RNA–Protein interactions for RNA: YHR066W

SSF1, Transcript of Constituent of 66S pre-ribosomal particles, yeastyeast

Gene SSF1, Length 1,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSF1YHR066W TIM50Q02776 476 aa3.47□□□□□ -1.85
SSF1YHR066W SKY1Q03656 742 aa3.47□□□□□ -1.85
SSF1YHR066W YPR027CQ12079 277 aa3.47□□□□□ -1.85
SSF1YHR066W AEP2P22136 580 aa3.46□□□□□ -1.86
SSF1YHR066W DMC1P25453 334 aa3.46□□□□□ -1.86
SSF1YHR066W NTH1P32356 751 aa3.46□□□□□ -1.86
SSF1YHR066W ELF1P36053 145 aa3.46□□□□□ -1.86
SSF1YHR066W RNR4P49723 345 aaKnown RBP3.46□□□□□ -1.86
SSF1YHR066W DIP5P53388 608 aa3.46□□□□□ -1.86
SSF1YHR066W FDC1Q03034 503 aa3.46□□□□□ -1.86
SSF1YHR066W YSH1Q06224 779 aaPredicted RBP3.46□□□□□ -1.86
SSF1YHR066W NGL1Q08213 363 aaKnown RBP3.46□□□□□ -1.86
SSF1YHR066W TRE2Q08693 809 aa3.46□□□□□ -1.86
SSF1YHR066W RKI1Q12189 258 aa3.46□□□□□ -1.86
SSF1YHR066W LAM4P38800 1345 aa3.45□□□□□ -1.86
SSF1YHR066W DGR2P32330 852 aa3.45□□□□□ -1.86
SSF1YHR066W PAF1P38351 445 aa3.45□□□□□ -1.86
SSF1YHR066W YHR033WP38690 423 aa3.45□□□□□ -1.86
SSF1YHR066W MIT1P40002 666 aa3.45□□□□□ -1.86
SSF1YHR066W YDL183CP48569 320 aa3.45□□□□□ -1.86
SSF1YHR066W BMS1Q08965 1183 aaKnown RBP3.45□□□□□ -1.86
SSF1YHR066W SSB1P11484 613 aaKnown RBP3.44□□□□□ -1.86
SSF1YHR066W HCA4P20448 770 aaKnown RBP3.44□□□□□ -1.86
SSF1YHR066W HEM12P32347 362 aaPredicted RBP3.44□□□□□ -1.86
SSF1YHR066W APL3P38065 1025 aa3.44□□□□□ -1.86
SSF1YHR066W YMC2P38087 329 aa3.44□□□□□ -1.86
SSF1YHR066W SSB2P40150 613 aaKnown RBP3.44□□□□□ -1.86
SSF1YHR066W SPC98P53540 846 aa3.44□□□□□ -1.86
SSF1YHR066W FOL1P53848 824 aa3.44□□□□□ -1.86
SSF1YHR066W HLR1Q04429 423 aa3.44□□□□□ -1.86
SSF1YHR066W BNR1P40450 1375 aa3.44□□□□□ -1.86
SSF1YHR066W PHO5P00635 467 aa3.43□□□□□ -1.86
SSF1YHR066W HMG2P12684 1045 aa3.43□□□□□ -1.86
SSF1YHR066W COX11P19516 300 aaKnown RBP3.43□□□□□ -1.86
SSF1YHR066W KCC4P25389 1037 aa3.43□□□□□ -1.86
SSF1YHR066W ADY2P25613 283 aa3.43□□□□□ -1.86
SSF1YHR066W PLC1P32383 869 aa3.43□□□□□ -1.86
SSF1YHR066W RMA1P36001 430 aaKnown RBP3.43□□□□□ -1.86
SSF1YHR066W FLO10P36170 1169 aa3.43□□□□□ -1.86
SSF1YHR066W EHT1P38295 451 aa3.43□□□□□ -1.86
SSF1YHR066W YIL166CP40445 542 aa3.43□□□□□ -1.86
SSF1YHR066W IRC5P43610 853 aa3.43□□□□□ -1.86
SSF1YHR066W ENP2P48234 707 aaKnown RBP3.43□□□□□ -1.86
SSF1YHR066W SPC105P53148 917 aa3.43□□□□□ -1.86
SSF1YHR066W YGR054WP53235 642 aaKnown RBP3.43□□□□□ -1.86
SSF1YHR066W LGE1Q02796 332 aaKnown RBP3.43□□□□□ -1.86
SSF1YHR066W UFO1Q04511 668 aa3.43□□□□□ -1.86
SSF1YHR066W ECM38Q05902 660 aaPredicted RBP3.43□□□□□ -1.86
SSF1YHR066W YCG1Q06680 1035 aa3.43□□□□□ -1.86
SSF1YHR066W YEL076C-AP0CX16 216 aa3.42□□□□□ -1.86
SSF1YHR066W YLR464WP0CX17 216 aa3.42□□□□□ -1.86
SSF1YHR066W STE4P18851 423 aa3.42□□□□□ -1.86
SSF1YHR066W PPZ2P33329 710 aa3.42□□□□□ -1.86
SSF1YHR066W TFC4P33339 1025 aa3.42□□□□□ -1.86
SSF1YHR066W MRPL7P36519 292 aa3.42□□□□□ -1.86
SSF1YHR066W SRP68P38687 599 aaKnown RBP3.42□□□□□ -1.86
SSF1YHR066W PPE1P38796 400 aa3.42□□□□□ -1.86
SSF1YHR066W YEL076CP39971 216 aa3.42□□□□□ -1.86
SSF1YHR066W YEL020CP39994 560 aa3.42□□□□□ -1.86
SSF1YHR066W EAF5P39995 279 aa3.42□□□□□ -1.86
SSF1YHR066W PMT6P42934 759 aa3.42□□□□□ -1.86
SSF1YHR066W YOR378WQ08902 515 aa3.42□□□□□ -1.86
SSF1YHR066W MRC1P25588 1096 aa3.41□□□□□ -1.86
SSF1YHR066W MUP3P38734 546 aa3.41□□□□□ -1.86
SSF1YHR066W RIX1P38883 763 aaPredicted RBP3.41□□□□□ -1.86
SSF1YHR066W PEA2P40091 420 aa3.41□□□□□ -1.86
SSF1YHR066W SLD3P53135 668 aa3.41□□□□□ -1.86
SSF1YHR066W PEF1P53238 335 aa3.41□□□□□ -1.86
SSF1YHR066W APM1Q00776 475 aaPredicted RBP3.41□□□□□ -1.86
SSF1YHR066W EFR3Q03653 782 aaKnown RBP3.41□□□□□ -1.86
SSF1YHR066W YDR179W-AQ03983 463 aa3.41□□□□□ -1.86
SSF1YHR066W ARR3Q06598 404 aa3.41□□□□□ -1.86
SSF1YHR066W CWC2Q12046 339 aaPredicted RBP3.41□□□□□ -1.86
SSF1YHR066W STE12P13574 688 aa3.4□□□□□ -1.86
SSF1YHR066W LRO1P40345 661 aa3.4□□□□□ -1.86
SSF1YHR066W PEX14P53112 341 aa3.4□□□□□ -1.86
SSF1YHR066W MTD1Q02046 320 aaKnown RBP3.4□□□□□ -1.86
SSF1YHR066W TRS23Q03784 219 aa3.4□□□□□ -1.86
SSF1YHR066W ARO10Q06408 635 aa3.4□□□□□ -1.86
SSF1YHR066W AIM41Q12032 185 aa3.4□□□□□ -1.86
SSF1YHR066W RPN13O13563 156 aa3.39□□□□□ -1.87
SSF1YHR066W TUB1P09733 447 aaKnown RBP3.39□□□□□ -1.87
SSF1YHR066W SPO11P23179 398 aa3.39□□□□□ -1.87
SSF1YHR066W PMC1P38929 1173 aaPredicted RBP3.39□□□□□ -1.87
SSF1YHR066W EMP65P40085 556 aa3.39□□□□□ -1.87
SSF1YHR066W ASN1P49089 572 aaKnown RBP3.39□□□□□ -1.87
SSF1YHR066W MNT2P53059 558 aa3.39□□□□□ -1.87
SSF1YHR066W SQS1P53866 767 aaKnown RBP3.39□□□□□ -1.87
SSF1YHR066W PEX15Q08215 383 aa3.39□□□□□ -1.87
SSF1YHR066W MDM20Q12387 796 aaKnown RBP3.39□□□□□ -1.87
SSF1YHR066W KAR1P11927 433 aa3.38□□□□□ -1.87
SSF1YHR066W CNE1P27825 502 aa3.38□□□□□ -1.87
SSF1YHR066W PEX2P32800 271 aa3.38□□□□□ -1.87
SSF1YHR066W PAC2P39937 518 aa3.38□□□□□ -1.87
SSF1YHR066W YEL025CP39991 1188 aa3.38□□□□□ -1.87
SSF1YHR066W YIP4P53093 235 aa3.38□□□□□ -1.87
SSF1YHR066W DAK1P54838 584 aaKnown RBP3.38□□□□□ -1.87
SSF1YHR066W NGL2Q03264 515 aaKnown RBP3.38□□□□□ -1.87
SSF1YHR066W PHM6Q05637 104 aa3.38□□□□□ -1.87
SSF1YHR066W RTK1Q12100 620 aaPredicted RBP3.38□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms