RNA–Protein interactions for RNA: YKR098C

UBP11, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP11, Length 2,154 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP11YKR098C PEX1P24004 1043 aa2.63□□□□□ -1.99
UBP11YKR098C MCM10P32354 571 aa2.63□□□□□ -1.99
UBP11YKR098C CRG1P38892 291 aaRIP-Chip data2.63□□□□□ -1.99not detected
UBP11YKR098C FTR1P40088 404 aa2.63□□□□□ -1.99
UBP11YKR098C PUG1P40100 303 aa2.63□□□□□ -1.99
UBP11YKR098C FKH2P41813 862 aa2.63□□□□□ -1.99
UBP11YKR098C SQS1P53866 767 aaKnown RBP2.63□□□□□ -1.99
UBP11YKR098C RGC1Q06108 1083 aaKnown RBP2.63□□□□□ -1.99
UBP11YKR098C THI22Q06490 572 aa2.63□□□□□ -1.99
UBP11YKR098C ENB1Q08299 606 aa2.63□□□□□ -1.99
UBP11YKR098C DIA2Q08496 732 aaPredicted RBP2.63□□□□□ -1.99
UBP11YKR098C NEW1Q08972 1196 aaKnown RBP2.63□□□□□ -1.99
UBP11YKR098C RRI2Q12348 645 aa2.63□□□□□ -1.99
UBP11YKR098C SSM4P40318 1319 aa2.63□□□□□ -1.99
UBP11YKR098C PHO5P00635 467 aa2.63□□□□□ -1.99
UBP11YKR098C RPS9BP05755 195 aaKnown RBP2.63□□□□□ -1.99
UBP11YKR098C MTF2P10849 440 aa2.63□□□□□ -1.99
UBP11YKR098C LAT1P12695 482 aaKnown RBP2.63□□□□□ -1.99
UBP11YKR098C YCL049CP25577 312 aa2.63□□□□□ -1.99
UBP11YKR098C RPN12P32496 274 aa2.63□□□□□ -1.99
UBP11YKR098C SEG2P34250 1132 aa2.63□□□□□ -1.99
UBP11YKR098C AIM3P38266 947 aaKnown RBP2.63□□□□□ -1.99
UBP11YKR098C CCT3P39077 534 aaKnown RBP2.63□□□□□ -1.99
UBP11YKR098C HOS4P40480 1083 aa2.63□□□□□ -1.99
UBP11YKR098C BNA1P47096 177 aa2.63□□□□□ -1.99
UBP11YKR098C TAH11P47112 604 aa2.63□□□□□ -1.99
UBP11YKR098C UBA2P52488 636 aa2.63□□□□□ -1.99
UBP11YKR098C SPO1P53541 631 aa2.63□□□□□ -1.99
UBP11YKR098C YCG1Q06680 1035 aa2.63□□□□□ -1.99
UBP11YKR098C CDA2Q06703 312 aa2.63□□□□□ -1.99
UBP11YKR098C YOL087CQ99247 1116 aa2.63□□□□□ -1.99
UBP11YKR098C TRP4P07285 380 aaPredicted RBP2.62□□□□□ -1.99
UBP11YKR098C POL3P15436 1097 aa2.62□□□□□ -1.99
UBP11YKR098C SIR1P21691 654 aa2.62□□□□□ -1.99
UBP11YKR098C XRS2P33301 854 aa2.62□□□□□ -1.99
UBP11YKR098C FMO1P38866 432 aa2.62□□□□□ -1.99
UBP11YKR098C SMK1P41808 388 aa2.62□□□□□ -1.99
UBP11YKR098C AMA1P50082 593 aa2.62□□□□□ -1.99
UBP11YKR098C NRD1P53617 575 aaKnown RBP RIP-Chip data2.62□□□□□ -1.99not detected
UBP11YKR098C MRPL13Q02204 264 aa2.62□□□□□ -1.99
UBP11YKR098C TFC6Q06339 672 aa2.62□□□□□ -1.99
UBP11YKR098C OPY2Q06810 360 aa2.62□□□□□ -1.99
UBP11YKR098C IWR1Q07532 353 aaPredicted RBP2.62□□□□□ -1.99
UBP11YKR098C AAD4Q07747 329 aa2.62□□□□□ -1.99
UBP11YKR098C HOS1Q12214 470 aa2.62□□□□□ -1.99
UBP11YKR098C MIS1P09440 975 aaKnown RBP2.61□□□□□ -1.99
UBP11YKR098C FRD1P32614 470 aaKnown RBP2.61□□□□□ -1.99
UBP11YKR098C BCS1P32839 456 aa2.61□□□□□ -1.99
