RNA–Protein interactions for RNA: YOL022C

TSR4, Cytoplasmic protein required for correct processing of 20S pre-rRNA, yeast

Gene TSR4, Length 1,227 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TSR4	YOL022C	RKI1	Q12189	258 aa		4.02	□□□□□ -1.77
TSR4	YOL022C	RPS21B	Q3E754	87 aa	Known RBP	4.02	□□□□□ -1.77
TSR4	YOL022C	LAM4	P38800	1345 aa		4.01	□□□□□ -1.77
TSR4	YOL022C	PHO5	P00635	467 aa		4.01	□□□□□ -1.77
TSR4	YOL022C	ABF1	P14164	731 aa		4.01	□□□□□ -1.77
TSR4	YOL022C	KCC4	P25389	1037 aa		4.01	□□□□□ -1.77
TSR4	YOL022C	GPP2	P40106	250 aa	Known RBP	4.01	□□□□□ -1.77
TSR4	YOL022C	BFA1	P47113	574 aa		4.01	□□□□□ -1.77
TSR4	YOL022C	NMA2	P53204	395 aa		4.01	□□□□□ -1.77
TSR4	YOL022C	ECM9	Q02202	377 aa		4.01	□□□□□ -1.77
TSR4	YOL022C	VBA4	Q04602	768 aa	Known RBP	4.01	□□□□□ -1.77
TSR4	YOL022C	RPS17A	P02407	136 aa	Known RBP	4	□□□□□ -1.77
TSR4	YOL022C	RPS17B	P14127	136 aa	Known RBP	4	□□□□□ -1.77
TSR4	YOL022C	DAL3	P32459	195 aa		4	□□□□□ -1.77
TSR4	YOL022C	TFC4	P33339	1025 aa		4	□□□□□ -1.77
TSR4	YOL022C	PMC1	P38929	1173 aa	Predicted RBP	4	□□□□□ -1.77
TSR4	YOL022C	IES1	P43579	692 aa		4	□□□□□ -1.77
TSR4	YOL022C	MNN11	P46985	422 aa	Known RBP	4	□□□□□ -1.77
TSR4	YOL022C	NIT2	P47016	307 aa		4	□□□□□ -1.77
TSR4	YOL022C	YGR153W	P48238	217 aa		4	□□□□□ -1.77
TSR4	YOL022C	NOP15	P53927	220 aa	Predicted RBP	4	□□□□□ -1.77
TSR4	YOL022C	YNL034W	P53963	612 aa		4	□□□□□ -1.77
TSR4	YOL022C	YNL018C	P53976	612 aa		4	□□□□□ -1.77
TSR4	YOL022C	YNL162W-A	Q3E7A8	72 aa		4	□□□□□ -1.77
TSR4	YOL022C	RPS9B	P05755	195 aa	Known RBP	3.99	□□□□□ -1.77
TSR4	YOL022C	AEP2	P22136	580 aa		3.99	□□□□□ -1.77
TSR4	YOL022C	NTH1	P32356	751 aa		3.99	□□□□□ -1.77
TSR4	YOL022C	OAF3	P36023	863 aa		3.99	□□□□□ -1.77
TSR4	YOL022C	SPO1	P53541	631 aa		3.99	□□□□□ -1.77
TSR4	YOL022C	HFI1	Q12060	488 aa		3.99	□□□□□ -1.77
TSR4	YOL022C	APM4	Q99186	491 aa		3.99	□□□□□ -1.77
TSR4	YOL022C	MPD2	Q99316	277 aa		3.99	□□□□□ -1.77
TSR4	YOL022C	ATP4	P05626	244 aa		3.98	□□□□□ -1.77
TSR4	YOL022C	SEC15	P22224	910 aa		3.98	□□□□□ -1.77
TSR4	YOL022C	PRP22	P24384	1145 aa	Known RBP	3.98	□□□□□ -1.77
TSR4	YOL022C	DID4	P36108	232 aa		3.98	□□□□□ -1.77
TSR4	YOL022C	FAT1	P38225	669 aa		3.98	□□□□□ -1.77
TSR4	YOL022C	PEA2	P40091	420 aa		3.98	□□□□□ -1.77
TSR4	YOL022C	SPC98	P53540	846 aa		3.98	□□□□□ -1.77
TSR4	YOL022C	YDR179W-A	Q03983	463 aa		3.98	□□□□□ -1.77
TSR4	YOL022C	UFO1	Q04511	668 aa		3.98	□□□□□ -1.77
TSR4	YOL022C	THI7	Q05998	598 aa		3.98	□□□□□ -1.77
TSR4	YOL022C	RPS21A	P0C0V8	87 aa	Known RBP	3.97	□□□□□ -1.77
TSR4	YOL022C	STE12	P13574	688 aa		3.97	□□□□□ -1.77
TSR4	YOL022C	STE4	P18851	423 aa		3.97	□□□□□ -1.77
TSR4	YOL022C	SEC65	P29478	273 aa		3.97	□□□□□ -1.77
TSR4	YOL022C	PRE4	P30657	266 aa		3.97	□□□□□ -1.77
TSR4	YOL022C	ELF1	P36053	145 aa		3.97	□□□□□ -1.77
TSR4	YOL022C	PXA1	P41909	870 aa		3.97	□□□□□ -1.77
TSR4	YOL022C	PMT6	P42934	759 aa		3.97	□□□□□ -1.77
TSR4	YOL022C	ASN1	P49089	572 aa	Known RBP	3.97	□□□□□ -1.77
TSR4	YOL022C	DIP5	P53388	608 aa		3.97	□□□□□ -1.77
TSR4	YOL022C	MRI1	Q06489	411 aa	Known RBP	3.97	□□□□□ -1.77
TSR4	YOL022C	OSW1	Q08692	278 aa		3.97	□□□□□ -1.77
TSR4	YOL022C	RMP1	Q12530	201 aa		3.97	□□□□□ -1.77
TSR4	YOL022C	SST2	P11972	698 aa	Known RBP	3.96	□□□□□ -1.78
TSR4	YOL022C	CDC26	P14724	124 aa		3.96	□□□□□ -1.78
TSR4	YOL022C	MDM10	P18409	493 aa		3.96	□□□□□ -1.78
TSR4	YOL022C	VPS34	P22543	875 aa		3.96	□□□□□ -1.78
TSR4	YOL022C	HEM12	P32347	362 aa	Predicted RBP	3.96	□□□□□ -1.78
TSR4	YOL022C	MTC7	P32633	139 aa		3.96	□□□□□ -1.78
TSR4	YOL022C	APL3	P38065	1025 aa		3.96	□□□□□ -1.78
TSR4	YOL022C	CDS1	P38221	457 aa		3.96	□□□□□ -1.78
TSR4	YOL022C	FDC1	Q03034	503 aa		3.96	□□□□□ -1.78
TSR4	YOL022C	NSE5	Q03718	556 aa		3.96	□□□□□ -1.78
TSR4	YOL022C	PPN1	Q04119	674 aa		3.96	□□□□□ -1.78
TSR4	YOL022C	HLR1	Q04429	423 aa		3.96	□□□□□ -1.78
TSR4	YOL022C	NYV1	Q12255	253 aa		3.96	□□□□□ -1.78
TSR4	YOL022C	LEU2	P04173	364 aa	Predicted RBP	3.95	□□□□□ -1.78
TSR4	YOL022C	TPK2	P06245	380 aa		3.95	□□□□□ -1.78
TSR4	YOL022C	PIF1	P07271	859 aa		3.95	□□□□□ -1.78
TSR4	YOL022C	GLN4	P13188	809 aa	Known RBP	3.95	□□□□□ -1.78
TSR4	YOL022C	TUP1	P16649	713 aa		3.95	□□□□□ -1.78
TSR4	YOL022C	SAT4	P25333	603 aa	Known RBP	3.95	□□□□□ -1.78
TSR4	YOL022C	YMC1	P32331	307 aa		3.95	□□□□□ -1.78
TSR4	YOL022C	CRG1	P38892	291 aa	RIP-Chip data	3.95	□□□□□ -1.78	not detected
TSR4	YOL022C	TMN3	P40071	706 aa		3.95	□□□□□ -1.78
TSR4	YOL022C	TAF4	P50105	388 aa		3.95	□□□□□ -1.78
TSR4	YOL022C	SKY1	Q03656	742 aa		3.95	□□□□□ -1.78
TSR4	YOL022C	YHM2	Q04013	314 aa		3.95	□□□□□ -1.78
TSR4	YOL022C	KAR1	P11927	433 aa		3.94	□□□□□ -1.78
TSR4	YOL022C	COX11	P19516	300 aa	Known RBP	3.94	□□□□□ -1.78
TSR4	YOL022C	PWP2	P25635	923 aa	Known RBP	3.94	□□□□□ -1.78
TSR4	YOL022C	SER1	P33330	395 aa	Known RBP	3.94	□□□□□ -1.78
TSR4	YOL022C	VPS24	P36095	224 aa	Known RBP	3.94	□□□□□ -1.78
TSR4	YOL022C	DUN1	P39009	513 aa		3.94	□□□□□ -1.78
TSR4	YOL022C	FTR1	P40088	404 aa		3.94	□□□□□ -1.78
TSR4	YOL022C	PRM2	P40534	656 aa		3.94	□□□□□ -1.78
TSR4	YOL022C	VID28	P40547	921 aa		3.94	□□□□□ -1.78
TSR4	YOL022C	SPC105	P53148	917 aa		3.94	□□□□□ -1.78
TSR4	YOL022C	MET14	Q02196	202 aa		3.94	□□□□□ -1.78
TSR4	YOL022C	TIM50	Q02776	476 aa		3.94	□□□□□ -1.78
TSR4	YOL022C	PHM6	Q05637	104 aa		3.94	□□□□□ -1.78
TSR4	YOL022C	GAL1	P04385	528 aa		3.93	□□□□□ -1.78
TSR4	YOL022C	HOM2	P13663	365 aa	Known RBP	3.93	□□□□□ -1.78
TSR4	YOL022C	YEF3	P16521	1044 aa	Known RBP	3.93	□□□□□ -1.78
TSR4	YOL022C	ACO1	P19414	778 aa	Known RBP RIP-Chip data	3.93	□□□□□ -1.78	not detected
TSR4	YOL022C	MF(ALPHA)2	P32435	120 aa		3.93	□□□□□ -1.78
TSR4	YOL022C	UGP1	P32861	499 aa	Known RBP	3.93	□□□□□ -1.78
TSR4	YOL022C	SWE1	P32944	819 aa		3.93	□□□□□ -1.78

Retrieved 100 of 5,963 RNA–protein pairs in 19.7 ms