RNA–Protein interactions for RNA: YLR260W

LCB5, Transcript of Minor sphingoid long-chain base kinase, yeastyeast

Gene LCB5, Length 2,064 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCB5YLR260W APN1P22936 367 aa3.85□□□□□ -1.79
LCB5YLR260W POL4P25615 582 aa3.85□□□□□ -1.79
LCB5YLR260W IME2P32581 645 aa3.85□□□□□ -1.79
LCB5YLR260W YBR284WP38150 797 aa3.85□□□□□ -1.79
LCB5YLR260W KSP1P38691 1029 aaKnown RBP3.85□□□□□ -1.79
LCB5YLR260W MBP1P39678 833 aa3.85□□□□□ -1.79
LCB5YLR260W VHR1P40522 640 aa3.85□□□□□ -1.79
LCB5YLR260W AXL1P40851 1208 aa3.85□□□□□ -1.79
LCB5YLR260W SBE2P42223 864 aaKnown RBP3.85□□□□□ -1.79
LCB5YLR260W GZF3P42944 551 aaKnown RBP3.85□□□□□ -1.79
LCB5YLR260W SET2P46995 733 aaKnown RBP3.85□□□□□ -1.79
LCB5YLR260W MDE1P47095 244 aa3.85□□□□□ -1.79
LCB5YLR260W RNR4P49723 345 aaKnown RBP3.85□□□□□ -1.79
LCB5YLR260W YVH1Q02256 364 aaKnown RBP3.85□□□□□ -1.79
LCB5YLR260W BLS1Q06071 122 aa3.85□□□□□ -1.79
LCB5YLR260W SPH1Q06160 661 aa3.85□□□□□ -1.79
LCB5YLR260W TFC6Q06339 672 aa3.85□□□□□ -1.79
LCB5YLR260W ADY3Q07732 790 aa3.85□□□□□ -1.79
LCB5YLR260W MET7Q08645 548 aa3.85□□□□□ -1.79
LCB5YLR260W YOL114CQ12322 202 aa3.85□□□□□ -1.79
LCB5YLR260W RRP36Q12481 300 aaPredicted RBP3.85□□□□□ -1.79
LCB5YLR260W RAD50P12753 1312 aa3.85□□□□□ -1.79
LCB5YLR260W FPS1P23900 669 aa3.85□□□□□ -1.79
LCB5YLR260W PYC2P32327 1180 aaKnown RBP3.85□□□□□ -1.79
LCB5YLR260W RGT1P32862 1170 aa3.85□□□□□ -1.79
LCB5YLR260W PAN5P38787 379 aa3.85□□□□□ -1.79
LCB5YLR260W SIT1P39980 628 aa3.85□□□□□ -1.79
LCB5YLR260W UBP6P43593 499 aaKnown RBP3.85□□□□□ -1.79
LCB5YLR260W YJL055WP47044 245 aa3.85□□□□□ -1.79
LCB5YLR260W PPT1P53043 513 aa3.85□□□□□ -1.79
LCB5YLR260W YGR250CP53316 781 aaKnown RBP3.85□□□□□ -1.79
LCB5YLR260W MOT3P54785 490 aaKnown RBP3.85□□□□□ -1.79
LCB5YLR260W YPL034WQ03083 165 aa3.85□□□□□ -1.79
LCB5YLR260W RAD33Q04231 177 aa3.85□□□□□ -1.79
LCB5YLR260W GSF2Q04697 403 aaKnown RBP3.85□□□□□ -1.79
LCB5YLR260W YSH1Q06224 779 aaPredicted RBP3.85□□□□□ -1.79
LCB5YLR260W CUE5Q08412 411 aaKnown RBP3.85□□□□□ -1.79
LCB5YLR260W YDL176WQ12027 708 aa3.85□□□□□ -1.79
LCB5YLR260W BI4P03879 638 aa3.84□□□□□ -1.79
LCB5YLR260W VAS1P07806 1104 aaKnown RBP3.84□□□□□ -1.79
LCB5YLR260W YER152CP10356 443 aa3.84□□□□□ -1.79
LCB5YLR260W INO1P11986 533 aa3.84□□□□□ -1.79
LCB5YLR260W MAK31P23059 88 aa3.84□□□□□ -1.79
LCB5YLR260W SRO9P25567 434 aaKnown RBP3.84□□□□□ -1.79
LCB5YLR260W MTH1P35198 433 aa3.84□□□□□ -1.79
LCB5YLR260W SKI2P35207 1287 aaKnown RBP RIP-Chip data3.84□□□□□ -1.79not detected
LCB5YLR260W MCR1P36060 302 aaKnown RBP3.84□□□□□ -1.79
LCB5YLR260W BYE1P36106 594 aa3.84□□□□□ -1.79
