RNA–Protein interactions for RNA: YMR240C

CUS1, Transcript of Protein required for assembly of U2 snRNP into the spliceosome, yeastyeast

Gene CUS1, Length 1,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUS1YMR240C PIG2P40187 538 aa5.4□□□□□ -1.55
CUS1YMR240C TRI1Q05024 226 aa5.4□□□□□ -1.55
CUS1YMR240C ADY4Q05955 493 aa5.4□□□□□ -1.55
CUS1YMR240C AIM39Q08223 395 aa5.4□□□□□ -1.55
CUS1YMR240C FRE5Q08908 694 aa5.4□□□□□ -1.55
CUS1YMR240C NTO1Q12311 748 aa5.4□□□□□ -1.55
CUS1YMR240C TRM13Q12383 476 aa5.4□□□□□ -1.55
CUS1YMR240C TUF1P02992 437 aaKnown RBP5.39□□□□□ -1.55
CUS1YMR240C FEN2P25621 512 aaKnown RBP5.39□□□□□ -1.55
CUS1YMR240C HRR25P29295 494 aaKnown RBP5.39□□□□□ -1.55
CUS1YMR240C COS111P38308 924 aa5.39□□□□□ -1.55
CUS1YMR240C CRG1P38892 291 aaRIP-Chip data5.39□□□□□ -1.55not detected
CUS1YMR240C REV7P38927 245 aa5.39□□□□□ -1.55
CUS1YMR240C SWD1P39706 426 aa5.39□□□□□ -1.55
CUS1YMR240C YIL077CP40508 320 aa5.39□□□□□ -1.55
CUS1YMR240C YJL163CP46996 555 aa5.39□□□□□ -1.55
CUS1YMR240C YNR071CP53757 342 aa5.39□□□□□ -1.55
CUS1YMR240C RNT1Q02555 471 aa5.39□□□□□ -1.55
CUS1YMR240C FDC1Q03034 503 aa5.39□□□□□ -1.55
CUS1YMR240C RGC1Q06108 1083 aaKnown RBP5.39□□□□□ -1.55
CUS1YMR240C YFT2Q06676 274 aa5.39□□□□□ -1.55
CUS1YMR240C IRC13Q08630 104 aa5.39□□□□□ -1.55
CUS1YMR240C DBP10Q12389 995 aaKnown RBP5.39□□□□□ -1.55
CUS1YMR240C SIR3P06701 978 aa5.38□□□□□ -1.55
CUS1YMR240C ADH4P10127 382 aa5.38□□□□□ -1.55
CUS1YMR240C APA1P16550 321 aaKnown RBP5.38□□□□□ -1.55
CUS1YMR240C CBP3P21560 335 aa5.38□□□□□ -1.55
CUS1YMR240C MSH1P25846 959 aa5.38□□□□□ -1.55
CUS1YMR240C SHM2P37291 469 aaKnown RBP5.38□□□□□ -1.55
CUS1YMR240C YLF2P38746 405 aa5.38□□□□□ -1.55
CUS1YMR240C FMP52P40008 231 aa5.38□□□□□ -1.55
CUS1YMR240C VPS27P40343 622 aaKnown RBP5.38□□□□□ -1.55
CUS1YMR240C TAH11P47112 604 aa5.38□□□□□ -1.55
CUS1YMR240C YDL183CP48569 320 aa5.38□□□□□ -1.55
CUS1YMR240C ECM16Q04217 1267 aaKnown RBP5.38□□□□□ -1.55
CUS1YMR240C AIM41Q12032 185 aa5.38□□□□□ -1.55
CUS1YMR240C CHS5Q12114 671 aaKnown RBP5.38□□□□□ -1.55
CUS1YMR240C ZRT2Q12436 422 aa5.38□□□□□ -1.55
CUS1YMR240C ALG7P07286 448 aa5.37□□□□□ -1.55
CUS1YMR240C DBF20P32328 564 aa5.37□□□□□ -1.55
CUS1YMR240C SWE1P32944 819 aa5.37□□□□□ -1.55
CUS1YMR240C HIS7P33734 552 aaKnown RBP5.37□□□□□ -1.55
CUS1YMR240C FTR1P40088 404 aa5.37□□□□□ -1.55
CUS1YMR240C IMA5P40884 581 aa5.37□□□□□ -1.55
CUS1YMR240C MAD3P47074 515 aa5.37□□□□□ -1.55
CUS1YMR240C HIM1Q06674 414 aa5.37□□□□□ -1.55
CUS1YMR240C YCG1Q06680 1035 aa5.37□□□□□ -1.55
CUS1YMR240C HOS1Q12214 470 aa5.37□□□□□ -1.55
CUS1YMR240C YKL033W-AQ86ZR7 236 aa5.37□□□□□ -1.55
