RNA–Protein interactions for RNA: YIL076W

SEC28, Transcript of Epsilon-COP subunit of the coatomer, yeastyeast

Gene SEC28, Length 891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC28YIL076W YMC1P32331 307 aa5.28□□□□□ -1.56
SEC28YIL076W UGP1P32861 499 aaKnown RBP5.28□□□□□ -1.56
SEC28YIL076W TMN3P40071 706 aa5.28□□□□□ -1.56
SEC28YIL076W PMT3P47190 753 aa5.28□□□□□ -1.56
SEC28YIL076W TAF4P50105 388 aa5.28□□□□□ -1.56
SEC28YIL076W YNR029CP53729 429 aaKnown RBP5.28□□□□□ -1.56
SEC28YIL076W NGL2Q03264 515 aaKnown RBP5.28□□□□□ -1.56
SEC28YIL076W YGR161W-CQ3E744 92 aa5.28□□□□□ -1.56
SEC28YIL076W TUP1P16649 713 aa5.27□□□□□ -1.57
SEC28YIL076W PRE4P30657 266 aa5.27□□□□□ -1.57
SEC28YIL076W FAT1P38225 669 aa5.27□□□□□ -1.57
SEC28YIL076W OAF1P39720 1047 aaPredicted RBP5.27□□□□□ -1.57
SEC28YIL076W TIM50Q02776 476 aa5.27□□□□□ -1.57
SEC28YIL076W TRS23Q03784 219 aa5.27□□□□□ -1.57
SEC28YIL076W HOF1Q05080 669 aa5.27□□□□□ -1.57
SEC28YIL076W SLK19Q08581 821 aaKnown RBP5.27□□□□□ -1.57
SEC28YIL076W YTM1Q12024 460 aaPredicted RBP5.27□□□□□ -1.57
SEC28YIL076W ULA1Q12059 462 aa5.27□□□□□ -1.57
SEC28YIL076W HFI1Q12060 488 aa5.27□□□□□ -1.57
SEC28YIL076W ADE5,7P07244 802 aaKnown RBP5.26□□□□□ -1.57
SEC28YIL076W RPS21AP0C0V8 87 aaKnown RBP5.26□□□□□ -1.57
SEC28YIL076W CRG1P38892 291 aaRIP-Chip data5.26□□□□□ -1.57not detected
SEC28YIL076W GPG1P53130 126 aa5.26□□□□□ -1.57
SEC28YIL076W FDC1Q03034 503 aa5.26□□□□□ -1.57
SEC28YIL076W STE4P18851 423 aa5.25□□□□□ -1.57
SEC28YIL076W FPR3P38911 411 aaKnown RBP5.25□□□□□ -1.57
SEC28YIL076W FTR1P40088 404 aa5.25□□□□□ -1.57
SEC28YIL076W MNN11P46985 422 aaKnown RBP5.25□□□□□ -1.57
SEC28YIL076W DAK1P54838 584 aaKnown RBP5.25□□□□□ -1.57
SEC28YIL076W PTA1Q01329 785 aaPredicted RBP5.25□□□□□ -1.57
SEC28YIL076W NSE5Q03718 556 aa5.25□□□□□ -1.57
SEC28YIL076W APM4Q99186 491 aa5.25□□□□□ -1.57
SEC28YIL076W ERG11P10614 530 aa5.24□□□□□ -1.57
SEC28YIL076W PPE1P38796 400 aa5.24□□□□□ -1.57
SEC28YIL076W VID28P40547 921 aa5.24□□□□□ -1.57
SEC28YIL076W GPP1P41277 250 aaKnown RBP5.24□□□□□ -1.57
SEC28YIL076W RIM13Q03792 727 aa5.24□□□□□ -1.57
SEC28YIL076W CDC26P14724 124 aa5.23□□□□□ -1.57
SEC28YIL076W MRPL7P36519 292 aa5.23□□□□□ -1.57
SEC28YIL076W CDS1P38221 457 aa5.23□□□□□ -1.57
SEC28YIL076W PRM2P40534 656 aa5.23□□□□□ -1.57
SEC28YIL076W YGR237CP50089 785 aa5.23□□□□□ -1.57
SEC28YIL076W YGR054WP53235 642 aaKnown RBP5.23□□□□□ -1.57
SEC28YIL076W HLR1Q04429 423 aa5.23□□□□□ -1.57
SEC28YIL076W HFD1Q04458 532 aa5.23□□□□□ -1.57
SEC28YIL076W FAP7Q12055 197 aaPredicted RBP5.23□□□□□ -1.57
SEC28YIL076W DID4P36108 232 aa5.22□□□□□ -1.57
SEC28YIL076W YHR033WP38690 423 aa5.22□□□□□ -1.57
SEC28YIL076W SNM1P40993 198 aa5.22□□□□□ -1.57
SEC28YIL076W YIP4P53093 235 aa5.22□□□□□ -1.57
SEC28YIL076W YGL117WP53133 265 aa5.22□□□□□ -1.57
SEC28YIL076W MFM1Q02783 413 aa5.22□□□□□ -1.57
SEC28YIL076W ARG7Q04728 441 aa5.22□□□□□ -1.57
SEC28YIL076W AFT2Q08957 416 aa5.22□□□□□ -1.57
SEC28YIL076W THI6P41835 540 aa5.21□□□□□ -1.58
SEC28YIL076W TAX4P47030 604 aa5.21□□□□□ -1.58
SEC28YIL076W CPR8P53728 308 aa5.21□□□□□ -1.58
SEC28YIL076W EFR3Q03653 782 aaKnown RBP5.21□□□□□ -1.58
SEC28YIL076W SEG1Q04279 960 aa5.21□□□□□ -1.58
SEC28YIL076W ACO1P19414 778 aaKnown RBP RIP-Chip data5.2□□□□□ -1.58not detected
SEC28YIL076W MF(ALPHA)2P32435 120 aa5.2□□□□□ -1.58
SEC28YIL076W MTC7P32633 139 aa5.2□□□□□ -1.58
SEC28YIL076W RIM4P38741 713 aa5.2□□□□□ -1.58
SEC28YIL076W NUP1P20676 1076 aa5.19□□□□□ -1.58
SEC28YIL076W AAD3P25612 363 aa5.19□□□□□ -1.58
SEC28YIL076W EHT1P38295 451 aa5.19□□□□□ -1.58
SEC28YIL076W CEF1Q03654 590 aaPredicted RBP5.19□□□□□ -1.58
SEC28YIL076W YCG1Q06680 1035 aa5.19□□□□□ -1.58
SEC28YIL076W LEU2P04173 364 aaPredicted RBP5.18□□□□□ -1.58
SEC28YIL076W PIH1P38768 344 aa5.18□□□□□ -1.58
SEC28YIL076W AIM41Q12032 185 aa5.18□□□□□ -1.58
SEC28YIL076W ZPS1Q12512 249 aa5.18□□□□□ -1.58
SEC28YIL076W HMG2P12684 1045 aa5.17□□□□□ -1.58
SEC28YIL076W ENP2P48234 707 aaKnown RBP5.17□□□□□ -1.58
SEC28YIL076W YDL183CP48569 320 aa5.17□□□□□ -1.58
SEC28YIL076W BUD17P53727 317 aa5.17□□□□□ -1.58
SEC28YIL076W YPL216WQ08964 1102 aa5.17□□□□□ -1.58
SEC28YIL076W PGK1P00560 416 aaKnown RBP5.16□□□□□ -1.58
SEC28YIL076W CNE1P27825 502 aa5.16□□□□□ -1.58
SEC28YIL076W DAL3P32459 195 aa5.16□□□□□ -1.58
SEC28YIL076W HXT4P32467 576 aa5.16□□□□□ -1.58
SEC28YIL076W SER1P33330 395 aaKnown RBP5.16□□□□□ -1.58
SEC28YIL076W DHR2P36009 735 aaPredicted RBP5.16□□□□□ -1.58
SEC28YIL076W HOT13P36078 116 aa5.16□□□□□ -1.58
SEC28YIL076W YEL025CP39991 1188 aa5.16□□□□□ -1.58
SEC28YIL076W RNR4P49723 345 aaKnown RBP5.16□□□□□ -1.58
SEC28YIL076W PIP2P52960 996 aa5.16□□□□□ -1.58
SEC28YIL076W AI5_ALPHAQ9ZZX1 630 aa5.16□□□□□ -1.58
SEC28YIL076W CPA2P03965 1118 aaKnown RBP5.15□□□□□ -1.59
SEC28YIL076W HOP1P20050 605 aa5.15□□□□□ -1.59
SEC28YIL076W DGR2P32330 852 aa5.15□□□□□ -1.59
SEC28YIL076W RPS15Q01855 142 aaKnown RBP5.15□□□□□ -1.59
SEC28YIL076W YDL073WQ07454 984 aa5.15□□□□□ -1.59
SEC28YIL076W NOP56Q12460 504 aaKnown RBP RIP-Chip data5.15□□□□□ -1.59not detected
SEC28YIL076W PMA2P19657 947 aa5.14□□□□□ -1.59
SEC28YIL076W MBR1P23493 339 aa5.14□□□□□ -1.59
SEC28YIL076W LRO1P40345 661 aa5.14□□□□□ -1.59
SEC28YIL076W XBP1P40489 647 aa5.14□□□□□ -1.59
SEC28YIL076W BNA3P47039 444 aaKnown RBP5.14□□□□□ -1.59
SEC28YIL076W COQ6P53318 479 aa5.14□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 10.4 ms