RNA–Protein interactions for RNA: YMR050C

YMR050C, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YMR050C, Length 5,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YMR050CYMR050C ELO1P39540 310 aa2.74□□□□□ -1.97
YMR050CYMR050C KAP114P53067 1004 aa2.74□□□□□ -1.97
YMR050CYMR050C CSL4P53859 292 aaPredicted RBP2.74□□□□□ -1.97
YMR050CYMR050C ACS1Q01574 713 aa2.74□□□□□ -1.97
YMR050CYMR050C NOC4Q06512 552 aaPredicted RBP2.74□□□□□ -1.97
YMR050CYMR050C RGS2Q99188 309 aa2.74□□□□□ -1.97
YMR050CYMR050C MPD2Q99316 277 aa2.74□□□□□ -1.97
YMR050CYMR050C PFK1P16861 987 aaKnown RBP2.73□□□□□ -1.97
YMR050CYMR050C RPS7AP26786 190 aaKnown RBP2.73□□□□□ -1.97
YMR050CYMR050C NPL6P32832 435 aa2.73□□□□□ -1.97
YMR050CYMR050C OTU2P38747 307 aaKnown RBP2.73□□□□□ -1.97
YMR050CYMR050C APE4P38821 490 aa2.73□□□□□ -1.97
YMR050CYMR050C IRR1P40541 1150 aa2.73□□□□□ -1.97
YMR050CYMR050C BUD8P41698 603 aa2.73□□□□□ -1.97
YMR050CYMR050C NIS1P53939 407 aa2.73□□□□□ -1.97
YMR050CYMR050C VPS16Q03308 798 aa2.73□□□□□ -1.97
YMR050CYMR050C LCB5Q06147 687 aaKnown RBP2.73□□□□□ -1.97
YMR050CYMR050C NDL1Q06568 189 aa2.73□□□□□ -1.97
YMR050CYMR050C TSR2Q06672 205 aaKnown RBP2.73□□□□□ -1.97
YMR050CYMR050C RTT109Q07794 436 aa2.73□□□□□ -1.97
YMR050CYMR050C NSL1Q12143 216 aa2.73□□□□□ -1.97
YMR050CYMR050C ATG34Q12292 412 aa2.73□□□□□ -1.97
YMR050CYMR050C MHF1Q3E835 90 aa2.73□□□□□ -1.97
YMR050CYMR050C NEM1P38757 446 aa2.73□□□□□ -1.97
YMR050CYMR050C YHI9P38765 294 aa2.73□□□□□ -1.97
YMR050CYMR050C MET18P40469 1032 aa2.73□□□□□ -1.97
YMR050CYMR050C FAF1P40546 346 aaPredicted RBP2.73□□□□□ -1.97
YMR050CYMR050C PAC11P40960 533 aa2.73□□□□□ -1.97
YMR050CYMR050C BIR1P47134 954 aa2.73□□□□□ -1.97
YMR050CYMR050C RAD17P48581 401 aa2.73□□□□□ -1.97
YMR050CYMR050C AZR1P50080 613 aa2.73□□□□□ -1.97
YMR050CYMR050C NOP19P53317 196 aaPredicted RBP2.73□□□□□ -1.97
YMR050CYMR050C TIM10P87108 93 aa2.73□□□□□ -1.97
YMR050CYMR050C RPS15Q01855 142 aaKnown RBP2.73□□□□□ -1.97
YMR050CYMR050C DOT1Q04089 582 aaKnown RBP2.73□□□□□ -1.97
YMR050CYMR050C SXM1Q04175 944 aaKnown RBP2.73□□□□□ -1.97
YMR050CYMR050C YPR114WQ06107 315 aa2.73□□□□□ -1.97
YMR050CYMR050C CLP1Q08685 445 aaPredicted RBP2.73□□□□□ -1.97
YMR050CYMR050C TMA16Q08687 178 aa2.73□□□□□ -1.97
YMR050CYMR050C CAF20P12962 161 aaKnown RBP2.73□□□□□ -1.97
YMR050CYMR050C RRT12P25381 491 aa2.73□□□□□ -1.97
YMR050CYMR050C SPB1P25582 841 aaPredicted RBP2.73□□□□□ -1.97
YMR050CYMR050C SPB4P25808 606 aaPredicted RBP2.73□□□□□ -1.97
YMR050CYMR050C YME2P32843 850 aa2.73□□□□□ -1.97
YMR050CYMR050C RPS0AP32905 252 aaKnown RBP2.73□□□□□ -1.97
YMR050CYMR050C GND1P38720 489 aaKnown RBP2.73□□□□□ -1.97
YMR050CYMR050C RAD55P38953 406 aa2.73□□□□□ -1.97
YMR050CYMR050C CEP3P40969 608 aa2.73□□□□□ -1.97
YMR050CYMR050C ALT1P52893 592 aa2.73□□□□□ -1.97
YMR050CYMR050C SFB2P53953 876 aa2.73□□□□□ -1.97
YMR050CYMR050C RRB1Q04225 511 aaKnown RBP2.73□□□□□ -1.97
YMR050CYMR050C RRG8Q06109 277 aa2.73□□□□□ -1.97
YMR050CYMR050C AIM6Q07716 390 aa2.73□□□□□ -1.97
YMR050CYMR050C MLH3Q12083 715 aa2.73□□□□□ -1.97
YMR050CYMR050C PKH2Q12236 1081 aaKnown RBP2.73□□□□□ -1.97
YMR050CYMR050C COQ4O13525 335 aa2.73□□□□□ -1.97
YMR050CYMR050C HXK2P04807 486 aaKnown RBP2.73□□□□□ -1.97
YMR050CYMR050C KRE2P27809 442 aa2.73□□□□□ -1.97
YMR050CYMR050C SWI3P32591 825 aa2.73□□□□□ -1.97
YMR050CYMR050C SOF1P33750 489 aaKnown RBP2.73□□□□□ -1.97
YMR050CYMR050C SEF1P34228 1148 aa2.73□□□□□ -1.97
YMR050CYMR050C GLG1P36143 616 aa2.73□□□□□ -1.97
YMR050CYMR050C VID24P38263 362 aa2.73□□□□□ -1.97
YMR050CYMR050C NPT1P39683 429 aaKnown RBP2.73□□□□□ -1.97
YMR050CYMR050C IDS2P46958 469 aa2.73□□□□□ -1.97
YMR050CYMR050C NMD5P46970 1048 aa2.73□□□□□ -1.97
YMR050CYMR050C PRP31P49704 494 aaPredicted RBP2.73□□□□□ -1.97
YMR050CYMR050C TEL2P53038 688 aa2.73□□□□□ -1.97
YMR050CYMR050C RMD9P53140 646 aaKnown RBP2.73□□□□□ -1.97
YMR050CYMR050C DRN1P53255 507 aaKnown RBP2.73□□□□□ -1.97
YMR050CYMR050C YSA1Q01976 231 aa2.73□□□□□ -1.97
YMR050CYMR050C SKO1Q02100 647 aa2.73□□□□□ -1.97
YMR050CYMR050C NOG1Q02892 647 aaKnown RBP2.73□□□□□ -1.97
YMR050CYMR050C USA1Q03714 838 aa2.73□□□□□ -1.97
YMR050CYMR050C GYL1Q04322 720 aa2.73□□□□□ -1.97
YMR050CYMR050C EAF1Q06337 982 aa2.73□□□□□ -1.97
YMR050CYMR050C PUF3Q07807 879 aaKnown RBP RIP-Chip data2.73□□□□□ -1.97not detected
YMR050CYMR050C ALR1Q08269 859 aa2.73□□□□□ -1.97
YMR050CYMR050C SAC3P46674 1301 aa2.73□□□□□ -1.97
YMR050CYMR050C AI2P03876 854 aa2.72□□□□□ -1.97
YMR050CYMR050C CSE2P33308 149 aa2.72□□□□□ -1.97
YMR050CYMR050C CRP1P38845 465 aaKnown RBP2.72□□□□□ -1.97
YMR050CYMR050C YRB1P41920 201 aaKnown RBP2.72□□□□□ -1.97
YMR050CYMR050C CDC55Q00362 526 aa2.72□□□□□ -1.97
YMR050CYMR050C YPL109CQ02981 657 aa2.72□□□□□ -1.97
YMR050CYMR050C DIC1Q06143 298 aa2.72□□□□□ -1.97
YMR050CYMR050C SPH1Q06160 661 aa2.72□□□□□ -1.97
YMR050CYMR050C YPR204WQ08995 1032 aa2.72□□□□□ -1.97
YMR050CYMR050C LSP1Q12230 341 aaKnown RBP2.72□□□□□ -1.97
YMR050CYMR050C TEF1P02994 458 aaKnown RBP2.72□□□□□ -1.97
YMR050CYMR050C CLN3P13365 580 aa2.72□□□□□ -1.97
YMR050CYMR050C CKA2P19454 339 aa2.72□□□□□ -1.97
YMR050CYMR050C SUI2P20459 304 aaKnown RBP2.72□□□□□ -1.97
YMR050CYMR050C TPS2P31688 896 aaKnown RBP2.72□□□□□ -1.97
YMR050CYMR050C HEM12P32347 362 aaPredicted RBP2.72□□□□□ -1.97
YMR050CYMR050C DCG1P32460 244 aa2.72□□□□□ -1.97
YMR050CYMR050C MGS1P40151 587 aa2.72□□□□□ -1.97
YMR050CYMR050C TFG1P41895 735 aaPredicted RBP2.72□□□□□ -1.97
YMR050CYMR050C SNZ3P43545 298 aa2.72□□□□□ -1.97
YMR050CYMR050C ERP6P53198 216 aa2.72□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 31.1 ms