CUS1YMR240C URA3P03962 267 aa5.36□□□□□ -1.55
CUS1YMR240C MSM1P22438 575 aa5.36□□□□□ -1.55
CUS1YMR240C YKL222CP35995 705 aa5.36□□□□□ -1.55
CUS1YMR240C HRB1P38922 454 aaKnown RBP RIP-Chip data5.36□□□□□ -1.55not detected
CUS1YMR240C RPT2P40327 437 aaKnown RBP5.36□□□□□ -1.55
CUS1YMR240C SAP185P40856 1058 aa5.36□□□□□ -1.55
CUS1YMR240C RFX1P48743 811 aa5.36□□□□□ -1.55
CUS1YMR240C PAN2P53010 1115 aaPredicted RBP5.36□□□□□ -1.55
CUS1YMR240C MOT3P54785 490 aaKnown RBP5.36□□□□□ -1.55
CUS1YMR240C URN1Q06525 465 aaKnown RBP5.36□□□□□ -1.55
CUS1YMR240C PPR1P07272 904 aaPredicted RBP5.35□□□□□ -1.55
CUS1YMR240C TUP1P16649 713 aa5.35□□□□□ -1.55
CUS1YMR240C SEC18P18759 758 aaKnown RBP5.35□□□□□ -1.55
CUS1YMR240C PMI40P29952 429 aaKnown RBP5.35□□□□□ -1.55
CUS1YMR240C SFB3P38810 929 aa5.35□□□□□ -1.55
CUS1YMR240C UBA2P52488 636 aa5.35□□□□□ -1.55
CUS1YMR240C MDR1P53258 950 aa5.35□□□□□ -1.55
CUS1YMR240C YAP1802P53309 568 aa5.35□□□□□ -1.55
CUS1YMR240C NRD1P53617 575 aaKnown RBP RIP-Chip data5.35□□□□□ -1.55not detected
CUS1YMR240C EIS1Q05050 843 aaKnown RBP5.35□□□□□ -1.55
CUS1YMR240C YLR040CQ07988 224 aa5.35□□□□□ -1.55
CUS1YMR240C BUD21Q08492 214 aaPredicted RBP5.35□□□□□ -1.55
CUS1YMR240C ARG1P22768 420 aa5.34□□□□□ -1.55
CUS1YMR240C YCR015CP25616 317 aa5.34□□□□□ -1.55
CUS1YMR240C NTH1P32356 751 aa5.34□□□□□ -1.55
CUS1YMR240C MSS1P32559 526 aaPredicted RBP5.34□□□□□ -1.55
CUS1YMR240C APM3P38153 483 aa5.34□□□□□ -1.55
CUS1YMR240C TEL2P53038 688 aa5.34□□□□□ -1.55
CUS1YMR240C FHN1P53279 174 aa5.34□□□□□ -1.55
CUS1YMR240C PHO11P35842 467 aa5.33□□□□□ -1.56
CUS1YMR240C SUL1P38359 859 aa5.33□□□□□ -1.56
CUS1YMR240C PHO12P38693 467 aa5.33□□□□□ -1.56
CUS1YMR240C SPC72P39723 622 aa5.33□□□□□ -1.56
CUS1YMR240C TMN3P40071 706 aa5.33□□□□□ -1.56
CUS1YMR240C MPS3P47069 682 aa5.33□□□□□ -1.56
CUS1YMR240C CIA1Q05583 330 aa5.33□□□□□ -1.56
CUS1YMR240C CRD1Q07560 283 aa5.33□□□□□ -1.56
CUS1YMR240C AAD4Q07747 329 aa5.33□□□□□ -1.56
CUS1YMR240C ESC8Q08119 714 aa5.33□□□□□ -1.56
CUS1YMR240C MCH5Q08777 521 aa5.33□□□□□ -1.56
CUS1YMR240C TRM2P33753 639 aa5.32□□□□□ -1.56
CUS1YMR240C CTP1P38152 299 aa5.32□□□□□ -1.56
CUS1YMR240C EXO84P38261 753 aa5.32□□□□□ -1.56
CUS1YMR240C EHT1P38295 451 aa5.32□□□□□ -1.56
CUS1YMR240C STT3P39007 718 aaKnown RBP5.32□□□□□ -1.56
CUS1YMR240C KHA1P40309 873 aa5.32□□□□□ -1.56
CUS1YMR240C GSM1P42950 618 aa5.32□□□□□ -1.56
CUS1YMR240C CPR6P53691 371 aaKnown RBP5.32□□□□□ -1.56
CUS1YMR240C RIA1P53893 1110 aa5.32□□□□□ -1.56
CUS1YMR240C YOL073CQ08232 322 aa5.32□□□□□ -1.56
CUS1YMR240C MLH3Q12083 715 aa5.32□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 51.6 ms