RNA–Protein interactions for RNA: YNL186W

UBP10, Transcript of Ubiquitin-specific protease, deubiquitinates Ub-protein moieties, yeast

Gene UBP10, Length 2,379 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBP10	YNL186W	BEM4	P39011	633 aa		4.56	□□□□□ -1.68
UBP10	YNL186W	YJL045W	P47052	634 aa		4.56	□□□□□ -1.68
UBP10	YNL186W	BRE5	P53741	515 aa	Known RBP	4.56	□□□□□ -1.68
UBP10	YNL186W	HDA1	P53973	706 aa		4.56	□□□□□ -1.68
UBP10	YNL186W	NAM8	Q00539	523 aa	Known RBP	4.56	□□□□□ -1.68
UBP10	YNL186W	CRR1	Q05790	422 aa		4.56	□□□□□ -1.68
UBP10	YNL186W	PGC1	Q08959	321 aa		4.56	□□□□□ -1.68
UBP10	YNL186W	PSF3	Q12146	194 aa		4.56	□□□□□ -1.68
UBP10	YNL186W	TY1B-A	O13527	1196 aa	Known RBP	4.56	□□□□□ -1.68
UBP10	YNL186W	AAD3	P25612	363 aa		4.56	□□□□□ -1.68
UBP10	YNL186W	MTH1	P35198	433 aa		4.56	□□□□□ -1.68
UBP10	YNL186W	SET3	P36124	751 aa		4.56	□□□□□ -1.68
UBP10	YNL186W	PPE1	P38796	400 aa		4.56	□□□□□ -1.68
UBP10	YNL186W	MAD2	P40958	196 aa		4.56	□□□□□ -1.68
UBP10	YNL186W	CTH1	P47976	325 aa		4.56	□□□□□ -1.68
UBP10	YNL186W	HOS2	P53096	452 aa	Predicted RBP	4.56	□□□□□ -1.68
UBP10	YNL186W	DUS1	P53759	423 aa	Known RBP	4.56	□□□□□ -1.68
UBP10	YNL186W	LEE1	Q02799	301 aa	Known RBP	4.56	□□□□□ -1.68
UBP10	YNL186W	YLR257W	Q06146	321 aa	Known RBP	4.56	□□□□□ -1.68
UBP10	YNL186W	YPL191C	Q08930	360 aa		4.56	□□□□□ -1.68
UBP10	YNL186W	THI21	Q08975	551 aa		4.56	□□□□□ -1.68
UBP10	YNL186W	FUM1	P08417	488 aa	Known RBP	4.55	□□□□□ -1.68
UBP10	YNL186W	ERG3	P32353	365 aa		4.55	□□□□□ -1.68
UBP10	YNL186W	MF(ALPHA)2	P32435	120 aa		4.55	□□□□□ -1.68
UBP10	YNL186W	SDS22	P36047	338 aa		4.55	□□□□□ -1.68
UBP10	YNL186W	BTN2	P53286	410 aa		4.55	□□□□□ -1.68
UBP10	YNL186W	YPL071C	Q02864	156 aa		4.55	□□□□□ -1.68
UBP10	YNL186W	TY1A-DR2	Q03964	440 aa	Known RBP	4.55	□□□□□ -1.68
UBP10	YNL186W	SMC6	Q12749	1114 aa		4.55	□□□□□ -1.68
UBP10	YNL186W	OLE1	P21147	510 aa	Known RBP	4.55	□□□□□ -1.68
UBP10	YNL186W	ESL2	P36168	1195 aa		4.55	□□□□□ -1.68
UBP10	YNL186W	CCT3	P39077	534 aa	Known RBP	4.55	□□□□□ -1.68
UBP10	YNL186W	HST3	P53687	447 aa		4.55	□□□□□ -1.68
UBP10	YNL186W	MFB1	Q04922	465 aa		4.55	□□□□□ -1.68
UBP10	YNL186W	YLR407W	Q06070	228 aa		4.55	□□□□□ -1.68
UBP10	YNL186W	RCL1	Q08096	367 aa	Predicted RBP	4.55	□□□□□ -1.68
UBP10	YNL186W	DIN7	Q12086	430 aa		4.55	□□□□□ -1.68
UBP10	YNL186W	NSI1	Q12457	570 aa		4.55	□□□□□ -1.68
UBP10	YNL186W	IKI3	Q06706	1349 aa	Known RBP	4.55	□□□□□ -1.68
UBP10	YNL186W	PHO5	P00635	467 aa		4.54	□□□□□ -1.68
UBP10	YNL186W	VAS1	P07806	1104 aa	Known RBP	4.54	□□□□□ -1.68
UBP10	YNL186W	YEL076C-A	P0CX16	216 aa		4.54	□□□□□ -1.68
UBP10	YNL186W	YLR464W	P0CX17	216 aa		4.54	□□□□□ -1.68
UBP10	YNL186W	CBP3	P21560	335 aa		4.54	□□□□□ -1.68
UBP10	YNL186W	AMS1	P22855	1083 aa		4.54	□□□□□ -1.68
UBP10	YNL186W	SAS3	P34218	831 aa		4.54	□□□□□ -1.68
UBP10	YNL186W	BYE1	P36106	594 aa		4.54	□□□□□ -1.68
UBP10	YNL186W	SRP72	P38688	640 aa	Known RBP	4.54	□□□□□ -1.68
