMF1P40185 145 aaKnown RBP8.65□□□□□ -1.03
SRP54YPR088C ALY2P47029 1046 aa8.65□□□□□ -1.03
SRP54YPR088C RNT1Q02555 471 aa8.65□□□□□ -1.03
SRP54YPR088C HRD3Q05787 833 aa8.65□□□□□ -1.03
SRP54YPR088C TPO1Q07824 586 aa8.65□□□□□ -1.03
SRP54YPR088C HIP1P06775 603 aa8.64□□□□□ -1.03
SRP54YPR088C CBF1P17106 351 aa8.64□□□□□ -1.03
SRP54YPR088C PEX2P32800 271 aa8.64□□□□□ -1.03
SRP54YPR088C YBR056WP38081 501 aa8.64□□□□□ -1.03
SRP54YPR088C DUG2P38149 878 aa8.64□□□□□ -1.03
SRP54YPR088C SAP1P39955 897 aaKnown RBP8.64□□□□□ -1.03
SRP54YPR088C MET13P53128 600 aa8.64□□□□□ -1.03
SRP54YPR088C CPR6P53691 371 aaKnown RBP8.64□□□□□ -1.03
SRP54YPR088C BET4Q00618 327 aa8.64□□□□□ -1.03
SRP54YPR088C AIM32Q04689 311 aa8.64□□□□□ -1.03
SRP54YPR088C RUD3Q12234 484 aaKnown RBP8.64□□□□□ -1.03
SRP54YPR088C CCP1P00431 361 aa8.63□□□□□ -1.03
SRP54YPR088C MAS1P10507 462 aa8.63□□□□□ -1.03
SRP54YPR088C CDC24P11433 854 aaPredicted RBP8.63□□□□□ -1.03
SRP54YPR088C MGT1P26188 188 aa8.63□□□□□ -1.03
SRP54YPR088C RAD27P26793 382 aa8.63□□□□□ -1.03
SRP54YPR088C DSS4P32601 143 aa8.63□□□□□ -1.03
SRP54YPR088C SIF2P38262 535 aa8.63□□□□□ -1.03
SRP54YPR088C DIA4P38705 446 aaPredicted RBP8.63□□□□□ -1.03
SRP54YPR088C SSP1P38871 571 aa8.63□□□□□ -1.03
SRP54YPR088C CTK3P46963 296 aaPredicted RBP8.63□□□□□ -1.03
Retrieved 100 of 5,963 RNA–protein pairs in 17.2 ms