RNA–Protein interactions for RNA: YJL192C

SOP4, Transcript of ER-membrane protein, yeast

Gene SOP4, Length 705 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SOP4	YJL192C	PGI1	P12709	554 aa	Known RBP	4.16	□□□□□ -1.74
SOP4	YJL192C	CDC10	P25342	322 aa	Known RBP	4.16	□□□□□ -1.74
SOP4	YJL192C	YCL002C	P25565	263 aa		4.16	□□□□□ -1.74
SOP4	YJL192C	CNS1	P33313	385 aa		4.16	□□□□□ -1.74
SOP4	YJL192C	CTF13	P35203	478 aa		4.16	□□□□□ -1.74
SOP4	YJL192C	BET3	P36149	193 aa		4.16	□□□□□ -1.74
SOP4	YJL192C	PCH2	P38126	564 aa		4.16	□□□□□ -1.74
SOP4	YJL192C	PSY4	P38193	441 aa		4.16	□□□□□ -1.74
SOP4	YJL192C	SPT8	P38915	602 aa		4.16	□□□□□ -1.74
SOP4	YJL192C	SAP1	P39955	897 aa	Known RBP	4.16	□□□□□ -1.74
SOP4	YJL192C	HOS4	P40480	1083 aa		4.16	□□□□□ -1.74
SOP4	YJL192C	UBP6	P43593	499 aa	Known RBP	4.16	□□□□□ -1.74
SOP4	YJL192C	APT1	P49435	187 aa	Known RBP	4.16	□□□□□ -1.74
SOP4	YJL192C	UBA2	P52488	636 aa		4.16	□□□□□ -1.74
SOP4	YJL192C	CAF130	P53280	1122 aa	Predicted RBP	4.16	□□□□□ -1.74
SOP4	YJL192C	DUS1	P53759	423 aa	Known RBP	4.16	□□□□□ -1.74
SOP4	YJL192C	DOS2	P54858	310 aa		4.16	□□□□□ -1.74
SOP4	YJL192C	YML119W	Q03208	357 aa		4.16	□□□□□ -1.74
SOP4	YJL192C	LRS4	Q04087	347 aa	Known RBP	4.16	□□□□□ -1.74
SOP4	YJL192C	YDR338C	Q05497	695 aa		4.16	□□□□□ -1.74
SOP4	YJL192C	YOL057W	Q08225	711 aa		4.16	□□□□□ -1.74
SOP4	YJL192C	APL4	Q12028	832 aa		4.16	□□□□□ -1.74
SOP4	YJL192C	NUR1	Q12066	484 aa		4.16	□□□□□ -1.74
SOP4	YJL192C	BNI1	P41832	1953 aa		4.16	□□□□□ -1.74
SOP4	YJL192C	PDR18	P53756	1333 aa		4.16	□□□□□ -1.74
SOP4	YJL192C	TOM70	P07213	617 aa	Known RBP	4.15	□□□□□ -1.75
SOP4	YJL192C	ALG7	P07286	448 aa		4.15	□□□□□ -1.75
SOP4	YJL192C	DAL7	P21826	554 aa		4.15	□□□□□ -1.75
SOP4	YJL192C	ECM32	P32644	1121 aa	Known RBP	4.15	□□□□□ -1.75
SOP4	YJL192C	YKL091C	P33324	310 aa	Known RBP	4.15	□□□□□ -1.75
SOP4	YJL192C	OLA1	P38219	394 aa	Known RBP	4.15	□□□□□ -1.75
SOP4	YJL192C	CAJ1	P39101	391 aa		4.15	□□□□□ -1.75
SOP4	YJL192C	VHR1	P40522	640 aa		4.15	□□□□□ -1.75
SOP4	YJL192C	FKH2	P41813	862 aa		4.15	□□□□□ -1.75
SOP4	YJL192C	YJL049W	P47048	450 aa		4.15	□□□□□ -1.75
SOP4	YJL192C	ILM1	P47155	203 aa		4.15	□□□□□ -1.75
SOP4	YJL192C	STB4	P50104	949 aa		4.15	□□□□□ -1.75
SOP4	YJL192C	TAD1	P53065	400 aa		4.15	□□□□□ -1.75
SOP4	YJL192C	HUL5	P53119	910 aa		4.15	□□□□□ -1.75
SOP4	YJL192C	RRB1	Q04225	511 aa	Known RBP	4.15	□□□□□ -1.75
SOP4	YJL192C	UBX2	Q04228	584 aa		4.15	□□□□□ -1.75
SOP4	YJL192C	NSE3	Q05541	303 aa		4.15	□□□□□ -1.75
SOP4	YJL192C	SFH1	Q06168	426 aa		4.15	□□□□□ -1.75
SOP4	YJL192C	BDF2	Q07442	638 aa		4.15	□□□□□ -1.75
SOP4	YJL192C	YDL124W	Q07551	312 aa	Known RBP	4.15	□□□□□ -1.75
SOP4	YJL192C	CMS1	Q07897	291 aa	Known RBP	4.15	□□□□□ -1.75
SOP4	YJL192C	SMC6	Q12749	1114 aa		4.15	□□□□□ -1.75
SOP4	YJL192C	PPR1	P07272	904 aa	Predicted RBP	4.14	□□□□□ -1.75
SOP4	YJL192C	MRP7	P12687	371 aa		4.14	□□□□□ -1.75
