RNA–Protein interactions for RNA: YLR421C

RPN13, Transcript of Subunit of the 19S regulatory particle of the 26S proteasome lid, yeastyeast

Gene RPN13, Length 471 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN13YLR421C MBR1P23493 339 aa4.06□□□□□ -1.76
RPN13YLR421C YPT7P32939 208 aa4.06□□□□□ -1.76
RPN13YLR421C HOT13P36078 116 aa4.06□□□□□ -1.76
RPN13YLR421C PAF1P38351 445 aa4.06□□□□□ -1.76
RPN13YLR421C SCS3P53012 380 aa4.06□□□□□ -1.76
RPN13YLR421C SUB1P54000 292 aaKnown RBP4.06□□□□□ -1.76
RPN13YLR421C UGO1Q03327 502 aa4.06□□□□□ -1.76
RPN13YLR421C COG8Q04632 607 aa4.06□□□□□ -1.76
RPN13YLR421C IKI3Q06706 1349 aaKnown RBP4.05□□□□□ -1.76
RPN13YLR421C KIN82P25341 720 aa4.05□□□□□ -1.76
RPN13YLR421C CCT5P40413 562 aaKnown RBP4.05□□□□□ -1.76
RPN13YLR421C TPM2P40414 161 aa4.05□□□□□ -1.76
RPN13YLR421C MPS1P54199 764 aa4.05□□□□□ -1.76
RPN13YLR421C ARG7Q04728 441 aa4.05□□□□□ -1.76
RPN13YLR421C IZH3Q07959 543 aa4.05□□□□□ -1.76
RPN13YLR421C AI5_ALPHAQ9ZZX1 630 aa4.05□□□□□ -1.76
RPN13YLR421C NUP170P38181 1502 aa4.05□□□□□ -1.76
RPN13YLR421C AAD3P25612 363 aa4.04□□□□□ -1.76
RPN13YLR421C IMG2P25642 146 aaPredicted RBP4.04□□□□□ -1.76
RPN13YLR421C PET127P32606 800 aa4.04□□□□□ -1.76
RPN13YLR421C TRS23Q03784 219 aa4.04□□□□□ -1.76
RPN13YLR421C NOP14Q99207 810 aaKnown RBP4.04□□□□□ -1.76
RPN13YLR421C MYO2P19524 1574 aaKnown RBP4.04□□□□□ -1.76
RPN13YLR421C SIN3P22579 1536 aa4.04□□□□□ -1.76
RPN13YLR421C STU1P38198 1513 aa4.04□□□□□ -1.76
RPN13YLR421C SPT6P23615 1451 aaKnown RBP4.04□□□□□ -1.76
RPN13YLR421C ECM5Q03214 1411 aa4.04□□□□□ -1.76
RPN13YLR421C THO2P53552 1597 aaKnown RBP4.03□□□□□ -1.76
RPN13YLR421C MRC1P25588 1096 aa4.03□□□□□ -1.76
RPN13YLR421C YEL1P34225 687 aa4.03□□□□□ -1.76
RPN13YLR421C YKR075CP36155 307 aa4.03□□□□□ -1.76
RPN13YLR421C PIP2P52960 996 aa4.03□□□□□ -1.76
RPN13YLR421C RCR2Q03446 210 aaKnown RBP4.03□□□□□ -1.76
RPN13YLR421C VBA4Q04602 768 aaKnown RBP4.03□□□□□ -1.76
RPN13YLR421C REV3P14284 1504 aa4.03□□□□□ -1.76
RPN13YLR421C SSK2P53599 1579 aa4.02□□□□□ -1.77
RPN13YLR421C STE4P18851 423 aa4.02□□□□□ -1.77
RPN13YLR421C BEM4P39011 633 aa4.02□□□□□ -1.77
RPN13YLR421C YGL117WP53133 265 aa4.02□□□□□ -1.77
RPN13YLR421C DNM1P54861 757 aa4.02□□□□□ -1.77
RPN13YLR421C STP1Q00947 519 aa4.02□□□□□ -1.77
RPN13YLR421C VPS72Q03388 795 aa4.02□□□□□ -1.77
RPN13YLR421C NTG2Q08214 380 aa4.02□□□□□ -1.77
RPN13YLR421C YOL057WQ08225 711 aa4.02□□□□□ -1.77
RPN13YLR421C HIR3P47171 1648 aa4.02□□□□□ -1.77
RPN13YLR421C SSD1P24276 1250 aaKnown RBP RIP-Chip data4.01□□□□□ -1.77not detected
RPN13YLR421C YKU70P32807 602 aa4.01□□□□□ -1.77
RPN13YLR421C ULP2P40537 1034 aaPredicted RBP4.01□□□□□ -1.77