LCB5YLR260W MCM7P38132 845 aa3.84□□□□□ -1.79
LCB5YLR260W CRG1P38892 291 aaRIP-Chip data3.84□□□□□ -1.79not detected
LCB5YLR260W SKP2P42843 763 aa3.84□□□□□ -1.79
LCB5YLR260W ADE12P80210 433 aaKnown RBP3.84□□□□□ -1.79
LCB5YLR260W RPT6Q01939 405 aaKnown RBP3.84□□□□□ -1.79
LCB5YLR260W VTC3Q02725 835 aa3.84□□□□□ -1.79
LCB5YLR260W HOT1Q03213 719 aa3.84□□□□□ -1.79
LCB5YLR260W ECM38Q05902 660 aaPredicted RBP3.84□□□□□ -1.79
LCB5YLR260W SYT1Q06836 1226 aa3.84□□□□□ -1.79
LCB5YLR260W REX3Q12090 404 aa3.84□□□□□ -1.79
LCB5YLR260W FKS1P38631 1876 aaKnown RBP3.84□□□□□ -1.79
LCB5YLR260W HEM13P11353 328 aaKnown RBP3.83□□□□□ -1.8
LCB5YLR260W COX11P19516 300 aaKnown RBP3.83□□□□□ -1.8
LCB5YLR260W REC107P21651 314 aa3.83□□□□□ -1.8
LCB5YLR260W CDC48P25694 835 aaKnown RBP3.83□□□□□ -1.8
LCB5YLR260W GAR1P28007 205 aaKnown RBP3.83□□□□□ -1.8
LCB5YLR260W DBF4P32325 704 aa3.83□□□□□ -1.8
LCB5YLR260W NPL6P32832 435 aa3.83□□□□□ -1.8
LCB5YLR260W DUR3P33413 735 aa3.83□□□□□ -1.8
LCB5YLR260W YEL1P34225 687 aa3.83□□□□□ -1.8
LCB5YLR260W SEG2P34250 1132 aa3.83□□□□□ -1.8
LCB5YLR260W MDJ1P35191 511 aa3.83□□□□□ -1.8
LCB5YLR260W FLR1P38124 548 aa3.83□□□□□ -1.8
LCB5YLR260W VPS45P38932 577 aa3.83□□□□□ -1.8
LCB5YLR260W CEM1P39525 442 aa3.83□□□□□ -1.8
LCB5YLR260W YEL068CP39977 110 aa3.83□□□□□ -1.8
LCB5YLR260W GCD10P41814 478 aa3.83□□□□□ -1.8
LCB5YLR260W LEM3P42838 414 aa3.83□□□□□ -1.8
LCB5YLR260W MNN11P46985 422 aaKnown RBP3.83□□□□□ -1.8
LCB5YLR260W VPS53P47061 822 aa3.83□□□□□ -1.8
LCB5YLR260W RSM26P47141 266 aa3.83□□□□□ -1.8
LCB5YLR260W LYS5P50113 272 aa3.83□□□□□ -1.8
LCB5YLR260W OCA1P50946 238 aaPredicted RBP3.83□□□□□ -1.8
LCB5YLR260W GUP1P53154 560 aa3.83□□□□□ -1.8
LCB5YLR260W ALF1P53904 254 aa3.83□□□□□ -1.8
LCB5YLR260W CEG1Q01159 459 aaPredicted RBP3.83□□□□□ -1.8
LCB5YLR260W PTA1Q01329 785 aaPredicted RBP3.83□□□□□ -1.8
LCB5YLR260W MSH6Q03834 1242 aa3.83□□□□□ -1.8
LCB5YLR260W TY1A-DR2Q03964 440 aaKnown RBP3.83□□□□□ -1.8
LCB5YLR260W UTP21Q06078 939 aaPredicted RBP3.83□□□□□ -1.8
LCB5YLR260W YLH47Q06493 454 aa3.83□□□□□ -1.8
LCB5YLR260W GUD1Q07729 489 aa3.83□□□□□ -1.8
LCB5YLR260W MRN1Q08925 612 aaKnown RBP RIP-Chip data3.83□□□□□ -1.8not detected
LCB5YLR260W YDR034W-BQ6Q5X2 51 aa3.83□□□□□ -1.8
LCB5YLR260W YOR111WQ99210 232 aa3.83□□□□□ -1.8
LCB5YLR260W TFB1P32776 642 aa3.83□□□□□ -1.8
LCB5YLR260W SQT1P35184 431 aa3.83□□□□□ -1.8
LCB5YLR260W RTT105P40063 208 aa3.83□□□□□ -1.8
LCB5YLR260W LSM5P40089 93 aaKnown RBP3.83□□□□□ -1.8
LCB5YLR260W PCL7P40186 285 aa3.83□□□□□ -1.8
LCB5YLR260W RAD26P40352 1085 aa3.83□□□□□ -1.8
LCB5YLR260W PRK1P40494 810 aa3.83□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 11 ms