RNA–Protein interactions for RNA: YHR135C

YCK1, Transcript of Palmitoylated plasma membrane-bound casein kinase I (CK1) isoform, yeastyeast

Gene YCK1, Length 1,617 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YCK1YHR135C HFI1Q12060 488 aa6.47□□□□□ -1.37
YCK1YHR135C BI2P03873 423 aa6.47□□□□□ -1.37
YCK1YHR135C BI4P03879 638 aa6.47□□□□□ -1.37
YCK1YHR135C ARG4P04076 463 aaPredicted RBP6.47□□□□□ -1.37
YCK1YHR135C RPS3P05750 240 aaKnown RBP6.47□□□□□ -1.37
YCK1YHR135C MSH1P25846 959 aa6.47□□□□□ -1.37
YCK1YHR135C MLF3P32047 452 aa6.47□□□□□ -1.37
YCK1YHR135C TIM23P32897 222 aa6.47□□□□□ -1.37
YCK1YHR135C YBL055CP34220 418 aaPredicted RBP6.47□□□□□ -1.37
YCK1YHR135C ECM2P38241 364 aaKnown RBP6.47□□□□□ -1.37
YCK1YHR135C SPP381P38282 291 aaPredicted RBP6.47□□□□□ -1.37
YCK1YHR135C END3P39013 349 aa6.47□□□□□ -1.37
YCK1YHR135C SKP2P42843 763 aa6.47□□□□□ -1.37
YCK1YHR135C EEB1Q02891 456 aa6.47□□□□□ -1.37
YCK1YHR135C SNU56Q03782 492 aaKnown RBP6.47□□□□□ -1.37
YCK1YHR135C ATG16Q03818 150 aa6.47□□□□□ -1.37
YCK1YHR135C UFO1Q04511 668 aa6.47□□□□□ -1.37
YCK1YHR135C YLR455WQ06188 304 aa6.47□□□□□ -1.37
YCK1YHR135C ACM1Q08981 209 aa6.47□□□□□ -1.37
YCK1YHR135C BI3Q9ZZW7 517 aa6.47□□□□□ -1.37
YCK1YHR135C GAL10P04397 699 aa6.46□□□□□ -1.38
YCK1YHR135C PUF4P25339 888 aaKnown RBP RIP-Chip data6.46□□□□□ -1.38not detected
YCK1YHR135C PEX2P32800 271 aa6.46□□□□□ -1.38
YCK1YHR135C SKG6P32900 734 aaPredicted RBP6.46□□□□□ -1.38
YCK1YHR135C TRM2P33753 639 aa6.46□□□□□ -1.38
YCK1YHR135C TIF5P38431 405 aaKnown RBP6.46□□□□□ -1.38
YCK1YHR135C VPS41P38959 992 aa6.46□□□□□ -1.38
YCK1YHR135C SAH1P39954 449 aaKnown RBP6.46□□□□□ -1.38
YCK1YHR135C PUS2P53167 370 aa6.46□□□□□ -1.38
YCK1YHR135C NOG2P53742 486 aaKnown RBP6.46□□□□□ -1.38
YCK1YHR135C YNL165WP53891 406 aa6.46□□□□□ -1.38
YCK1YHR135C DAK1P54838 584 aaKnown RBP6.46□□□□□ -1.38
YCK1YHR135C UTP6Q02354 440 aaKnown RBP6.46□□□□□ -1.38
YCK1YHR135C CWC21Q03375 135 aaKnown RBP6.46□□□□□ -1.38
YCK1YHR135C PNP1Q05788 311 aa6.46□□□□□ -1.38
YCK1YHR135C RIO1Q12196 484 aaKnown RBP6.46□□□□□ -1.38
YCK1YHR135C GLN3P18494 730 aa6.45□□□□□ -1.38
YCK1YHR135C MSS51P32335 436 aa6.45□□□□□ -1.38
YCK1YHR135C UBC6P33296 250 aaPredicted RBP6.45□□□□□ -1.38
YCK1YHR135C SEG2P34250 1132 aa6.45□□□□□ -1.38
YCK1YHR135C GPT2P36148 743 aa6.45□□□□□ -1.38
YCK1YHR135C UBX7P38349 436 aa6.45□□□□□ -1.38
YCK1YHR135C MSG5P38590 489 aa6.45□□□□□ -1.38
YCK1YHR135C MMS21P38632 267 aa6.45□□□□□ -1.38
YCK1YHR135C TMN3P40071 706 aa6.45□□□□□ -1.38
YCK1YHR135C ASG7P46993 209 aa6.45□□□□□ -1.38
YCK1YHR135C YJR079WP47126 109 aa6.45□□□□□ -1.38
YCK1YHR135C GPD1Q00055 391 aaKnown RBP6.45□□□□□ -1.38
YCK1YHR135C MTG1Q03151 367 aaPredicted RBP6.45□□□□□ -1.38