RPN13YLR421C CPR8P53728 308 aa4.01□□□□□ -1.77
RPN13YLR421C YNR029CP53729 429 aaKnown RBP4.01□□□□□ -1.77
RPN13YLR421C SPT7P35177 1332 aa4□□□□□ -1.77
RPN13YLR421C MAL31P38156 614 aa4□□□□□ -1.77
RPN13YLR421C RIM4P38741 713 aa4□□□□□ -1.77
RPN13YLR421C NAB3P38996 802 aaKnown RBP RIP-Chip data4□□□□□ -1.77not detected
RPN13YLR421C YEN1P40028 759 aa4□□□□□ -1.77
RPN13YLR421C BPL1P48445 690 aaPredicted RBP4□□□□□ -1.77
RPN13YLR421C MET13P53128 600 aa4□□□□□ -1.77
RPN13YLR421C DAK1P54838 584 aaKnown RBP4□□□□□ -1.77
RPN13YLR421C YMR210WQ03649 449 aa4□□□□□ -1.77
RPN13YLR421C YLR407WQ06070 228 aa4□□□□□ -1.77
RPN13YLR421C POL1P13382 1468 aa3.99□□□□□ -1.77
RPN13YLR421C SEC3P33332 1336 aaKnown RBP3.99□□□□□ -1.77
RPN13YLR421C SSM4P40318 1319 aa3.99□□□□□ -1.77
RPN13YLR421C BPT1P14772 1559 aa3.99□□□□□ -1.77
RPN13YLR421C LEU2P04173 364 aaPredicted RBP3.99□□□□□ -1.77
RPN13YLR421C RPL8AP17076 256 aaKnown RBP3.99□□□□□ -1.77
RPN13YLR421C TMN3P40071 706 aa3.99□□□□□ -1.77
RPN13YLR421C YPS7Q06325 596 aa3.99□□□□□ -1.77
RPN13YLR421C GUD1Q07729 489 aa3.99□□□□□ -1.77
RPN13YLR421C CIR2Q08822 631 aa3.99□□□□□ -1.77
RPN13YLR421C SCC2Q04002 1493 aa3.98□□□□□ -1.77
RPN13YLR421C PEP1P32319 1579 aa3.98□□□□□ -1.77
RPN13YLR421C IME1P21190 360 aa3.98□□□□□ -1.77
RPN13YLR421C PRS1P32895 427 aaKnown RBP3.98□□□□□ -1.77
RPN13YLR421C PSA1P41940 361 aaKnown RBP3.98□□□□□ -1.77
RPN13YLR421C ORM2Q06144 216 aa3.98□□□□□ -1.77
RPN13YLR421C YLR001CQ07895 862 aa3.98□□□□□ -1.77
RPN13YLR421C BUD21Q08492 214 aaPredicted RBP3.98□□□□□ -1.77
RPN13YLR421C GEP3Q08622 556 aa3.98□□□□□ -1.77
RPN13YLR421C FRE7Q12333 620 aa3.98□□□□□ -1.77
RPN13YLR421C PDR10P51533 1564 aa3.97□□□□□ -1.77
RPN13YLR421C PRP22P24384 1145 aaKnown RBP3.97□□□□□ -1.77
RPN13YLR421C BUD8P41698 603 aa3.97□□□□□ -1.77
RPN13YLR421C PXA1P41909 870 aa3.97□□□□□ -1.77
RPN13YLR421C BFA1P47113 574 aa3.97□□□□□ -1.77
RPN13YLR421C PEX8P53248 589 aa3.97□□□□□ -1.77
RPN13YLR421C TAF2P23255 1407 aa3.96□□□□□ -1.77
RPN13YLR421C PWP2P25635 923 aaKnown RBP3.96□□□□□ -1.78
RPN13YLR421C YUR1P26725 428 aa3.96□□□□□ -1.78
RPN13YLR421C PPE1P38796 400 aa3.96□□□□□ -1.78
RPN13YLR421C THI6P41835 540 aa3.96□□□□□ -1.78
RPN13YLR421C YIP4P53093 235 aa3.96□□□□□ -1.78
RPN13YLR421C YRB30P53107 440 aaPredicted RBP3.96□□□□□ -1.78
RPN13YLR421C ATP23P53722 227 aa3.96□□□□□ -1.78
RPN13YLR421C TFB2Q02939 513 aa3.96□□□□□ -1.78
RPN13YLR421C ZPS1Q12512 249 aa3.96□□□□□ -1.78
RPN13YLR421C MLP2P40457 1679 aa3.95□□□□□ -1.78
RPN13YLR421C PMA2P19657 947 aa3.95□□□□□ -1.78
RPN13YLR421C BEM3P32873 1128 aa3.95□□□□□ -1.78
RPN13YLR421C VPS24P36095 224 aaKnown RBP3.95□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 110.8 ms