RNA–Protein interactions for RNA: YPL166W

ATG29, Transcript of Autophagy-specific protein, yeast

Gene ATG29, Length 642 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG29	YPL166W	SKY1	Q03656	742 aa		5.29	□□□□□ -1.56
ATG29	YPL166W	HOF1	Q05080	669 aa		5.29	□□□□□ -1.56
ATG29	YPL166W	THI7	Q05998	598 aa		5.29	□□□□□ -1.56
ATG29	YPL166W	CDC26	P14724	124 aa		5.28	□□□□□ -1.56
ATG29	YPL166W	DGR2	P32330	852 aa		5.28	□□□□□ -1.56
ATG29	YPL166W	YBR071W	P38243	211 aa		5.28	□□□□□ -1.56
ATG29	YPL166W	YHR097C	P38809	366 aa	Known RBP	5.28	□□□□□ -1.56
ATG29	YPL166W	YSH1	Q06224	779 aa	Predicted RBP	5.28	□□□□□ -1.56
ATG29	YPL166W	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	5.28	□□□□□ -1.56	not detected
ATG29	YPL166W	ACO1	P19414	778 aa	Known RBP RIP-Chip data	5.27	□□□□□ -1.57	not detected
ATG29	YPL166W	PRE4	P30657	266 aa		5.27	□□□□□ -1.57
ATG29	YPL166W	MF(ALPHA)2	P32435	120 aa		5.27	□□□□□ -1.57
ATG29	YPL166W	MSS1	P32559	526 aa	Predicted RBP	5.27	□□□□□ -1.57
ATG29	YPL166W	SER1	P33330	395 aa	Known RBP	5.27	□□□□□ -1.57
ATG29	YPL166W	GMH1	P36125	273 aa		5.27	□□□□□ -1.57
ATG29	YPL166W	YHR033W	P38690	423 aa		5.27	□□□□□ -1.57
ATG29	YPL166W	KSP1	P38691	1029 aa	Known RBP	5.27	□□□□□ -1.57
ATG29	YPL166W	NIT2	P47016	307 aa		5.27	□□□□□ -1.57
ATG29	YPL166W	YJR120W	P47157	116 aa		5.27	□□□□□ -1.57
ATG29	YPL166W	AFT2	Q08957	416 aa		5.27	□□□□□ -1.57
ATG29	YPL166W	SSB1	P11484	613 aa	Known RBP	5.26	□□□□□ -1.57
ATG29	YPL166W	APL3	P38065	1025 aa		5.26	□□□□□ -1.57
ATG29	YPL166W	YEL020C	P39994	560 aa		5.26	□□□□□ -1.57
ATG29	YPL166W	TMN3	P40071	706 aa		5.26	□□□□□ -1.57
ATG29	YPL166W	SSB2	P40150	613 aa	Known RBP	5.26	□□□□□ -1.57
ATG29	YPL166W	SPC105	P53148	917 aa		5.26	□□□□□ -1.57
ATG29	YPL166W	NMA2	P53204	395 aa		5.26	□□□□□ -1.57
ATG29	YPL166W	IZH3	Q07959	543 aa		5.26	□□□□□ -1.57
ATG29	YPL166W	KCC4	P25389	1037 aa		5.25	□□□□□ -1.57
ATG29	YPL166W	HXT4	P32467	576 aa		5.25	□□□□□ -1.57
ATG29	YPL166W	PAF1	P38351	445 aa		5.25	□□□□□ -1.57
ATG29	YPL166W	CRG1	P38892	291 aa	RIP-Chip data	5.25	□□□□□ -1.57	not detected
ATG29	YPL166W	PRM2	P40534	656 aa		5.25	□□□□□ -1.57
ATG29	YPL166W	SPC98	P53540	846 aa		5.25	□□□□□ -1.57
ATG29	YPL166W	FDC1	Q03034	503 aa		5.25	□□□□□ -1.57
ATG29	YPL166W	NGL1	Q08213	363 aa	Known RBP	5.25	□□□□□ -1.57
ATG29	YPL166W	BMS1	Q08965	1183 aa	Known RBP	5.25	□□□□□ -1.57
ATG29	YPL166W	RPN13	O13563	156 aa		5.24	□□□□□ -1.57
ATG29	YPL166W	ATP12	P22135	325 aa		5.24	□□□□□ -1.57
ATG29	YPL166W	MRC1	P25588	1096 aa		5.24	□□□□□ -1.57
ATG29	YPL166W	FTR1	P40088	404 aa		5.24	□□□□□ -1.57
ATG29	YPL166W	SLD3	P53135	668 aa		5.24	□□□□□ -1.57
ATG29	YPL166W	DIP5	P53388	608 aa		5.24	□□□□□ -1.57
ATG29	YPL166W	COG6	P53959	839 aa		5.24	□□□□□ -1.57
ATG29	YPL166W	HLR1	Q04429	423 aa		5.24	□□□□□ -1.57
ATG29	YPL166W	RKI1	Q12189	258 aa		5.24	□□□□□ -1.57
ATG29	YPL166W	LAM4	P38800	1345 aa		5.23	□□□□□ -1.57
ATG29	YPL166W	TUP1	P16649	713 aa		5.23	□□□□□ -1.57
ATG29	YPL166W	COX11	P19516	300 aa	Known RBP	5.23	□□□□□ -1.57
ATG29	YPL166W	ELF1	P36053	145 aa		5.23	□□□□□ -1.57
ATG29	YPL166W	CDS1	P38221	457 aa		5.23	□□□□□ -1.57
ATG29	YPL166W	PEA2	P40091	420 aa		5.23	□□□□□ -1.57
ATG29	YPL166W	UFO1	Q04511	668 aa		5.23	□□□□□ -1.57
ATG29	YPL166W	AIM41	Q12032	185 aa		5.23	□□□□□ -1.57
ATG29	YPL166W	SRP68	P38687	599 aa	Known RBP	5.22	□□□□□ -1.57
ATG29	YPL166W	EMP65	P40085	556 aa		5.22	□□□□□ -1.57
ATG29	YPL166W	FOL1	P53848	824 aa		5.22	□□□□□ -1.57
ATG29	YPL166W	KAR1	P11927	433 aa		5.21	□□□□□ -1.58
ATG29	YPL166W	HEM12	P32347	362 aa	Predicted RBP	5.21	□□□□□ -1.58
ATG29	YPL166W	MTC7	P32633	139 aa		5.21	□□□□□ -1.58
ATG29	YPL166W	PPE1	P38796	400 aa		5.21	□□□□□ -1.58
ATG29	YPL166W	SNF12	P53628	566 aa		5.21	□□□□□ -1.58
ATG29	YPL166W	SQS1	P53866	767 aa	Known RBP	5.21	□□□□□ -1.58
ATG29	YPL166W	TIM50	Q02776	476 aa		5.21	□□□□□ -1.58
ATG29	YPL166W	MRI1	Q06489	411 aa	Known RBP	5.21	□□□□□ -1.58
ATG29	YPL166W	YCG1	Q06680	1035 aa		5.21	□□□□□ -1.58
ATG29	YPL166W	YEL076C-A	P0CX16	216 aa		5.2	□□□□□ -1.58
ATG29	YPL166W	YLR464W	P0CX17	216 aa		5.2	□□□□□ -1.58
ATG29	YPL166W	HMG2	P12684	1045 aa		5.2	□□□□□ -1.58
ATG29	YPL166W	TFC4	P33339	1025 aa		5.2	□□□□□ -1.58
ATG29	YPL166W	YEL076C	P39971	216 aa		5.2	□□□□□ -1.58
ATG29	YPL166W	THI6	P41835	540 aa		5.2	□□□□□ -1.58
ATG29	YPL166W	PMT6	P42934	759 aa		5.2	□□□□□ -1.58
ATG29	YPL166W	PEX14	P53112	341 aa		5.2	□□□□□ -1.58
ATG29	YPL166W	YGR054W	P53235	642 aa	Known RBP	5.2	□□□□□ -1.58
ATG29	YPL166W	YMC2	P38087	329 aa		5.19	□□□□□ -1.58
ATG29	YPL166W	ENP1	P38333	483 aa	Known RBP	5.19	□□□□□ -1.58
ATG29	YPL166W	MUP3	P38734	546 aa		5.19	□□□□□ -1.58
ATG29	YPL166W	YEL025C	P39991	1188 aa		5.19	□□□□□ -1.58
ATG29	YPL166W	IRC5	P43610	853 aa		5.19	□□□□□ -1.58
ATG29	YPL166W	DAK1	P54838	584 aa	Known RBP	5.19	□□□□□ -1.58
ATG29	YPL166W	NGL2	Q03264	515 aa	Known RBP	5.19	□□□□□ -1.58
ATG29	YPL166W	CEF1	Q03654	590 aa	Predicted RBP	5.19	□□□□□ -1.58
ATG29	YPL166W	PEX15	Q08215	383 aa		5.19	□□□□□ -1.58
ATG29	YPL166W	CWC2	Q12046	339 aa	Predicted RBP	5.19	□□□□□ -1.58
ATG29	YPL166W	ICT1	Q12385	394 aa		5.19	□□□□□ -1.58
ATG29	YPL166W	MDM20	Q12387	796 aa	Known RBP	5.19	□□□□□ -1.58
ATG29	YPL166W	TUF1	P02992	437 aa	Known RBP	5.18	□□□□□ -1.58
ATG29	YPL166W	PLC1	P32383	869 aa		5.18	□□□□□ -1.58
ATG29	YPL166W	RMA1	P36001	430 aa	Known RBP	5.18	□□□□□ -1.58
ATG29	YPL166W	EHT1	P38295	451 aa		5.18	□□□□□ -1.58
ATG29	YPL166W	PAC2	P39937	518 aa		5.18	□□□□□ -1.58
ATG29	YPL166W	PEF1	P53238	335 aa		5.18	□□□□□ -1.58
ATG29	YPL166W	HOL1	P53389	586 aa		5.18	□□□□□ -1.58
ATG29	YPL166W	YDR179W-A	Q03983	463 aa		5.18	□□□□□ -1.58
ATG29	YPL166W	ECM38	Q05902	660 aa	Predicted RBP	5.18	□□□□□ -1.58
ATG29	YPL166W	YAP7	Q08182	245 aa		5.18	□□□□□ -1.58
ATG29	YPL166W	STE12	P13574	688 aa		5.17	□□□□□ -1.58
ATG29	YPL166W	ORC2	P32833	620 aa		5.17	□□□□□ -1.58
ATG29	YPL166W	DHR2	P36009	735 aa	Predicted RBP	5.17	□□□□□ -1.58

Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms