RNA–Protein interactions for RNA: YIR009W

MSL1, Transcript of U2B component of U2 snRNP, yeastyeast

Gene MSL1, Length 336 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSL1YIR009W YKU70P32807 602 aa2.86□□□□□ -1.95
MSL1YIR009W MAL31P38156 614 aa2.86□□□□□ -1.95
MSL1YIR009W ATG36P46983 293 aa2.86□□□□□ -1.95
MSL1YIR009W MET13P53128 600 aa2.86□□□□□ -1.95
MSL1YIR009W UTP14Q04500 899 aaKnown RBP2.86□□□□□ -1.95
MSL1YIR009W VBA4Q04602 768 aaKnown RBP2.86□□□□□ -1.95
MSL1YIR009W AAD3P25612 363 aa2.85□□□□□ -1.95
MSL1YIR009W YKR075CP36155 307 aa2.85□□□□□ -1.95
MSL1YIR009W PIP2P52960 996 aa2.85□□□□□ -1.95
MSL1YIR009W CPR8P53728 308 aa2.85□□□□□ -1.95
MSL1YIR009W DAK1P54838 584 aaKnown RBP2.85□□□□□ -1.95
MSL1YIR009W YLR407WQ06070 228 aa2.85□□□□□ -1.95
MSL1YIR009W YPS7Q06325 596 aa2.85□□□□□ -1.95
MSL1YIR009W GUD1Q07729 489 aa2.85□□□□□ -1.95
MSL1YIR009W AI5_ALPHAQ9ZZX1 630 aa2.85□□□□□ -1.95
MSL1YIR009W PRP22P24384 1145 aaKnown RBP2.84□□□□□ -1.95
MSL1YIR009W BUD8P41698 603 aa2.84□□□□□ -1.95
MSL1YIR009W HLJ1P48353 224 aa2.84□□□□□ -1.95
MSL1YIR009W YNL193WP53870 558 aa2.84□□□□□ -1.95
MSL1YIR009W YMR210WQ03649 449 aa2.84□□□□□ -1.95
MSL1YIR009W NOP14Q99207 810 aaKnown RBP2.84□□□□□ -1.95
MSL1YIR009W SPA2P23201 1466 aaKnown RBP2.84□□□□□ -1.96
MSL1YIR009W PMA2P19657 947 aa2.83□□□□□ -1.96
MSL1YIR009W GRX7P38068 203 aa2.83□□□□□ -1.96
MSL1YIR009W UBP12P39538 1254 aa2.83□□□□□ -1.96
MSL1YIR009W ULP2P40537 1034 aaPredicted RBP2.83□□□□□ -1.96
MSL1YIR009W PXA1P41909 870 aa2.83□□□□□ -1.96
MSL1YIR009W MPS1P54199 764 aa2.83□□□□□ -1.96
MSL1YIR009W TFB2Q02939 513 aa2.83□□□□□ -1.96
MSL1YIR009W TRS23Q03784 219 aa2.83□□□□□ -1.96
MSL1YIR009W YOL057WQ08225 711 aa2.83□□□□□ -1.96
MSL1YIR009W CIR2Q08822 631 aa2.83□□□□□ -1.96
MSL1YIR009W TOP1P04786 769 aa2.82□□□□□ -1.96
MSL1YIR009W SWI6P09959 803 aa2.82□□□□□ -1.96
MSL1YIR009W RPL8AP17076 256 aaKnown RBP2.82□□□□□ -1.96
MSL1YIR009W TMN3P40071 706 aa2.82□□□□□ -1.96
MSL1YIR009W MGS1P40151 587 aa2.82□□□□□ -1.96
MSL1YIR009W SCS3P53012 380 aa2.82□□□□□ -1.96
MSL1YIR009W SPO1P53541 631 aa2.82□□□□□ -1.96
MSL1YIR009W YNR029CP53729 429 aaKnown RBP2.82□□□□□ -1.96
MSL1YIR009W FOL1P53848 824 aa2.82□□□□□ -1.96
MSL1YIR009W STP1Q00947 519 aa2.82□□□□□ -1.96
MSL1YIR009W FDC1Q03034 503 aa2.82□□□□□ -1.96
MSL1YIR009W STP4Q07351 490 aa2.82□□□□□ -1.96
MSL1YIR009W YUR1P26725 428 aa2.81□□□□□ -1.96
MSL1YIR009W MRPL7P36519 292 aa2.81□□□□□ -1.96
MSL1YIR009W THI6P41835 540 aa2.81□□□□□ -1.96
MSL1YIR009W RET2P43621 546 aa2.81□□□□□ -1.96
MSL1YIR009W BPL1P48445 690 aaPredicted RBP2.81□□□□□ -1.96
MSL1YIR009W YIP4P53093 235 aa2.81□□□□□ -1.96
MSL1YIR009W YGL081WP53156 320 aa2.81□□□□□ -1.96
MSL1YIR009W FRE7Q12333 620 aa2.81□□□□□ -1.96
MSL1YIR009W ZPS1Q12512 249 aa2.81□□□□□ -1.96
MSL1YIR009W NUP145P49687 1317 aa2.81□□□□□ -1.96
MSL1YIR009W RPS17AP02407 136 aaKnown RBP2.8□□□□□ -1.96
MSL1YIR009W CPA2P03965 1118 aaKnown RBP2.8□□□□□ -1.96
MSL1YIR009W RPL7AP05737 244 aaKnown RBP2.8□□□□□ -1.96
MSL1YIR009W RPS17BP14127 136 aaKnown RBP2.8□□□□□ -1.96
MSL1YIR009W PRE4P30657 266 aa2.8□□□□□ -1.96
MSL1YIR009W RIM4P38741 713 aa2.8□□□□□ -1.96
MSL1YIR009W PIH1P38768 344 aa2.8□□□□□ -1.96
MSL1YIR009W PPE1P38796 400 aa2.8□□□□□ -1.96
MSL1YIR009W CRG1P38892 291 aaRIP-Chip data2.8□□□□□ -1.96not detected
MSL1YIR009W PSA1P41940 361 aaKnown RBP2.8□□□□□ -1.96
MSL1YIR009W BFA1P47113 574 aa2.8□□□□□ -1.96
MSL1YIR009W YGR237CP50089 785 aa2.8□□□□□ -1.96
MSL1YIR009W NOP15P53927 220 aaPredicted RBP2.8□□□□□ -1.96
MSL1YIR009W EFR3Q03653 782 aaKnown RBP2.8□□□□□ -1.96
MSL1YIR009W PPN1Q04119 674 aa2.8□□□□□ -1.96
MSL1YIR009W GEP3Q08622 556 aa2.8□□□□□ -1.96
MSL1YIR009W RPL7BQ12213 244 aaKnown RBP2.8□□□□□ -1.96
MSL1YIR009W TUP1P16649 713 aa2.79□□□□□ -1.96
MSL1YIR009W CNE1P27825 502 aa2.79□□□□□ -1.96
MSL1YIR009W ECM32P32644 1121 aaKnown RBP2.79□□□□□ -1.96
MSL1YIR009W CDS1P38221 457 aa2.79□□□□□ -1.96
MSL1YIR009W TDA3P38758 523 aa2.79□□□□□ -1.96
MSL1YIR009W FTR1P40088 404 aa2.79□□□□□ -1.96
MSL1YIR009W IES1P43579 692 aa2.79□□□□□ -1.96
MSL1YIR009W YJR120WP47157 116 aa2.79□□□□□ -1.96
MSL1YIR009W YGR054WP53235 642 aaKnown RBP2.79□□□□□ -1.96
MSL1YIR009W YNL018CP53976 612 aa2.79□□□□□ -1.96
MSL1YIR009W YPL068CQ02749 293 aa2.79□□□□□ -1.96
MSL1YIR009W TIM50Q02776 476 aa2.79□□□□□ -1.96
MSL1YIR009W CEF1Q03654 590 aaPredicted RBP2.79□□□□□ -1.96
MSL1YIR009W HLR1Q04429 423 aa2.79□□□□□ -1.96
MSL1YIR009W ORM2Q06144 216 aa2.79□□□□□ -1.96
MSL1YIR009W IRC3Q06683 689 aa2.79□□□□□ -1.96
MSL1YIR009W HEM1P09950 548 aaPredicted RBP2.78□□□□□ -1.96
MSL1YIR009W AQY1P0CD91 305 aa2.78□□□□□ -1.96
MSL1YIR009W SSD1P24276 1250 aaKnown RBP RIP-Chip data2.78□□□□□ -1.96not detected
MSL1YIR009W BEM3P32873 1128 aa2.78□□□□□ -1.96
MSL1YIR009W CKB2P38930 258 aa2.78□□□□□ -1.96
MSL1YIR009W TPM2P40414 161 aa2.78□□□□□ -1.96
MSL1YIR009W YJR096WP47137 282 aa2.78□□□□□ -1.96
MSL1YIR009W TAF4P50105 388 aa2.78□□□□□ -1.96
MSL1YIR009W SDA1P53313 767 aaKnown RBP2.78□□□□□ -1.96
MSL1YIR009W COQ6P53318 479 aa2.78□□□□□ -1.96
MSL1YIR009W ATP23P53722 227 aa2.78□□□□□ -1.96
MSL1YIR009W RPS15Q01855 142 aaKnown RBP2.78□□□□□ -1.96
MSL1YIR009W MFM1Q02783 413 aa2.78□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 50.3 ms