RNA–Protein interactions for RNA: YOR224C

RPB8, Transcript of RNA polymerase subunit ABC14.5, yeast

Gene RPB8, Length 441 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPB8	YOR224C	IES1	P43579	692 aa		4.8	□□□□□ -1.64
RPB8	YOR224C	ENP2	P48234	707 aa	Known RBP	4.8	□□□□□ -1.64
RPB8	YOR224C	SQS1	P53866	767 aa	Known RBP	4.8	□□□□□ -1.64
RPB8	YOR224C	NSE5	Q03718	556 aa		4.8	□□□□□ -1.64
RPB8	YOR224C	UFO1	Q04511	668 aa		4.8	□□□□□ -1.64
RPB8	YOR224C	AIM41	Q12032	185 aa		4.8	□□□□□ -1.64
RPB8	YOR224C	RKI1	Q12189	258 aa		4.8	□□□□□ -1.64
RPB8	YOR224C	AEP2	P22136	580 aa		4.79	□□□□□ -1.64
RPB8	YOR224C	EMP70	P32802	667 aa		4.79	□□□□□ -1.64
RPB8	YOR224C	YEL020C	P39994	560 aa		4.79	□□□□□ -1.64
RPB8	YOR224C	DUG1	P43616	481 aa	Known RBP	4.79	□□□□□ -1.64
RPB8	YOR224C	TIM50	Q02776	476 aa		4.79	□□□□□ -1.64
RPB8	YOR224C	NGL2	Q03264	515 aa	Known RBP	4.79	□□□□□ -1.64
RPB8	YOR224C	SKY1	Q03656	742 aa		4.79	□□□□□ -1.64
RPB8	YOR224C	TRS23	Q03784	219 aa		4.79	□□□□□ -1.64
RPB8	YOR224C	TMA17	Q12513	150 aa		4.79	□□□□□ -1.64
RPB8	YOR224C	APM4	Q99186	491 aa		4.79	□□□□□ -1.64
RPB8	YOR224C	TUB1	P09733	447 aa	Known RBP	4.78	□□□□□ -1.64
RPB8	YOR224C	TUP1	P16649	713 aa		4.78	□□□□□ -1.64
RPB8	YOR224C	CUE2	P36075	443 aa	Known RBP	4.78	□□□□□ -1.64
RPB8	YOR224C	MUP3	P38734	546 aa		4.78	□□□□□ -1.64
RPB8	YOR224C	CRG1	P38892	291 aa	RIP-Chip data	4.78	□□□□□ -1.64	not detected
RPB8	YOR224C	YEL025C	P39991	1188 aa		4.78	□□□□□ -1.64
RPB8	YOR224C	FTR1	P40088	404 aa		4.78	□□□□□ -1.64
RPB8	YOR224C	DAK1	P54838	584 aa	Known RBP	4.78	□□□□□ -1.64
RPB8	YOR224C	MFM1	Q02783	413 aa		4.78	□□□□□ -1.64
RPB8	YOR224C	IZH3	Q07959	543 aa		4.78	□□□□□ -1.64
RPB8	YOR224C	NGL1	Q08213	363 aa	Known RBP	4.78	□□□□□ -1.64
RPB8	YOR224C	BMS1	Q08965	1183 aa	Known RBP	4.78	□□□□□ -1.64
RPB8	YOR224C	BNR1	P40450	1375 aa		4.78	□□□□□ -1.64
RPB8	YOR224C	CDC26	P14724	124 aa		4.77	□□□□□ -1.65
RPB8	YOR224C	ADY2	P25613	283 aa		4.77	□□□□□ -1.65
RPB8	YOR224C	MSS1	P32559	526 aa	Predicted RBP	4.77	□□□□□ -1.65
RPB8	YOR224C	ATF1	P40353	525 aa		4.77	□□□□□ -1.65
RPB8	YOR224C	PRM2	P40534	656 aa		4.77	□□□□□ -1.65
RPB8	YOR224C	FDC1	Q03034	503 aa		4.77	□□□□□ -1.65
RPB8	YOR224C	SLK19	Q08581	821 aa	Known RBP	4.77	□□□□□ -1.65
RPB8	YOR224C	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	4.77	□□□□□ -1.65	not detected
RPB8	YOR224C	SGS1	P35187	1447 aa		4.77	□□□□□ -1.65
RPB8	YOR224C	SER1	P33330	395 aa	Known RBP	4.76	□□□□□ -1.65
RPB8	YOR224C	PMC1	P38929	1173 aa	Predicted RBP	4.76	□□□□□ -1.65
RPB8	YOR224C	GPP2	P40106	250 aa	Known RBP	4.76	□□□□□ -1.65
RPB8	YOR224C	YJR120W	P47157	116 aa		4.76	□□□□□ -1.65
RPB8	YOR224C	SLD3	P53135	668 aa		4.76	□□□□□ -1.65
RPB8	YOR224C	MDR1	P53258	950 aa		4.76	□□□□□ -1.65
RPB8	YOR224C	YML122C	Q03207	126 aa		4.76	□□□□□ -1.65
RPB8	YOR224C	YCG1	Q06680	1035 aa		4.76	□□□□□ -1.65
RPB8	YOR224C	KAR1	P11927	433 aa		4.75	□□□□□ -1.65
RPB8	YOR224C	ACO1	P19414	778 aa	Known RBP RIP-Chip data	4.75	□□□□□ -1.65	not detected
RPB8	YOR224C	ILV6	P25605	309 aa	Known RBP	4.75	□□□□□ -1.65
RPB8	YOR224C	MF(ALPHA)2	P32435	120 aa		4.75	□□□□□ -1.65
RPB8	YOR224C	HXT4	P32467	576 aa		4.75	□□□□□ -1.65
RPB8	YOR224C	YMC2	P38087	329 aa		4.75	□□□□□ -1.65
RPB8	YOR224C	RIM4	P38741	713 aa		4.75	□□□□□ -1.65
RPB8	YOR224C	YGR054W	P53235	642 aa	Known RBP	4.75	□□□□□ -1.65
RPB8	YOR224C	FMP30	Q02883	468 aa		4.75	□□□□□ -1.65
RPB8	YOR224C	CEF1	Q03654	590 aa	Predicted RBP	4.75	□□□□□ -1.65
RPB8	YOR224C	GIS1	Q03833	894 aa		4.75	□□□□□ -1.65
RPB8	YOR224C	YDR179W-A	Q03983	463 aa		4.75	□□□□□ -1.65
RPB8	YOR224C	ARO10	Q06408	635 aa		4.75	□□□□□ -1.65
RPB8	YOR224C	YPL216W	Q08964	1102 aa		4.75	□□□□□ -1.65
RPB8	YOR224C	PHO5	P00635	467 aa		4.74	□□□□□ -1.65
RPB8	YOR224C	COX11	P19516	300 aa	Known RBP	4.74	□□□□□ -1.65
RPB8	YOR224C	ATP12	P22135	325 aa		4.74	□□□□□ -1.65
RPB8	YOR224C	DHR2	P36009	735 aa	Predicted RBP	4.74	□□□□□ -1.65
RPB8	YOR224C	YBR071W	P38243	211 aa		4.74	□□□□□ -1.65
RPB8	YOR224C	EHT1	P38295	451 aa		4.74	□□□□□ -1.65
RPB8	YOR224C	PIH1	P38768	344 aa		4.74	□□□□□ -1.65
RPB8	YOR224C	ASN1	P49089	572 aa	Known RBP	4.74	□□□□□ -1.65
RPB8	YOR224C	ADE5,7	P07244	802 aa	Known RBP	4.73	□□□□□ -1.65
RPB8	YOR224C	YEL076C-A	P0CX16	216 aa		4.73	□□□□□ -1.65
RPB8	YOR224C	YLR464W	P0CX17	216 aa		4.73	□□□□□ -1.65
RPB8	YOR224C	SEC12	P11655	471 aa		4.73	□□□□□ -1.65
RPB8	YOR224C	HMG2	P12684	1045 aa		4.73	□□□□□ -1.65
RPB8	YOR224C	SAT4	P25333	603 aa	Known RBP	4.73	□□□□□ -1.65
RPB8	YOR224C	CDS1	P38221	457 aa		4.73	□□□□□ -1.65
RPB8	YOR224C	SRP68	P38687	599 aa	Known RBP	4.73	□□□□□ -1.65
RPB8	YOR224C	YEL076C	P39971	216 aa		4.73	□□□□□ -1.65
RPB8	YOR224C	ATG36	P46983	293 aa		4.73	□□□□□ -1.65
RPB8	YOR224C	NIT2	P47016	307 aa		4.73	□□□□□ -1.65
RPB8	YOR224C	CWC2	Q12046	339 aa	Predicted RBP	4.73	□□□□□ -1.65
RPB8	YOR224C	UGP1	P32861	499 aa	Known RBP	4.72	□□□□□ -1.65
RPB8	YOR224C	YIP4	P53093	235 aa		4.72	□□□□□ -1.65
RPB8	YOR224C	SNF12	P53628	566 aa		4.72	□□□□□ -1.65
RPB8	YOR224C	FOL1	P53848	824 aa		4.72	□□□□□ -1.65
RPB8	YOR224C	EFR3	Q03653	782 aa	Known RBP	4.72	□□□□□ -1.65
RPB8	YOR224C	HLR1	Q04429	423 aa		4.72	□□□□□ -1.65
RPB8	YOR224C	TPK2	P06245	380 aa		4.71	□□□□□ -1.66
RPB8	YOR224C	PCK1	P10963	549 aa		4.71	□□□□□ -1.66
RPB8	YOR224C	TFC4	P33339	1025 aa		4.71	□□□□□ -1.66
RPB8	YOR224C	FLO10	P36170	1169 aa		4.71	□□□□□ -1.66
RPB8	YOR224C	MRPL7	P36519	292 aa		4.71	□□□□□ -1.66
RPB8	YOR224C	PAC2	P39937	518 aa		4.71	□□□□□ -1.66
RPB8	YOR224C	MIT1	P40002	666 aa		4.71	□□□□□ -1.66
RPB8	YOR224C	EMP65	P40085	556 aa		4.71	□□□□□ -1.66
RPB8	YOR224C	PEX14	P53112	341 aa		4.71	□□□□□ -1.66
RPB8	YOR224C	HOL1	P53389	586 aa		4.71	□□□□□ -1.66
RPB8	YOR224C	ECM38	Q05902	660 aa	Predicted RBP	4.71	□□□□□ -1.66
RPB8	YOR224C	TCB3	Q03640	1545 aa	Known RBP	4.71	□□□□□ -1.66
RPB8	YOR224C	TUF1	P02992	437 aa	Known RBP	4.7	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 15.4 ms