RNA–Protein interactions for RNA: YKR086W

PRP16, Transcript of DEAH-box RNA helicase involved in second catalytic step of splicing and in exon ligation, yeastyeast

Gene PRP16, Length 3,216 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP16YKR086W GFD2P25370 566 aaKnown RBP1.3□□□□□ -2.2
PRP16YKR086W MRPL9P31334 269 aa1.3□□□□□ -2.2
PRP16YKR086W FMO1P38866 432 aa1.3□□□□□ -2.2
PRP16YKR086W ECM1P39715 212 aa1.3□□□□□ -2.2
PRP16YKR086W VPS73P53142 486 aaKnown RBP1.3□□□□□ -2.2
PRP16YKR086W SPC98P53540 846 aa1.3□□□□□ -2.2
PRP16YKR086W PTA1Q01329 785 aaPredicted RBP1.3□□□□□ -2.2
PRP16YKR086W YML122CQ03207 126 aa1.3□□□□□ -2.2
PRP16YKR086W ENT2Q05785 613 aa1.3□□□□□ -2.2
PRP16YKR086W VHS3Q08438 674 aa1.3□□□□□ -2.2
PRP16YKR086W NDJ1Q12366 352 aa1.3□□□□□ -2.2
PRP16YKR086W ECM3Q99252 613 aa1.3□□□□□ -2.2
PRP16YKR086W LEU2P04173 364 aaPredicted RBP1.3□□□□□ -2.2
PRP16YKR086W HMG1P12683 1054 aa1.3□□□□□ -2.2
PRP16YKR086W SFL1P20134 766 aa1.3□□□□□ -2.2
PRP16YKR086W RPA135P22138 1203 aaKnown RBP1.3□□□□□ -2.2
PRP16YKR086W SPO11P23179 398 aa1.3□□□□□ -2.2
PRP16YKR086W MSH2P25847 964 aa1.3□□□□□ -2.2
PRP16YKR086W RIM4P38741 713 aa1.3□□□□□ -2.2
PRP16YKR086W YHL017WP38745 532 aa1.3□□□□□ -2.2
PRP16YKR086W MIP6P38760 659 aaKnown RBP1.3□□□□□ -2.2
PRP16YKR086W FMP52P40008 231 aa1.3□□□□□ -2.2
PRP16YKR086W YGR237CP50089 785 aa1.3□□□□□ -2.2
PRP16YKR086W MTL1P53214 551 aa1.3□□□□□ -2.2
PRP16YKR086W ARG5,6Q01217 863 aa1.3□□□□□ -2.2
PRP16YKR086W VPS72Q03388 795 aa1.3□□□□□ -2.2
PRP16YKR086W HFD1Q04458 532 aa1.3□□□□□ -2.2
PRP16YKR086W YLR001CQ07895 862 aa1.3□□□□□ -2.2
PRP16YKR086W MLH3Q12083 715 aa1.3□□□□□ -2.2
PRP16YKR086W PYC1P11154 1178 aaKnown RBP1.29□□□□□ -2.2
PRP16YKR086W UME6P39001 836 aa1.29□□□□□ -2.2
PRP16YKR086W ATF1P40353 525 aa1.29□□□□□ -2.2
PRP16YKR086W RNR4P49723 345 aaKnown RBP1.29□□□□□ -2.2
PRP16YKR086W SNP1Q00916 300 aaPredicted RBP1.29□□□□□ -2.2
PRP16YKR086W MFM1Q02783 413 aa1.29□□□□□ -2.2
PRP16YKR086W YOR389WQ08912 624 aa1.29□□□□□ -2.2
PRP16YKR086W MHP1P43638 1398 aa1.29□□□□□ -2.2
PRP16YKR086W YML133CQ03099 1374 aa1.29□□□□□ -2.2
PRP16YKR086W YLL067CQ07888 1374 aa1.29□□□□□ -2.2
PRP16YKR086W YPT1P01123 206 aaKnown RBP1.29□□□□□ -2.2
PRP16YKR086W SEC12P11655 471 aa1.29□□□□□ -2.2
PRP16YKR086W SEC65P29478 273 aa1.29□□□□□ -2.2
PRP16YKR086W SET3P36124 751 aa1.29□□□□□ -2.2
PRP16YKR086W SFB3P38810 929 aa1.29□□□□□ -2.2
PRP16YKR086W VPS27P40343 622 aaKnown RBP1.29□□□□□ -2.2
PRP16YKR086W CAF16P43569 289 aa1.29□□□□□ -2.2
PRP16YKR086W AMA1P50082 593 aa1.29□□□□□ -2.2
PRP16YKR086W SPC105P53148 917 aa1.29□□□□□ -2.2
PRP16YKR086W BRE5P53741 515 aaKnown RBP1.29□□□□□ -2.2
PRP16YKR086W UTP14Q04500 899 aaKnown RBP1.29□□□□□ -2.2
PRP16YKR086W NOP14Q99207 810 aaKnown RBP1.29□□□□□ -2.2
PRP16YKR086W ERG20P08524 352 aaKnown RBP1.28□□□□□ -2.2
PRP16YKR086W STE12P13574 688 aa1.28□□□□□ -2.2
PRP16YKR086W ABF1P14164 731 aa1.28□□□□□ -2.2
PRP16YKR086W IME1P21190 360 aa1.28□□□□□ -2.2
PRP16YKR086W CDC60P26637 1090 aaKnown RBP1.28□□□□□ -2.2
PRP16YKR086W MIT1P40002 666 aa1.28□□□□□ -2.2
PRP16YKR086W YNL195CP40168 261 aa1.28□□□□□ -2.2
PRP16YKR086W PIG2P40187 538 aa1.28□□□□□ -2.2
PRP16YKR086W TEL2P53038 688 aa1.28□□□□□ -2.2
PRP16YKR086W LGE1Q02796 332 aaKnown RBP1.28□□□□□ -2.2
PRP16YKR086W DCS2Q12123 353 aa1.28□□□□□ -2.2
PRP16YKR086W THR1P17423 357 aaKnown RBP1.28□□□□□ -2.2
PRP16YKR086W ADY2P25613 283 aa1.28□□□□□ -2.2
PRP16YKR086W PCL2P25693 308 aa1.28□□□□□ -2.2
PRP16YKR086W SWC3P31376 625 aa1.28□□□□□ -2.2
PRP16YKR086W YKR051WP36142 418 aa1.28□□□□□ -2.2
PRP16YKR086W YIR042CP40586 236 aa1.28□□□□□ -2.2
PRP16YKR086W PMT3P47190 753 aa1.28□□□□□ -2.2
PRP16YKR086W SNF12P53628 566 aa1.28□□□□□ -2.2
PRP16YKR086W YNL193WP53870 558 aa1.28□□□□□ -2.2
PRP16YKR086W HIM1Q06674 414 aa1.28□□□□□ -2.2
PRP16YKR086W AIM41Q12032 185 aa1.28□□□□□ -2.2
PRP16YKR086W YPR027CQ12079 277 aa1.28□□□□□ -2.2
PRP16YKR086W MDM20Q12387 796 aaKnown RBP1.28□□□□□ -2.2
PRP16YKR086W ATG11Q12527 1178 aa1.28□□□□□ -2.2
PRP16YKR086W CTT1P06115 562 aa1.28□□□□□ -2.21
PRP16YKR086W MRS6P32864 603 aaKnown RBP1.28□□□□□ -2.21
PRP16YKR086W YKR018CP36114 725 aa1.28□□□□□ -2.21
PRP16YKR086W MTG2P38860 518 aa1.28□□□□□ -2.21
PRP16YKR086W YJR008WP47085 338 aa1.28□□□□□ -2.21
PRP16YKR086W YJR096WP47137 282 aa1.28□□□□□ -2.21
PRP16YKR086W YJR142WP47173 342 aa1.28□□□□□ -2.21
PRP16YKR086W PAN2P53010 1115 aaPredicted RBP1.28□□□□□ -2.21
PRP16YKR086W UME1Q03010 460 aa1.28□□□□□ -2.21
PRP16YKR086W RCR2Q03446 210 aaKnown RBP1.28□□□□□ -2.21
PRP16YKR086W ARO10Q06408 635 aa1.28□□□□□ -2.21
PRP16YKR086W THI22Q06490 572 aa1.28□□□□□ -2.21
PRP16YKR086W THI73Q07904 523 aa1.28□□□□□ -2.21
PRP16YKR086W ROM2P51862 1356 aaKnown RBP1.28□□□□□ -2.21
PRP16YKR086W SRD1P09007 221 aa1.27□□□□□ -2.21
PRP16YKR086W PRE8P23639 250 aa1.27□□□□□ -2.21
PRP16YKR086W DMC1P25453 334 aa1.27□□□□□ -2.21
PRP16YKR086W HOG1P32485 435 aa1.27□□□□□ -2.21
PRP16YKR086W TFC3P34111 1160 aa1.27□□□□□ -2.21
PRP16YKR086W APL2P36000 726 aaPredicted RBP1.27□□□□□ -2.21
PRP16YKR086W SSZ1P38788 538 aaKnown RBP1.27□□□□□ -2.21
PRP16YKR086W YHR202WP38887 602 aa1.27□□□□□ -2.21
PRP16YKR086W YIL077CP40508 320 aa1.27□□□□□ -2.21
PRP16YKR086W NOP9P47077 666 aaKnown RBP1.27□□□□□ -2.21
Retrieved 100 of 5,963 RNA–protein pairs in 26.9 ms