UBP11YKR098C YBR053CP38235 358 aa2.61□□□□□ -1.99
UBP11YKR098C EHT1P38295 451 aa2.61□□□□□ -1.99
UBP11YKR098C COS111P38308 924 aa2.61□□□□□ -1.99
UBP11YKR098C PPE1P38796 400 aa2.61□□□□□ -1.99
UBP11YKR098C NUP60P39705 539 aa2.61□□□□□ -1.99
UBP11YKR098C MNT3P40549 630 aa2.61□□□□□ -1.99
UBP11YKR098C RIM8P53179 542 aa2.61□□□□□ -1.99
UBP11YKR098C MDR1P53258 950 aa2.61□□□□□ -1.99
UBP11YKR098C MEP3P53390 489 aa2.61□□□□□ -1.99
UBP11YKR098C ACS1Q01574 713 aa2.61□□□□□ -1.99
UBP11YKR098C TMA10Q06177 86 aa2.61□□□□□ -1.99
UBP11YKR098C YFT2Q06676 274 aa2.61□□□□□ -1.99
UBP11YKR098C TUF1P02992 437 aaKnown RBP2.61□□□□□ -1.99
UBP11YKR098C SNF1P06782 633 aaKnown RBP2.61□□□□□ -1.99
UBP11YKR098C TUP1P16649 713 aa2.61□□□□□ -1.99
UBP11YKR098C PRE10P21242 288 aaKnown RBP RIP-Chip data2.61□□□□□ -1.99not detected
UBP11YKR098C GAS1P22146 559 aaKnown RBP2.61□□□□□ -1.99
UBP11YKR098C SEC15P22224 910 aa2.61□□□□□ -1.99
UBP11YKR098C CLB4P24871 460 aa2.61□□□□□ -1.99
UBP11YKR098C GFD2P25370 566 aaKnown RBP2.61□□□□□ -1.99
UBP11YKR098C RER1P25560 188 aa2.61□□□□□ -1.99
UBP11YKR098C FEN2P25621 512 aaKnown RBP2.61□□□□□ -1.99
UBP11YKR098C RRN3P36070 627 aa2.61□□□□□ -1.99
UBP11YKR098C RAD26P40352 1085 aa2.61□□□□□ -1.99
UBP11YKR098C YIR042CP40586 236 aa2.61□□□□□ -1.99
UBP11YKR098C GSM1P42950 618 aa2.61□□□□□ -1.99
UBP11YKR098C BUL1P48524 976 aa2.61□□□□□ -1.99
UBP11YKR098C MUP1P50276 574 aa2.61□□□□□ -1.99
UBP11YKR098C FDC1Q03034 503 aa2.61□□□□□ -1.99
UBP11YKR098C CRD1Q07560 283 aa2.61□□□□□ -1.99
UBP11YKR098C YDR056CQ12025 205 aa2.61□□□□□ -1.99
UBP11YKR098C CLF1Q12309 687 aaPredicted RBP2.61□□□□□ -1.99
UBP11YKR098C ADE3P07245 946 aaKnown RBP2.6□□□□□ -1.99
UBP11YKR098C NUC1P08466 329 aa2.6□□□□□ -1.99
UBP11YKR098C HSC82P15108 705 aaKnown RBP2.6□□□□□ -1.99
UBP11YKR098C PRP6P19735 899 aaPredicted RBP2.6□□□□□ -1.99
UBP11YKR098C UBC1P21734 215 aaKnown RBP2.6□□□□□ -1.99
UBP11YKR098C STE11P23561 717 aa2.6□□□□□ -1.99
UBP11YKR098C SWI4P25302 1093 aaKnown RBP2.6□□□□□ -1.99
UBP11YKR098C CHS3P29465 1165 aa2.6□□□□□ -1.99
UBP11YKR098C DCG1P32460 244 aa2.6□□□□□ -1.99
UBP11YKR098C TOD6P34219 525 aa2.6□□□□□ -1.99
UBP11YKR098C YBR138CP38277 524 aa2.6□□□□□ -1.99
UBP11YKR098C IFA38P38286 347 aa2.6□□□□□ -1.99
UBP11YKR098C SFB3P38810 929 aa2.6□□□□□ -1.99
UBP11YKR098C YIL077CP40508 320 aa2.6□□□□□ -1.99
UBP11YKR098C POL31P46957 487 aa2.6□□□□□ -1.99
UBP11YKR098C TIM50Q02776 476 aa2.6□□□□□ -1.99
UBP11YKR098C DLT1Q04216 342 aa2.6□□□□□ -1.99
UBP11YKR098C TRM8Q12009 286 aa2.6□□□□□ -1.99
UBP11YKR098C AIM41Q12032 185 aa2.6□□□□□ -1.99
UBP11YKR098C CAF20P12962 161 aaKnown RBP2.6□□□□□ -1.99
Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms