RNA–Protein interactions for RNA: YHR012W

VPS29, Transcript of Subunit of the membrane-associated retromer complex, yeastyeast

Gene VPS29, Length 849 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS29YHR012W SLX4Q12098 748 aa5.16□□□□□ -1.58
VPS29YHR012W NUM1Q00402 2748 aa5.15□□□□□ -1.58
VPS29YHR012W JIP3O13555 125 aa5.15□□□□□ -1.59
VPS29YHR012W CDC42P19073 191 aa5.15□□□□□ -1.59
VPS29YHR012W APL1P27351 700 aa5.15□□□□□ -1.59
VPS29YHR012W SGE1P33335 543 aa5.15□□□□□ -1.59
VPS29YHR012W GIP1P38229 639 aa5.15□□□□□ -1.59
VPS29YHR012W PPX1P38698 397 aa5.15□□□□□ -1.59
VPS29YHR012W BDH2P39713 417 aa5.15□□□□□ -1.59
VPS29YHR012W CCT5P40413 562 aaKnown RBP5.15□□□□□ -1.59
VPS29YHR012W PFD1P46988 109 aa5.15□□□□□ -1.59
VPS29YHR012W CPR7P47103 393 aa5.15□□□□□ -1.59
VPS29YHR012W RPA14P50106 137 aa5.15□□□□□ -1.59
VPS29YHR012W NUP84P52891 726 aa5.15□□□□□ -1.59
VPS29YHR012W NMA2P53204 395 aa5.15□□□□□ -1.59
VPS29YHR012W RSC1P53236 928 aa5.15□□□□□ -1.59
VPS29YHR012W HST1P53685 503 aa5.15□□□□□ -1.59
VPS29YHR012W YNR065CP53751 1116 aa5.15□□□□□ -1.59
VPS29YHR012W CWC24P53769 259 aa5.15□□□□□ -1.59
VPS29YHR012W JIP5Q06214 492 aaPredicted RBP5.15□□□□□ -1.59
VPS29YHR012W TRE1Q08919 783 aa5.15□□□□□ -1.59
VPS29YHR012W YPL216WQ08964 1102 aa5.15□□□□□ -1.59
VPS29YHR012W FAL1Q12099 399 aaKnown RBP5.15□□□□□ -1.59
VPS29YHR012W IRA2P19158 3079 aa5.14□□□□□ -1.59
VPS29YHR012W REV1P12689 985 aa5.14□□□□□ -1.59
VPS29YHR012W AEP2P22136 580 aa5.14□□□□□ -1.59
VPS29YHR012W EFM2P38347 419 aa5.14□□□□□ -1.59
VPS29YHR012W TIF5P38431 405 aaKnown RBP5.14□□□□□ -1.59
VPS29YHR012W HEM14P40012 539 aa5.14□□□□□ -1.59
VPS29YHR012W CDC1P40986 491 aa5.14□□□□□ -1.59
VPS29YHR012W UFE1P41834 346 aa5.14□□□□□ -1.59
VPS29YHR012W YPT11P48559 417 aa5.14□□□□□ -1.59
VPS29YHR012W YGL036WP53185 909 aaPredicted RBP5.14□□□□□ -1.59
VPS29YHR012W GYL1Q04322 720 aa5.14□□□□□ -1.59
VPS29YHR012W YLR297WQ05899 129 aa5.14□□□□□ -1.59
VPS29YHR012W PMT7Q06644 662 aa5.14□□□□□ -1.59
VPS29YHR012W YPR097WQ06839 1073 aa5.14□□□□□ -1.59
VPS29YHR012W CLP1Q08685 445 aaPredicted RBP5.14□□□□□ -1.59
VPS29YHR012W DDC1Q08949 612 aa5.14□□□□□ -1.59
VPS29YHR012W LPX1Q12405 387 aaKnown RBP5.14□□□□□ -1.59
VPS29YHR012W YDL206WQ12424 762 aa5.14□□□□□ -1.59
VPS29YHR012W STB3Q12427 513 aa5.14□□□□□ -1.59
VPS29YHR012W YER152CP10356 443 aa5.13□□□□□ -1.59
VPS29YHR012W PSO2P30620 661 aa5.13□□□□□ -1.59
VPS29YHR012W SWE1P32944 819 aa5.13□□□□□ -1.59
VPS29YHR012W CSG2P35206 410 aa5.13□□□□□ -1.59
VPS29YHR012W KTR4P38131 464 aa5.13□□□□□ -1.59
VPS29YHR012W ECM13P38195 257 aa5.13□□□□□ -1.59
VPS29YHR012W PIK1P39104 1066 aa5.13□□□□□ -1.59
VPS29YHR012W GDH3P39708 457 aa5.13□□□□□ -1.59
VPS29YHR012W YGR237CP50089 785 aa5.13□□□□□ -1.59
VPS29YHR012W HFM1P51979 1187 aa5.13□□□□□ -1.59
VPS29YHR012W HOP2P53187 214 aa5.13□□□□□ -1.59
VPS29YHR012W PPM1Q04081 328 aa5.13□□□□□ -1.59
VPS29YHR012W RTN1Q04947 295 aaKnown RBP5.13□□□□□ -1.59
VPS29YHR012W TAF9Q05027 157 aa5.13□□□□□ -1.59
VPS29YHR012W RCL1Q08096 367 aaPredicted RBP5.13□□□□□ -1.59
VPS29YHR012W SVS1Q12254 260 aa5.13□□□□□ -1.59
VPS29YHR012W ECM3Q99252 613 aa5.13□□□□□ -1.59
VPS29YHR012W AI5_BETAQ9ZZX0 354 aa5.13□□□□□ -1.59
VPS29YHR012W CDC37P06101 506 aaKnown RBP5.12□□□□□ -1.59
VPS29YHR012W PPR1P07272 904 aaPredicted RBP5.12□□□□□ -1.59
VPS29YHR012W SLY41P22215 453 aa5.12□□□□□ -1.59
VPS29YHR012W SAT4P25333 603 aaKnown RBP5.12□□□□□ -1.59
VPS29YHR012W TCD2P36101 447 aaKnown RBP5.12□□□□□ -1.59
VPS29YHR012W YBR053CP38235 358 aa5.12□□□□□ -1.59
VPS29YHR012W YJR061WP40355 935 aa5.12□□□□□ -1.59
VPS29YHR012W ERG10P41338 398 aaKnown RBP5.12□□□□□ -1.59
VPS29YHR012W AAD14P42884 376 aa5.12□□□□□ -1.59
VPS29YHR012W RMD8P43620 662 aa5.12□□□□□ -1.59
VPS29YHR012W FLC3P53121 802 aa5.12□□□□□ -1.59
VPS29YHR012W KRE33P53914 1056 aaKnown RBP5.12□□□□□ -1.59
VPS29YHR012W GPD1Q00055 391 aaKnown RBP5.12□□□□□ -1.59
VPS29YHR012W EAF1Q06337 982 aa5.12□□□□□ -1.59
VPS29YHR012W YDL073WQ07454 984 aa5.12□□□□□ -1.59
VPS29YHR012W CCP1P00431 361 aa5.11□□□□□ -1.59
VPS29YHR012W ENO2P00925 437 aaKnown RBP5.11□□□□□ -1.59
VPS29YHR012W STE5P32917 917 aa5.11□□□□□ -1.59
VPS29YHR012W TYE7P33122 291 aaPredicted RBP5.11□□□□□ -1.59
VPS29YHR012W STE13P33894 931 aa5.11□□□□□ -1.59
VPS29YHR012W ADE17P38009 592 aaKnown RBP5.11□□□□□ -1.59
VPS29YHR012W DYS1P38791 387 aa5.11□□□□□ -1.59
VPS29YHR012W DUN1P39009 513 aa5.11□□□□□ -1.59
VPS29YHR012W GIP4P39732 760 aa5.11□□□□□ -1.59
VPS29YHR012W YER130CP39959 443 aa5.11□□□□□ -1.59
VPS29YHR012W YJR079WP47126 109 aa5.11□□□□□ -1.59
VPS29YHR012W LYS5P50113 272 aa5.11□□□□□ -1.59
VPS29YHR012W PYK2P52489 506 aaKnown RBP5.11□□□□□ -1.59
VPS29YHR012W COQ6P53318 479 aa5.11□□□□□ -1.59
VPS29YHR012W NRD1P53617 575 aaKnown RBP RIP-Chip data5.11□□□□□ -1.59not detected
VPS29YHR012W EBS1Q03466 884 aaKnown RBP5.11□□□□□ -1.59
VPS29YHR012W GFD1Q04839 188 aaKnown RBP5.11□□□□□ -1.59
VPS29YHR012W HRD3Q05787 833 aa5.11□□□□□ -1.59
VPS29YHR012W ECM38Q05902 660 aaPredicted RBP5.11□□□□□ -1.59
VPS29YHR012W SPO75Q07798 868 aa5.11□□□□□ -1.59
VPS29YHR012W MDM38Q08179 573 aa5.11□□□□□ -1.59
VPS29YHR012W AFT2Q08957 416 aa5.11□□□□□ -1.59
VPS29YHR012W LSP1Q12230 341 aaKnown RBP5.11□□□□□ -1.59
VPS29YHR012W ARP7Q12406 477 aa5.11□□□□□ -1.59
VPS29YHR012W YOL098CQ12496 1037 aa5.11□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 19.9 ms