RNA–Protein interactions for RNA: YKR059W

TIF1, Transcript of Translation initiation factor eIF4A, yeast

Gene TIF1, Length 1,188 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TIF1	YKR059W	MDM38	Q08179	573 aa		7.13	□□□□□ -1.27
TIF1	YKR059W	TAH18	Q12181	623 aa		7.13	□□□□□ -1.27
TIF1	YKR059W	YDR524C-B	Q3E6R4	66 aa		7.13	□□□□□ -1.27
TIF1	YKR059W	SNA3	P14359	133 aa		7.12	□□□□□ -1.27
TIF1	YKR059W	SMY2	P32909	740 aa	Known RBP	7.12	□□□□□ -1.27
TIF1	YKR059W	TFC3	P34111	1160 aa		7.12	□□□□□ -1.27
TIF1	YKR059W	SAW1	P39735	261 aa		7.12	□□□□□ -1.27
TIF1	YKR059W	JHD1	P40034	492 aa		7.12	□□□□□ -1.27
TIF1	YKR059W	QRI7	P43122	407 aa		7.12	□□□□□ -1.27
TIF1	YKR059W	CUZ1	P53899	274 aa		7.12	□□□□□ -1.27
TIF1	YKR059W	DAK1	P54838	584 aa	Known RBP	7.12	□□□□□ -1.27
TIF1	YKR059W	NAM8	Q00539	523 aa	Known RBP	7.12	□□□□□ -1.27
TIF1	YKR059W	TY1B-A	O13527	1196 aa	Known RBP	7.11	□□□□□ -1.27
TIF1	YKR059W	ERS1	P17261	260 aa		7.11	□□□□□ -1.27
TIF1	YKR059W	OPI1	P21957	404 aa		7.11	□□□□□ -1.27
TIF1	YKR059W	RPC82	P32349	654 aa		7.11	□□□□□ -1.27
TIF1	YKR059W	MCM10	P32354	571 aa		7.11	□□□□□ -1.27
TIF1	YKR059W	DBP7	P36120	742 aa	Known RBP	7.11	□□□□□ -1.27
TIF1	YKR059W	ECM21	P38167	1117 aa	Known RBP	7.11	□□□□□ -1.27
TIF1	YKR059W	CEM1	P39525	442 aa		7.11	□□□□□ -1.27
TIF1	YKR059W	YJL045W	P47052	634 aa		7.11	□□□□□ -1.27
TIF1	YKR059W	LYS5	P50113	272 aa		7.11	□□□□□ -1.27
TIF1	YKR059W	UBC9	P50623	157 aa	Predicted RBP	7.11	□□□□□ -1.27
TIF1	YKR059W	MCM6	P53091	1017 aa	Known RBP	7.11	□□□□□ -1.27
TIF1	YKR059W	DSE4	P53753	1117 aa		7.11	□□□□□ -1.27
TIF1	YKR059W	CLF1	Q12309	687 aa	Predicted RBP	7.11	□□□□□ -1.27
TIF1	YKR059W	YOL114C	Q12322	202 aa		7.11	□□□□□ -1.27
TIF1	YKR059W	TRM11	Q12463	433 aa		7.11	□□□□□ -1.27
TIF1	YKR059W	KCS1	Q12494	1050 aa		7.11	□□□□□ -1.27
TIF1	YKR059W	PDR18	P53756	1333 aa		7.1	□□□□□ -1.27
TIF1	YKR059W	MSS18	P08593	268 aa		7.1	□□□□□ -1.27
TIF1	YKR059W	FUN30	P31380	1131 aa		7.1	□□□□□ -1.27
TIF1	YKR059W	YKL151C	P36059	337 aa		7.1	□□□□□ -1.27
TIF1	YKR059W	MCR1	P36060	302 aa	Known RBP	7.1	□□□□□ -1.27
TIF1	YKR059W	CCZ1	P38273	704 aa		7.1	□□□□□ -1.27
TIF1	YKR059W	VPS8	P39702	1274 aa		7.1	□□□□□ -1.27
TIF1	YKR059W	YMR147W	P40218	223 aa	Known RBP	7.1	□□□□□ -1.27
TIF1	YKR059W	RAD26	P40352	1085 aa		7.1	□□□□□ -1.27
TIF1	YKR059W	SBE2	P42223	864 aa	Known RBP	7.1	□□□□□ -1.27
TIF1	YKR059W	ECM38	Q05902	660 aa	Predicted RBP	7.1	□□□□□ -1.27
TIF1	YKR059W	MRD1	Q06106	887 aa	Known RBP	7.1	□□□□□ -1.27
TIF1	YKR059W	ERP3	Q12403	225 aa		7.1	□□□□□ -1.27
TIF1	YKR059W	APM4	Q99186	491 aa		7.1	□□□□□ -1.27
TIF1	YKR059W	YOL087C	Q99247	1116 aa		7.1	□□□□□ -1.27
TIF1	YKR059W	TOR1	P35169	2470 aa		7.1	□□□□□ -1.27
TIF1	YKR059W	FOB1	O13329	566 aa		7.09	□□□□□ -1.27
TIF1	YKR059W	POL3	P15436	1097 aa		7.09	□□□□□ -1.27
TIF1	YKR059W	COQ1	P18900	473 aa		7.09	□□□□□ -1.27
TIF1	YKR059W	SAM2	P19358	384 aa	Known RBP	7.09	□□□□□ -1.27
TIF1	YKR059W	TKL1	P23254	680 aa	Known RBP	7.09	□□□□□ -1.27
TIF1	YKR059W	POT1	P27796	417 aa	Known RBP RIP-Chip data	7.09	□□□□□ -1.27	not detected
TIF1	YKR059W	PET309	P32522	965 aa	Predicted RBP	7.09	□□□□□ -1.27
TIF1	YKR059W	YSC84	P32793	468 aa		7.09	□□□□□ -1.27
TIF1	YKR059W	SDS22	P36047	338 aa		7.09	□□□□□ -1.27
TIF1	YKR059W	PSY4	P38193	441 aa		7.09	□□□□□ -1.27
TIF1	YKR059W	SET5	P38890	526 aa	Known RBP	7.09	□□□□□ -1.27
TIF1	YKR059W	SLN1	P39928	1220 aa	Predicted RBP	7.09	□□□□□ -1.27
TIF1	YKR059W	NDE1	P40215	560 aa		7.09	□□□□□ -1.27
TIF1	YKR059W	HOS4	P40480	1083 aa		7.09	□□□□□ -1.27
TIF1	YKR059W	ASK10	P48361	1146 aa		7.09	□□□□□ -1.27
TIF1	YKR059W	GTR1	Q00582	310 aa		7.09	□□□□□ -1.27
TIF1	YKR059W	CRR1	Q05790	422 aa		7.09	□□□□□ -1.27
TIF1	YKR059W	HFI1	Q12060	488 aa		7.09	□□□□□ -1.27
TIF1	YKR059W	BI4	P03879	638 aa		7.08	□□□□□ -1.28
TIF1	YKR059W	SAM1	P10659	382 aa	Known RBP	7.08	□□□□□ -1.28
TIF1	YKR059W	SEC65	P29478	273 aa		7.08	□□□□□ -1.28
TIF1	YKR059W	CYS3	P31373	394 aa	Known RBP	7.08	□□□□□ -1.28
TIF1	YKR059W	MYO3	P36006	1272 aa		7.08	□□□□□ -1.28
TIF1	YKR059W	TEP1	P53916	434 aa		7.08	□□□□□ -1.28
TIF1	YKR059W	SLD5	Q03406	294 aa		7.08	□□□□□ -1.28
TIF1	YKR059W	TPP1	Q03796	238 aa		7.08	□□□□□ -1.28
TIF1	YKR059W	GIS4	Q04233	774 aa		7.08	□□□□□ -1.28
TIF1	YKR059W	YMR321C	Q04898	105 aa		7.08	□□□□□ -1.28
TIF1	YKR059W	OSW2	Q12202	724 aa		7.08	□□□□□ -1.28
TIF1	YKR059W	TY1A-BL	Q12266	440 aa		7.08	□□□□□ -1.28
TIF1	YKR059W	UBR2	Q07963	1872 aa		7.07	□□□□□ -1.28
TIF1	YKR059W	TY4B-P	A0A0B7P3V8	1104 aa		7.07	□□□□□ -1.28
TIF1	YKR059W	PRC1	P00729	532 aa		7.07	□□□□□ -1.28
TIF1	YKR059W	CDC31	P06704	161 aa	Known RBP	7.07	□□□□□ -1.28
TIF1	YKR059W	URA1	P28272	314 aa	Predicted RBP	7.07	□□□□□ -1.28
TIF1	YKR059W	NGG1	P32494	702 aa		7.07	□□□□□ -1.28
TIF1	YKR059W	BEM3	P32873	1128 aa		7.07	□□□□□ -1.28
TIF1	YKR059W	OAF3	P36023	863 aa		7.07	□□□□□ -1.28
TIF1	YKR059W	ALG14	P38242	237 aa		7.07	□□□□□ -1.28
TIF1	YKR059W	HXT6	P39003	570 aa	Known RBP	7.07	□□□□□ -1.28
TIF1	YKR059W	HXT7	P39004	570 aa		7.07	□□□□□ -1.28
TIF1	YKR059W	FAF1	P40546	346 aa	Predicted RBP	7.07	□□□□□ -1.28
TIF1	YKR059W	YKE2	P52553	114 aa		7.07	□□□□□ -1.28
TIF1	YKR059W	PUS2	P53167	370 aa		7.07	□□□□□ -1.28
TIF1	YKR059W	RPS15	Q01855	142 aa	Known RBP	7.07	□□□□□ -1.28
TIF1	YKR059W	RSB1	Q08417	382 aa		7.07	□□□□□ -1.28
TIF1	YKR059W	DAP1	Q12091	152 aa		7.07	□□□□□ -1.28
TIF1	YKR059W	TY4A-H	Q6Q5P6	413 aa		7.07	□□□□□ -1.28
TIF1	YKR059W	CDC16	P09798	840 aa		7.06	□□□□□ -1.28
TIF1	YKR059W	RPS21A	P0C0V8	87 aa	Known RBP	7.06	□□□□□ -1.28
TIF1	YKR059W	HOP1	P20050	605 aa		7.06	□□□□□ -1.28
TIF1	YKR059W	SEG2	P34250	1132 aa		7.06	□□□□□ -1.28
TIF1	YKR059W	GIC1	P38785	314 aa		7.06	□□□□□ -1.28
TIF1	YKR059W	NMD3	P38861	518 aa	Known RBP	7.06	□□□□□ -1.28
TIF1	YKR059W	ACO2	P39533	789 aa		7.06	□□□□□ -1.28

Retrieved 100 of 5,963 RNA–protein pairs in 21.8 ms