RNA–Protein interactions for RNA: YIR001C

SGN1, Transcript of Cytoplasmic RNA-binding protein, yeastyeast

Gene SGN1, Length 753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGN1YIR001C TAF10Q12030 206 aa4.05□□□□□ -1.76
SGN1YIR001C SPE3Q12074 293 aaKnown RBP4.05□□□□□ -1.76
SGN1YIR001C CTF3Q12748 733 aa4.05□□□□□ -1.76
SGN1YIR001C APM4Q99186 491 aa4.05□□□□□ -1.76
SGN1YIR001C MPD2Q99316 277 aa4.05□□□□□ -1.76
SGN1YIR001C FRT1Q99332 602 aa4.05□□□□□ -1.76
SGN1YIR001C IRA2P19158 3079 aa4.04□□□□□ -1.76
SGN1YIR001C YEL076C-AP0CX16 216 aa4.04□□□□□ -1.76
SGN1YIR001C YLR464WP0CX17 216 aa4.04□□□□□ -1.76
SGN1YIR001C SIR1P21691 654 aa4.04□□□□□ -1.76
SGN1YIR001C YSC83P32792 385 aa4.04□□□□□ -1.76
SGN1YIR001C MNN4P36044 1178 aa4.04□□□□□ -1.76
SGN1YIR001C KAE1P36132 386 aa4.04□□□□□ -1.76
SGN1YIR001C ARL1P38116 183 aaKnown RBP4.04□□□□□ -1.76
SGN1YIR001C POL12P38121 705 aaPredicted RBP4.04□□□□□ -1.76
SGN1YIR001C YBR284WP38150 797 aa4.04□□□□□ -1.76
SGN1YIR001C SHE3P38272 425 aaKnown RBP4.04□□□□□ -1.76
SGN1YIR001C YHR219WP38900 624 aa4.04□□□□□ -1.76
SGN1YIR001C SHU2P38957 223 aa4.04□□□□□ -1.76
SGN1YIR001C RVS167P39743 482 aaKnown RBP4.04□□□□□ -1.76
SGN1YIR001C YEL076CP39971 216 aa4.04□□□□□ -1.76
SGN1YIR001C YGR153WP48238 217 aa4.04□□□□□ -1.76
SGN1YIR001C UBA2P52488 636 aa4.04□□□□□ -1.76
SGN1YIR001C PIL1P53252 339 aaKnown RBP4.04□□□□□ -1.76
SGN1YIR001C YOR223WQ12015 292 aa4.04□□□□□ -1.76
SGN1YIR001C SGT2Q12118 346 aaKnown RBP4.04□□□□□ -1.76
SGN1YIR001C DCS2Q12123 353 aa4.04□□□□□ -1.76
SGN1YIR001C HRT3Q12347 344 aa4.04□□□□□ -1.76
SGN1YIR001C CMR1Q12510 522 aaKnown RBP4.04□□□□□ -1.76
SGN1YIR001C HTS1P07263 546 aaKnown RBP4.03□□□□□ -1.76
SGN1YIR001C ASP3-2P0CX77 362 aa4.03□□□□□ -1.76
SGN1YIR001C ASP3-3P0CX78 362 aa4.03□□□□□ -1.76
SGN1YIR001C ASP3-4P0CX79 362 aa4.03□□□□□ -1.76
SGN1YIR001C ASP3-1P0CZ17 362 aa4.03□□□□□ -1.76
SGN1YIR001C CHS2P14180 963 aa4.03□□□□□ -1.76
SGN1YIR001C STE11P23561 717 aa4.03□□□□□ -1.76
SGN1YIR001C MCM3P24279 971 aaKnown RBP4.03□□□□□ -1.76
SGN1YIR001C KIP1P28742 1111 aa4.03□□□□□ -1.76
SGN1YIR001C TSA1P34760 196 aaKnown RBP4.03□□□□□ -1.76
SGN1YIR001C SFB3P38810 929 aa4.03□□□□□ -1.76
SGN1YIR001C IES1P43579 692 aa4.03□□□□□ -1.76
SGN1YIR001C ASN1P49089 572 aaKnown RBP4.03□□□□□ -1.76
SGN1YIR001C CTF18P49956 741 aa4.03□□□□□ -1.76
SGN1YIR001C CUE3P53137 624 aaKnown RBP4.03□□□□□ -1.76
SGN1YIR001C UTP8P53276 713 aaKnown RBP4.03□□□□□ -1.76
SGN1YIR001C NCE103P53615 221 aa4.03□□□□□ -1.76
SGN1YIR001C CWC24P53769 259 aa4.03□□□□□ -1.76
SGN1YIR001C NOP13P53883 403 aaKnown RBP RIP-Chip data4.03□□□□□ -1.76not detected
SGN1YIR001C SEC5P89102 971 aa4.03□□□□□ -1.76
SGN1YIR001C SNU56Q03782 492 aaKnown RBP4.03□□□□□ -1.76
SGN1YIR001C YCS4Q06156 1176 aa4.03□□□□□ -1.76
SGN1YIR001C CUR1Q06469 252 aa4.03□□□□□ -1.76
SGN1YIR001C CDD1Q06549 142 aa4.03□□□□□ -1.76
SGN1YIR001C PIN2Q12057 282 aa4.03□□□□□ -1.76
SGN1YIR001C PCK1P10963 549 aa4.02□□□□□ -1.77
SGN1YIR001C MTF1P14908 341 aaKnown RBP4.02□□□□□ -1.77
SGN1YIR001C GPI10P30777 616 aa4.02□□□□□ -1.77
SGN1YIR001C PEP7P32609 515 aa4.02□□□□□ -1.77
SGN1YIR001C SLA2P33338 968 aa4.02□□□□□ -1.77
SGN1YIR001C SLD2P34252 453 aa4.02□□□□□ -1.77
SGN1YIR001C PPS1P38148 807 aa4.02□□□□□ -1.77
SGN1YIR001C RFC5P38251 354 aa4.02□□□□□ -1.77
SGN1YIR001C YHR054CP38780 354 aa4.02□□□□□ -1.77
SGN1YIR001C SHQ1P40486 507 aaPredicted RBP4.02□□□□□ -1.77
SGN1YIR001C CHS6P40955 746 aa4.02□□□□□ -1.77
SGN1YIR001C HSH155P49955 971 aaKnown RBP4.02□□□□□ -1.77
SGN1YIR001C HER2Q03557 464 aa4.02□□□□□ -1.77
SGN1YIR001C YPQ1Q12010 308 aa4.02□□□□□ -1.77
SGN1YIR001C PTC5Q12511 572 aa4.02□□□□□ -1.77
SGN1YIR001C FOB1O13329 566 aa4.01□□□□□ -1.77
SGN1YIR001C RNR2P09938 399 aaKnown RBP4.01□□□□□ -1.77
SGN1YIR001C PHO8P11491 566 aa4.01□□□□□ -1.77
SGN1YIR001C MSB1P21339 1137 aaKnown RBP4.01□□□□□ -1.77
SGN1YIR001C ISY1P21374 235 aaPredicted RBP4.01□□□□□ -1.77
SGN1YIR001C RAD16P31244 790 aa4.01□□□□□ -1.77
SGN1YIR001C PIN4P34217 668 aaKnown RBP RIP-Chip data4.01□□□□□ -1.77not detected
SGN1YIR001C YBR056WP38081 501 aa4.01□□□□□ -1.77
SGN1YIR001C SIF2P38262 535 aa4.01□□□□□ -1.77
SGN1YIR001C FAA3P39002 694 aa4.01□□□□□ -1.77
SGN1YIR001C GIP4P39732 760 aa4.01□□□□□ -1.77
SGN1YIR001C THI6P41835 540 aa4.01□□□□□ -1.77
SGN1YIR001C NPA3P47122 385 aa4.01□□□□□ -1.77
SGN1YIR001C NMA2P53204 395 aa4.01□□□□□ -1.77
SGN1YIR001C GCN5Q03330 439 aa4.01□□□□□ -1.77
SGN1YIR001C WAR1Q03631 944 aa4.01□□□□□ -1.77
SGN1YIR001C TMN2Q04562 672 aa4.01□□□□□ -1.77
SGN1YIR001C PRM6Q04705 352 aa4.01□□□□□ -1.77
SGN1YIR001C GIC2Q06648 383 aa4.01□□□□□ -1.77
SGN1YIR001C PUF3Q07807 879 aaKnown RBP RIP-Chip data4.01□□□□□ -1.77not detected
SGN1YIR001C MED7Q08278 222 aa4.01□□□□□ -1.77
SGN1YIR001C YPL277CQ08989 487 aa4.01□□□□□ -1.77
SGN1YIR001C GPM2Q12008 311 aa4.01□□□□□ -1.77
SGN1YIR001C YLR122CQ12312 125 aa4.01□□□□□ -1.77
SGN1YIR001C NDJ1Q12366 352 aa4.01□□□□□ -1.77
SGN1YIR001C NUM1Q00402 2748 aa4.01□□□□□ -1.77
SGN1YIR001C HIS4P00815 799 aaKnown RBP4□□□□□ -1.77
SGN1YIR001C PHO4P07270 312 aaKnown RBP4□□□□□ -1.77
SGN1YIR001C RPL19AP0CX82 189 aaKnown RBP4□□□□□ -1.77
SGN1YIR001C RPL19BP0CX83 189 aaPredicted RBP4□□□□□ -1.77
SGN1YIR001C PGI1P12709 554 aaKnown RBP4□□□□□ -1.77
Retrieved 100 of 5,963 RNA–protein pairs in 18.1 ms