UBP10	YNL186W	SET5	P38890	526 aa	Known RBP	4.54	□□□□□ -1.68
UBP10	YNL186W	YEL076C	P39971	216 aa		4.54	□□□□□ -1.68
UBP10	YNL186W	GIP2	P40036	548 aa		4.54	□□□□□ -1.68
UBP10	YNL186W	SET2	P46995	733 aa	Known RBP	4.54	□□□□□ -1.68
UBP10	YNL186W	SNO4	Q04902	237 aa		4.54	□□□□□ -1.68
UBP10	YNL186W	HSP33	Q08914	237 aa	Known RBP	4.54	□□□□□ -1.68
UBP10	YNL186W	HSP32	Q08992	237 aa		4.54	□□□□□ -1.68
UBP10	YNL186W	HAL9	Q12180	1030 aa		4.54	□□□□□ -1.68
UBP10	YNL186W	FLR1	P38124	548 aa		4.54	□□□□□ -1.68
UBP10	YNL186W	LYS14	P40971	790 aa		4.54	□□□□□ -1.68
UBP10	YNL186W	SHR5	P41912	237 aa		4.54	□□□□□ -1.68
UBP10	YNL186W	YFL052W	P43551	465 aa		4.54	□□□□□ -1.68
UBP10	YNL186W	ATP22	P50273	684 aa	Predicted RBP	4.54	□□□□□ -1.68
UBP10	YNL186W	YDR131C	Q03899	556 aa		4.54	□□□□□ -1.68
UBP10	YNL186W	CSR1	Q06705	408 aa	Known RBP	4.54	□□□□□ -1.68
UBP10	YNL186W	RED1	P14291	827 aa		4.53	□□□□□ -1.68
UBP10	YNL186W	PDX1	P16451	410 aa		4.53	□□□□□ -1.68
UBP10	YNL186W	ACO1	P19414	778 aa	Known RBP RIP-Chip data	4.53	□□□□□ -1.68	not detected
UBP10	YNL186W	CLB4	P24871	460 aa		4.53	□□□□□ -1.68
UBP10	YNL186W	SGF29	P25554	259 aa		4.53	□□□□□ -1.68
UBP10	YNL186W	RPT3	P33298	428 aa	Known RBP	4.53	□□□□□ -1.68
UBP10	YNL186W	PSF2	P40359	213 aa		4.53	□□□□□ -1.68
UBP10	YNL186W	BRE2	P43132	505 aa		4.53	□□□□□ -1.68
UBP10	YNL186W	ELG1	Q12050	791 aa		4.53	□□□□□ -1.68
UBP10	YNL186W	YOR022C	Q12204	715 aa		4.53	□□□□□ -1.68
UBP10	YNL186W	POL3	P15436	1097 aa		4.53	□□□□□ -1.68
UBP10	YNL186W	CKA1	P15790	372 aa		4.53	□□□□□ -1.68
UBP10	YNL186W	SIR1	P21691	654 aa		4.53	□□□□□ -1.68
UBP10	YNL186W	YSC84	P32793	468 aa		4.53	□□□□□ -1.68
UBP10	YNL186W	ORC2	P32833	620 aa		4.53	□□□□□ -1.68
UBP10	YNL186W	AKL1	P38080	1108 aa	Known RBP	4.53	□□□□□ -1.68
UBP10	YNL186W	LTP1	P40347	161 aa		4.53	□□□□□ -1.68
UBP10	YNL186W	JEM1	P40358	645 aa		4.53	□□□□□ -1.68
UBP10	YNL186W	CEP3	P40969	608 aa		4.53	□□□□□ -1.68
UBP10	YNL186W	ROG3	P43602	733 aa		4.53	□□□□□ -1.68
UBP10	YNL186W	MNT2	P53059	558 aa		4.53	□□□□□ -1.68
UBP10	YNL186W	PRP3	Q03338	469 aa	Predicted RBP	4.53	□□□□□ -1.68
UBP10	YNL186W	YMR155W	Q03795	547 aa		4.53	□□□□□ -1.68
UBP10	YNL186W	YPS7	Q06325	596 aa		4.53	□□□□□ -1.68
UBP10	YNL186W	DIB1	Q06819	143 aa	Predicted RBP	4.53	□□□□□ -1.68
UBP10	YNL186W	IWR1	Q07532	353 aa	Predicted RBP	4.53	□□□□□ -1.68
UBP10	YNL186W	DBP10	Q12389	995 aa	Known RBP	4.53	□□□□□ -1.68
UBP10	YNL186W	RIM15	P43565	1770 aa		4.52	□□□□□ -1.69
UBP10	YNL186W	ACE2	P21192	770 aa		4.52	□□□□□ -1.69
UBP10	YNL186W	DIT1	P21623	536 aa		4.52	□□□□□ -1.69
UBP10	YNL186W	RFA1	P22336	621 aa	Known RBP	4.52	□□□□□ -1.69
UBP10	YNL186W	SWI4	P25302	1093 aa	Known RBP	4.52	□□□□□ -1.69
UBP10	YNL186W	MDL2	P33311	773 aa		4.52	□□□□□ -1.69
UBP10	YNL186W	TED1	P40533	473 aa		4.52	□□□□□ -1.69
UBP10	YNL186W	SAP4	P53036	818 aa		4.52	□□□□□ -1.69
UBP10	YNL186W	YNR071C	P53757	342 aa		4.52	□□□□□ -1.69
UBP10	YNL186W	TIM50	Q02776	476 aa		4.52	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms