RNA–Protein interactions for RNA: YLR403W

SFP1, Transcript of Regulates transcription of ribosomal protein and biogenesis genes, yeastyeast

Gene SFP1, Length 2,052 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFP1YLR403W PRI1P10363 409 aa9.32□□□□□ -0.92
SFP1YLR403W MRPL33P20084 86 aa9.32□□□□□ -0.92
SFP1YLR403W COS111P38308 924 aa9.32□□□□□ -0.92
SFP1YLR403W SMF1P38925 575 aa9.32□□□□□ -0.92
SFP1YLR403W SER3P40054 469 aa9.32□□□□□ -0.92
SFP1YLR403W PAC11P40960 533 aa9.32□□□□□ -0.92
SFP1YLR403W NAS6P50086 228 aa9.32□□□□□ -0.92
SFP1YLR403W RNH70P53331 553 aa9.32□□□□□ -0.92
SFP1YLR403W VPS75P53853 264 aa9.32□□□□□ -0.92
SFP1YLR403W MPS1P54199 764 aa9.32□□□□□ -0.92
SFP1YLR403W YDR514CQ04408 483 aa9.32□□□□□ -0.92
SFP1YLR403W PIG1Q06216 648 aa9.32□□□□□ -0.92
SFP1YLR403W NDE2Q07500 545 aa9.32□□□□□ -0.92
SFP1YLR403W YPD1Q07688 167 aa9.32□□□□□ -0.92
SFP1YLR403W PUS7Q08647 676 aaKnown RBP9.32□□□□□ -0.92
SFP1YLR403W TMA46Q12000 345 aaKnown RBP9.32□□□□□ -0.92
SFP1YLR403W YLR278CQ05854 1341 aa9.32□□□□□ -0.92
SFP1YLR403W HIS4P00815 799 aaKnown RBP9.32□□□□□ -0.92
SFP1YLR403W RRN6P32786 894 aa9.32□□□□□ -0.92
SFP1YLR403W TPO5P36029 618 aa9.32□□□□□ -0.92
SFP1YLR403W CUE2P36075 443 aaKnown RBP9.32□□□□□ -0.92
SFP1YLR403W RDH54P38086 958 aa9.32□□□□□ -0.92
SFP1YLR403W YBR062CP38239 180 aa9.32□□□□□ -0.92
SFP1YLR403W MTG2P38860 518 aa9.32□□□□□ -0.92
SFP1YLR403W YER130CP39959 443 aa9.32□□□□□ -0.92
SFP1YLR403W EMP65P40085 556 aa9.32□□□□□ -0.92
SFP1YLR403W TFG2P41896 400 aaPredicted RBP9.32□□□□□ -0.92
SFP1YLR403W CGR1P53188 120 aa9.32□□□□□ -0.92
SFP1YLR403W MNT4P53745 580 aa9.32□□□□□ -0.92
SFP1YLR403W BUD22Q04347 519 aaKnown RBP9.32□□□□□ -0.92
SFP1YLR403W CSI1Q04368 295 aa9.32□□□□□ -0.92
SFP1YLR403W YDR286CQ05530 114 aa9.32□□□□□ -0.92
SFP1YLR403W RSC58Q07979 502 aa9.32□□□□□ -0.92
SFP1YLR403W SIL1Q08199 421 aa9.32□□□□□ -0.92
SFP1YLR403W CBP6P07253 162 aaPredicted RBP9.31□□□□□ -0.92
SFP1YLR403W PEP3P27801 918 aa9.31□□□□□ -0.92
SFP1YLR403W URA1P28272 314 aaPredicted RBP9.31□□□□□ -0.92
SFP1YLR403W PFF1P38244 976 aa9.31□□□□□ -0.92
SFP1YLR403W BUD6P41697 788 aa9.31□□□□□ -0.92
SFP1YLR403W RET3P53600 189 aa9.31□□□□□ -0.92
SFP1YLR403W GIM3P53900 129 aa9.31□□□□□ -0.92
SFP1YLR403W RRN5Q02983 363 aa9.31□□□□□ -0.92
SFP1YLR403W SPO20Q04359 397 aa9.31□□□□□ -0.92
SFP1YLR403W TAF9Q05027 157 aa9.31□□□□□ -0.92
SFP1YLR403W TRP5P00931 707 aaKnown RBP9.3□□□□□ -0.92
SFP1YLR403W GLN4P13188 809 aaKnown RBP9.3□□□□□ -0.92
SFP1YLR403W GSY2P27472 705 aa9.3□□□□□ -0.92
SFP1YLR403W DBF20P32328 564 aa9.3□□□□□ -0.92
SFP1YLR403W SRB4P32569 687 aa9.3□□□□□ -0.92
SFP1YLR403W POP7P38291 140 aa9.3□□□□□ -0.92
SFP1YLR403W BOL3P39724 118 aa9.3□□□□□ -0.92
SFP1YLR403W TIF4631P39935 952 aaKnown RBP9.3□□□□□ -0.92
SFP1YLR403W GYP8P43570 497 aa9.3□□□□□ -0.92
SFP1YLR403W YJL055WP47044 245 aa9.3□□□□□ -0.92
SFP1YLR403W TOM22P49334 152 aa9.3□□□□□ -0.92
SFP1YLR403W FOL2P51601 243 aaKnown RBP9.3□□□□□ -0.92
SFP1YLR403W VAC7P53950 1165 aa9.3□□□□□ -0.92
SFP1YLR403W GPI17Q04080 534 aa9.3□□□□□ -0.92
SFP1YLR403W VAC14Q06708 880 aa9.3□□□□□ -0.92
SFP1YLR403W NTG2Q08214 380 aa9.3□□□□□ -0.92
SFP1YLR403W BAG7Q12128 409 aa9.3□□□□□ -0.92
SFP1YLR403W HUA2Q12134 243 aa9.3□□□□□ -0.92
SFP1YLR403W ARG4P04076 463 aaPredicted RBP9.3□□□□□ -0.92
SFP1YLR403W YGL041W-AP0C5N3 154 aa9.3□□□□□ -0.92
SFP1YLR403W RPL19AP0CX82 189 aaKnown RBP9.3□□□□□ -0.92
SFP1YLR403W RPL19BP0CX83 189 aaPredicted RBP9.3□□□□□ -0.92
SFP1YLR403W SEC63P14906 663 aa9.3□□□□□ -0.92
SFP1YLR403W PTP1P25044 335 aa9.3□□□□□ -0.92
SFP1YLR403W CSE4P36012 229 aa9.3□□□□□ -0.92
SFP1YLR403W SOH1P38633 127 aa9.3□□□□□ -0.92
SFP1YLR403W SMF2P38778 549 aa9.3□□□□□ -0.92
SFP1YLR403W UTP9P38882 575 aaKnown RBP9.3□□□□□ -0.92
SFP1YLR403W ATG32P40458 529 aa9.3□□□□□ -0.92
SFP1YLR403W ABM1P47146 123 aa9.3□□□□□ -0.92
SFP1YLR403W VIP1Q06685 1146 aaKnown RBP9.3□□□□□ -0.92
SFP1YLR403W PUF3Q07807 879 aaKnown RBP RIP-Chip data9.3□□□□□ -0.92 RIP-Chip
SFP1YLR403W SET6Q12529 373 aa9.3□□□□□ -0.92
SFP1YLR403W SNF1P06782 633 aaKnown RBP9.29□□□□□ -0.92
SFP1YLR403W DBP5P20449 482 aaKnown RBP9.29□□□□□ -0.92
SFP1YLR403W YMR262WP38430 313 aa9.29□□□□□ -0.92
SFP1YLR403W SAW1P39735 261 aa9.29□□□□□ -0.92
SFP1YLR403W AIM10P39965 576 aaKnown RBP9.29□□□□□ -0.92
SFP1YLR403W GID8P40208 455 aa9.29□□□□□ -0.92
SFP1YLR403W JEM1P40358 645 aa9.29□□□□□ -0.92
SFP1YLR403W RRP46P53256 223 aaPredicted RBP9.29□□□□□ -0.92
SFP1YLR403W YNL146WP53906 100 aa9.29□□□□□ -0.92
SFP1YLR403W KAR5Q04746 504 aa9.29□□□□□ -0.92
SFP1YLR403W DOP1Q03921 1698 aa9.29□□□□□ -0.92
SFP1YLR403W PAB1P04147 577 aaKnown RBP RIP-Chip data9.28□□□□□ -0.92not detected
SFP1YLR403W COQ8P27697 501 aa9.28□□□□□ -0.92
SFP1YLR403W ICL1P28240 557 aaPredicted RBP9.28□□□□□ -0.92
SFP1YLR403W NTG1P31378 399 aa9.28□□□□□ -0.92
SFP1YLR403W MRS6P32864 603 aaKnown RBP9.28□□□□□ -0.92
SFP1YLR403W SDS22P36047 338 aa9.28□□□□□ -0.92
SFP1YLR403W STV1P37296 890 aa9.28□□□□□ -0.92
SFP1YLR403W YHR112CP38716 378 aa9.28□□□□□ -0.92
SFP1YLR403W LNP1P38878 278 aa9.28□□□□□ -0.92
SFP1YLR403W SWP82P43554 623 aa9.28□□□□□ -0.92
SFP1YLR403W REC102Q02721 264 aa9.28□□□□□ -0.92
SFP1YLR403W SAM3Q08986 587 aa9.28□□□□□ -0.92
Retrieved 100 of 5,963 RNA–protein pairs in 95.2 ms