YCK1YHR135C VPS72Q03388 795 aa6.45□□□□□ -1.38
YCK1YHR135C CDD1Q06549 142 aa6.45□□□□□ -1.38
YCK1YHR135C OMS1Q06668 471 aa6.45□□□□□ -1.38
YCK1YHR135C RUD3Q12234 484 aaKnown RBP6.45□□□□□ -1.38
YCK1YHR135C RAD10P06838 210 aa6.44□□□□□ -1.38
YCK1YHR135C YER152CP10356 443 aa6.44□□□□□ -1.38
YCK1YHR135C PYC1P11154 1178 aaKnown RBP6.44□□□□□ -1.38
YCK1YHR135C SAK1P38990 1142 aa6.44□□□□□ -1.38
YCK1YHR135C CCT2P39076 527 aaKnown RBP6.44□□□□□ -1.38
YCK1YHR135C INP51P40559 946 aaKnown RBP6.44□□□□□ -1.38
YCK1YHR135C MKT1P40850 830 aaKnown RBP6.44□□□□□ -1.38
YCK1YHR135C STE23Q06010 1027 aa6.44□□□□□ -1.38
YCK1YHR135C PUF3Q07807 879 aaKnown RBP RIP-Chip data6.44□□□□□ -1.38not detected
YCK1YHR135C ICL2Q12031 575 aa6.44□□□□□ -1.38
YCK1YHR135C SGT2Q12118 346 aaKnown RBP6.44□□□□□ -1.38
YCK1YHR135C PUS1Q12211 544 aaKnown RBP6.44□□□□□ -1.38
YCK1YHR135C TIF6Q12522 245 aaKnown RBP6.44□□□□□ -1.38
YCK1YHR135C SNA3P14359 133 aa6.43□□□□□ -1.38
YCK1YHR135C PLC1P32383 869 aa6.43□□□□□ -1.38
YCK1YHR135C EFB1P32471 206 aaKnown RBP6.43□□□□□ -1.38
YCK1YHR135C ABD1P32783 436 aaPredicted RBP6.43□□□□□ -1.38
YCK1YHR135C AGP2P38090 596 aa6.43□□□□□ -1.38
YCK1YHR135C GDT1P38301 280 aaPredicted RBP6.43□□□□□ -1.38
YCK1YHR135C VHC1P38329 1120 aa6.43□□□□□ -1.38
YCK1YHR135C APM2P38700 605 aa6.43□□□□□ -1.38
YCK1YHR135C QNS1P38795 714 aaKnown RBP6.43□□□□□ -1.38
YCK1YHR135C AFG3P39925 761 aa6.43□□□□□ -1.38
YCK1YHR135C AIM21P40563 679 aa6.43□□□□□ -1.38
YCK1YHR135C ALT1P52893 592 aa6.43□□□□□ -1.38
YCK1YHR135C YGL036WP53185 909 aaPredicted RBP6.43□□□□□ -1.38
YCK1YHR135C MRS2Q01926 470 aa6.43□□□□□ -1.38
YCK1YHR135C CUS1Q02554 436 aaPredicted RBP6.43□□□□□ -1.38
YCK1YHR135C DOT1Q04089 582 aaKnown RBP6.43□□□□□ -1.38
YCK1YHR135C IVY1Q04934 453 aa6.43□□□□□ -1.38
YCK1YHR135C ADE3P07245 946 aaKnown RBP6.43□□□□□ -1.38
YCK1YHR135C EST1P17214 699 aaPredicted RBP6.43□□□□□ -1.38
YCK1YHR135C ADE2P21264 571 aaKnown RBP6.43□□□□□ -1.38
YCK1YHR135C PUP1P25043 261 aa6.43□□□□□ -1.38
YCK1YHR135C YHR054CP38780 354 aa6.43□□□□□ -1.38
YCK1YHR135C YER186CP40101 306 aa6.43□□□□□ -1.38
YCK1YHR135C KHA1P40309 873 aa6.43□□□□□ -1.38
YCK1YHR135C RPT2P40327 437 aaKnown RBP6.43□□□□□ -1.38
YCK1YHR135C RAD26P40352 1085 aa6.43□□□□□ -1.38
YCK1YHR135C SAP185P40856 1058 aa6.43□□□□□ -1.38
YCK1YHR135C LAM5P43560 674 aa6.43□□□□□ -1.38
YCK1YHR135C YJR039WP47107 1121 aa6.43□□□□□ -1.38
YCK1YHR135C YJR107WP47145 328 aa6.43□□□□□ -1.38
YCK1YHR135C STB4P50104 949 aa6.43□□□□□ -1.38
YCK1YHR135C MTO1P53070 669 aa6.43□□□□□ -1.38
YCK1YHR135C ALG11P53954 548 aaKnown RBP6.43□□□□□ -1.38
YCK1YHR135C MUK1Q02866 612 aa6.43□□□□□ -1.38
Retrieved 100 of 5,963 RNA–protein pairs in 39 ms