RNA–Protein interactions for RNA: YLR397C

AFG2, Transcript of ATPase of the CDC48/PAS1/SEC18 (AAA) family, forms a hexameric complex, yeastyeast

Gene AFG2, Length 2,343 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AFG2YLR397C VMA4P22203 233 aaKnown RBP7.56□□□□□ -1.2
AFG2YLR397C SPB1P25582 841 aaPredicted RBP7.56□□□□□ -1.2
AFG2YLR397C CCT3P39077 534 aaKnown RBP7.56□□□□□ -1.2
AFG2YLR397C PAC11P40960 533 aa7.56□□□□□ -1.2
AFG2YLR397C QRI1P43123 477 aaKnown RBP7.56□□□□□ -1.2
AFG2YLR397C DSD1P53095 428 aa7.56□□□□□ -1.2
AFG2YLR397C MET13P53128 600 aa7.56□□□□□ -1.2
AFG2YLR397C RGA2Q06407 1009 aa7.56□□□□□ -1.2
AFG2YLR397C BAG7Q12128 409 aa7.56□□□□□ -1.2
AFG2YLR397C ZIP1P31111 875 aa7.55□□□□□ -1.2
AFG2YLR397C SSO1P32867 290 aa7.55□□□□□ -1.2
AFG2YLR397C RPT5P33297 434 aaKnown RBP7.55□□□□□ -1.2
AFG2YLR397C RPC25P35718 212 aa7.55□□□□□ -1.2
AFG2YLR397C MTG2P38860 518 aa7.55□□□□□ -1.2
AFG2YLR397C RTS2P40962 232 aa7.55□□□□□ -1.2
AFG2YLR397C YJL055WP47044 245 aa7.55□□□□□ -1.2
AFG2YLR397C USE1P53146 245 aa7.55□□□□□ -1.2
AFG2YLR397C MPS1P54199 764 aa7.55□□□□□ -1.2
AFG2YLR397C TMA20P89886 181 aaPredicted RBP7.55□□□□□ -1.2
AFG2YLR397C CYB2P00175 591 aa7.55□□□□□ -1.2
AFG2YLR397C PRP9P19736 530 aaKnown RBP7.55□□□□□ -1.2
AFG2YLR397C SAS3P34218 831 aa7.55□□□□□ -1.2
AFG2YLR397C YBL055CP34220 418 aaPredicted RBP7.55□□□□□ -1.2
AFG2YLR397C GLY1P37303 387 aaKnown RBP7.55□□□□□ -1.2
AFG2YLR397C PDX3P38075 228 aaKnown RBP7.55□□□□□ -1.2
AFG2YLR397C CCT6P39079 546 aa7.55□□□□□ -1.2
AFG2YLR397C RCY1P39531 840 aa7.55□□□□□ -1.2
AFG2YLR397C BUD6P41697 788 aa7.55□□□□□ -1.2
AFG2YLR397C GSM1P42950 618 aa7.55□□□□□ -1.2
AFG2YLR397C LYS4P49367 693 aaPredicted RBP7.55□□□□□ -1.2
AFG2YLR397C ASI2P53895 289 aa7.55□□□□□ -1.2
AFG2YLR397C DIG1Q03063 452 aaKnown RBP7.55□□□□□ -1.2
AFG2YLR397C YLR031WQ07978 186 aa7.55□□□□□ -1.2
AFG2YLR397C CWC2Q12046 339 aaPredicted RBP7.55□□□□□ -1.2
AFG2YLR397C FAS2P19097 1887 aaKnown RBP7.54□□□□□ -1.2
AFG2YLR397C URB1P34241 1764 aaKnown RBP7.54□□□□□ -1.2
AFG2YLR397C CBP6P07253 162 aaPredicted RBP7.54□□□□□ -1.2
AFG2YLR397C GLN4P13188 809 aaKnown RBP7.54□□□□□ -1.2
AFG2YLR397C POL3P15436 1097 aa7.54□□□□□ -1.2
AFG2YLR397C PMA2P19657 947 aa7.54□□□□□ -1.2
AFG2YLR397C VPS3P23643 1011 aa7.54□□□□□ -1.2
AFG2YLR397C RVS161P25343 265 aaKnown RBP7.54□□□□□ -1.2
AFG2YLR397C RFC3P38629 340 aa7.54□□□□□ -1.2
AFG2YLR397C ATG32P40458 529 aa7.54□□□□□ -1.2
AFG2YLR397C YNR063WP53749 607 aa7.54□□□□□ -1.2
AFG2YLR397C GOR1P53839 350 aa7.54□□□□□ -1.2
AFG2YLR397C CCP1P00431 361 aa7.53□□□□□ -1.2
AFG2YLR397C HXK1P04806 485 aaKnown RBP7.53□□□□□ -1.2
AFG2YLR397C KIN3P22209 435 aa7.53□□□□□ -1.2
AFG2YLR397C CWH43P25618 953 aa7.53□□□□□ -1.2
AFG2YLR397C YBR138CP38277 524 aa7.53□□□□□ -1.2
AFG2YLR397C VMA7P39111 118 aa7.53□□□□□ -1.2
AFG2YLR397C NMD5P46970 1048 aa7.53□□□□□ -1.2
AFG2YLR397C YDR514CQ04408 483 aa7.53□□□□□ -1.2
AFG2YLR397C VIP1Q06685 1146 aaKnown RBP7.53□□□□□ -1.2
AFG2YLR397C MLH2Q07980 695 aa7.53□□□□□ -1.2
AFG2YLR397C NEW1Q08972 1196 aaKnown RBP7.53□□□□□ -1.2
AFG2YLR397C ERP4Q12450 207 aa7.53□□□□□ -1.2
AFG2YLR397C TUB1P09733 447 aaKnown RBP7.53□□□□□ -1.2
AFG2YLR397C VPS34P22543 875 aa7.53□□□□□ -1.2
AFG2YLR397C GBP2P25555 427 aaKnown RBP RIP-Chip data7.53□□□□□ -1.2not detected
AFG2YLR397C GCG1P32656 232 aaKnown RBP7.53□□□□□ -1.2
AFG2YLR397C PRP40P33203 583 aaKnown RBP7.53□□□□□ -1.2
AFG2YLR397C PTC3P34221 468 aaKnown RBP7.53□□□□□ -1.2
AFG2YLR397C SET3P36124 751 aa7.53□□□□□ -1.2
AFG2YLR397C YBR139WP38109 508 aa7.53□□□□□ -1.2
AFG2YLR397C NOP16P40007 231 aaKnown RBP7.53□□□□□ -1.2
AFG2YLR397C ALD5P40047 520 aaKnown RBP7.53□□□□□ -1.2
AFG2YLR397C LYS14P40971 790 aa7.53□□□□□ -1.2
AFG2YLR397C IES1P43579 692 aa7.53□□□□□ -1.2
AFG2YLR397C NAS6P50086 228 aa7.53□□□□□ -1.2
AFG2YLR397C YGR237CP50089 785 aa7.53□□□□□ -1.2
AFG2YLR397C CPR6P53691 371 aaKnown RBP7.53□□□□□ -1.2
AFG2YLR397C DLT1Q04216 342 aa7.53□□□□□ -1.2
AFG2YLR397C ATG38Q05789 226 aaKnown RBP7.53□□□□□ -1.2
AFG2YLR397C DNF3Q12674 1656 aa7.53□□□□□ -1.2
AFG2YLR397C ERG12P07277 443 aa7.52□□□□□ -1.2
AFG2YLR397C GPI10P30777 616 aa7.52□□□□□ -1.2
AFG2YLR397C DBF20P32328 564 aa7.52□□□□□ -1.2
AFG2YLR397C SFA1P32771 386 aa7.52□□□□□ -1.2
AFG2YLR397C BLI1P35727 113 aa7.52□□□□□ -1.2
AFG2YLR397C UTP30P36144 274 aaKnown RBP7.52□□□□□ -1.2
AFG2YLR397C PPS1P38148 807 aa7.52□□□□□ -1.2
AFG2YLR397C STP2P38704 541 aa7.52□□□□□ -1.2
AFG2YLR397C DIA4P38705 446 aaPredicted RBP7.52□□□□□ -1.2
AFG2YLR397C TDA3P38758 523 aa7.52□□□□□ -1.2
AFG2YLR397C CTM1P38818 585 aa7.52□□□□□ -1.2
AFG2YLR397C YJR061WP40355 935 aa7.52□□□□□ -1.2
AFG2YLR397C XKS1P42826 600 aa7.52□□□□□ -1.2
AFG2YLR397C MSE1P48525 536 aa7.52□□□□□ -1.2
AFG2YLR397C SAS4Q04003 481 aa7.52□□□□□ -1.2
AFG2YLR397C UTP5Q04177 643 aaKnown RBP7.52□□□□□ -1.2
AFG2YLR397C GIS4Q04233 774 aa7.52□□□□□ -1.2
AFG2YLR397C SPO20Q04359 397 aa7.52□□□□□ -1.2
AFG2YLR397C HRK1Q08732 759 aaKnown RBP7.52□□□□□ -1.2
AFG2YLR397C HUA2Q12134 243 aa7.52□□□□□ -1.2
AFG2YLR397C FMP16Q12497 93 aa7.52□□□□□ -1.2
AFG2YLR397C YLR278CQ05854 1341 aa7.52□□□□□ -1.21
AFG2YLR397C GRX2P17695 143 aaKnown RBP7.52□□□□□ -1.21
AFG2YLR397C RPS5P26783 225 aaKnown RBP7.52□□□□□ -1.21
Retrieved 100 of 5,963 RNA–protein pairs in 41.8 ms