SOP4	YJL192C	GAL11	P19659	1081 aa		4.14	□□□□□ -1.75
SOP4	YJL192C	CYS3	P31373	394 aa	Known RBP	4.14	□□□□□ -1.75
SOP4	YJL192C	DPH5	P32469	300 aa	Predicted RBP	4.14	□□□□□ -1.75
SOP4	YJL192C	PDB1	P32473	366 aa	Known RBP	4.14	□□□□□ -1.75
SOP4	YJL192C	RAD5	P32849	1169 aa	Predicted RBP	4.14	□□□□□ -1.75
SOP4	YJL192C	STO1	P34160	861 aa	Known RBP	4.14	□□□□□ -1.75
SOP4	YJL192C	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	4.14	□□□□□ -1.75	not detected
SOP4	YJL192C	EFM2	P38347	419 aa		4.14	□□□□□ -1.75
SOP4	YJL192C	TDA3	P38758	523 aa		4.14	□□□□□ -1.75
SOP4	YJL192C	RPP1	P38786	293 aa		4.14	□□□□□ -1.75
SOP4	YJL192C	MRX1	P40050	688 aa		4.14	□□□□□ -1.75
SOP4	YJL192C	TRS85	P46944	698 aa		4.14	□□□□□ -1.75
SOP4	YJL192C	RTA1	P53047	317 aa		4.14	□□□□□ -1.75
SOP4	YJL192C	MLC1	P53141	149 aa		4.14	□□□□□ -1.75
SOP4	YJL192C	SEC5	P89102	971 aa		4.14	□□□□□ -1.75
SOP4	YJL192C	VPS38	Q05919	439 aa		4.14	□□□□□ -1.75
SOP4	YJL192C	MCH5	Q08777	521 aa		4.14	□□□□□ -1.75
SOP4	YJL192C	FLC1	Q08967	793 aa		4.14	□□□□□ -1.75
SOP4	YJL192C	RUD3	Q12234	484 aa	Known RBP	4.14	□□□□□ -1.75
SOP4	YJL192C	TRM11	Q12463	433 aa		4.14	□□□□□ -1.75
SOP4	YJL192C	PRC1	P00729	532 aa		4.13	□□□□□ -1.75
SOP4	YJL192C	TOP1	P04786	769 aa		4.13	□□□□□ -1.75
SOP4	YJL192C	KRS1	P15180	591 aa	Known RBP	4.13	□□□□□ -1.75
SOP4	YJL192C	CDC15	P27636	974 aa		4.13	□□□□□ -1.75
SOP4	YJL192C	NIP1	P32497	812 aa	Known RBP	4.13	□□□□□ -1.75
SOP4	YJL192C	YME2	P32843	850 aa		4.13	□□□□□ -1.75
SOP4	YJL192C	EMC3	P36039	253 aa		4.13	□□□□□ -1.75
SOP4	YJL192C	HEL1	P36113	551 aa		4.13	□□□□□ -1.75
SOP4	YJL192C	LIN1	P38852	340 aa	Predicted RBP	4.13	□□□□□ -1.75
SOP4	YJL192C	ELO3	P40319	345 aa		4.13	□□□□□ -1.75
SOP4	YJL192C	EFM4	P40516	257 aa		4.13	□□□□□ -1.75
SOP4	YJL192C	MIC19	P43594	170 aa		4.13	□□□□□ -1.75
SOP4	YJL192C	NIT3	P49954	291 aa		4.13	□□□□□ -1.75
SOP4	YJL192C	CUE3	P53137	624 aa	Known RBP	4.13	□□□□□ -1.75
SOP4	YJL192C	ASI2	P53895	289 aa		4.13	□□□□□ -1.75
SOP4	YJL192C	DNM1	P54861	757 aa		4.13	□□□□□ -1.75
SOP4	YJL192C	TMN2	Q04562	672 aa		4.13	□□□□□ -1.75
SOP4	YJL192C	VAC14	Q06708	880 aa		4.13	□□□□□ -1.75
SOP4	YJL192C	FRE5	Q08908	694 aa		4.13	□□□□□ -1.75
SOP4	YJL192C	CTI6	Q08923	506 aa		4.13	□□□□□ -1.75
SOP4	YJL192C	MET3	P08536	511 aa		4.12	□□□□□ -1.75
SOP4	YJL192C	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.12	□□□□□ -1.75	not detected
SOP4	YJL192C	CBP3	P21560	335 aa		4.12	□□□□□ -1.75
SOP4	YJL192C	PSO2	P30620	661 aa		4.12	□□□□□ -1.75
SOP4	YJL192C	PPS1	P38148	807 aa		4.12	□□□□□ -1.75
SOP4	YJL192C	OSH3	P38713	996 aa	Known RBP	4.12	□□□□□ -1.75
SOP4	YJL192C	SAK1	P38990	1142 aa		4.12	□□□□□ -1.75
SOP4	YJL192C	SEC9	P40357	651 aa		4.12	□□□□□ -1.75
SOP4	YJL192C	MUP1	P50276	574 aa		4.12	□□□□□ -1.75
SOP4	YJL192C	NOG2	P53742	486 aa	Known RBP	4.12	□□□□□ -1.75
SOP4	YJL192C	TIM44	Q01852	431 aa		4.12	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 31.5 ms