RNA–Protein interactions for RNA: YFR010W

UBP6, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP6, Length 1,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP6YFR010W VPS17P32913 551 aa4.39□□□□□ -1.71
UBP6YFR010W XRS2P33301 854 aa4.39□□□□□ -1.71
UBP6YFR010W MDL2P33311 773 aa4.39□□□□□ -1.71
UBP6YFR010W SLC1P33333 303 aa4.39□□□□□ -1.71
UBP6YFR010W SHM2P37291 469 aaKnown RBP4.39□□□□□ -1.71
UBP6YFR010W CCZ1P38273 704 aa4.39□□□□□ -1.71
UBP6YFR010W YBR238CP38330 731 aaKnown RBP4.39□□□□□ -1.71
UBP6YFR010W AXL2P38928 823 aa4.39□□□□□ -1.71
UBP6YFR010W SMC2P38989 1170 aaKnown RBP4.39□□□□□ -1.71
UBP6YFR010W GPB2P39717 880 aa4.39□□□□□ -1.71
UBP6YFR010W HXT13P39924 564 aa4.39□□□□□ -1.71
UBP6YFR010W GDI1P39958 451 aaKnown RBP4.39□□□□□ -1.71
UBP6YFR010W MKT1P40850 830 aaKnown RBP4.39□□□□□ -1.71
UBP6YFR010W ZIM17P42844 174 aa4.39□□□□□ -1.71
UBP6YFR010W CIR1P42940 261 aa4.39□□□□□ -1.71
UBP6YFR010W UBP6P43593 499 aaKnown RBP4.39□□□□□ -1.71
UBP6YFR010W YGR153WP48238 217 aa4.39□□□□□ -1.71
UBP6YFR010W PSP2P50109 593 aaKnown RBP4.39□□□□□ -1.71
UBP6YFR010W HXT17P53631 564 aa4.39□□□□□ -1.71
UBP6YFR010W MOT3P54785 490 aaKnown RBP4.39□□□□□ -1.71
UBP6YFR010W HXT15P54854 567 aa4.39□□□□□ -1.71
UBP6YFR010W ADA2Q02336 434 aa4.39□□□□□ -1.71
UBP6YFR010W RMT2Q03305 412 aa4.39□□□□□ -1.71
UBP6YFR010W COG8Q04632 607 aa4.39□□□□□ -1.71
UBP6YFR010W MCP2Q06567 569 aa4.39□□□□□ -1.71
UBP6YFR010W ISA2Q12425 185 aa4.39□□□□□ -1.71
UBP6YFR010W NOP56Q12460 504 aaKnown RBP RIP-Chip data4.39□□□□□ -1.71not detected
UBP6YFR010W CTT1P06115 562 aa4.38□□□□□ -1.71
UBP6YFR010W CDC16P09798 840 aa4.38□□□□□ -1.71
UBP6YFR010W LAT1P12695 482 aaKnown RBP4.38□□□□□ -1.71
UBP6YFR010W PFK2P16862 959 aaKnown RBP RIP-Chip data4.38□□□□□ -1.71not detected
UBP6YFR010W GAS1P22146 559 aaKnown RBP4.38□□□□□ -1.71
UBP6YFR010W ROX1P25042 368 aa4.38□□□□□ -1.71
UBP6YFR010W RRP7P25368 297 aaPredicted RBP4.38□□□□□ -1.71
UBP6YFR010W SPB1P25582 841 aaPredicted RBP4.38□□□□□ -1.71
UBP6YFR010W KIP1P28742 1111 aa4.38□□□□□ -1.71
UBP6YFR010W GPI10P30777 616 aa4.38□□□□□ -1.71
UBP6YFR010W MLS1P30952 554 aa4.38□□□□□ -1.71
UBP6YFR010W EFB1P32471 206 aaKnown RBP4.38□□□□□ -1.71
UBP6YFR010W SMI1P32566 505 aa4.38□□□□□ -1.71
UBP6YFR010W YSC84P32793 468 aa4.38□□□□□ -1.71
UBP6YFR010W SWH1P35845 1188 aa4.38□□□□□ -1.71
UBP6YFR010W YBR225WP38321 900 aa4.38□□□□□ -1.71
UBP6YFR010W SWD1P39706 426 aa4.38□□□□□ -1.71
UBP6YFR010W UBP5P39944 805 aa4.38□□□□□ -1.71
UBP6YFR010W LTP1P40347 161 aa4.38□□□□□ -1.71
UBP6YFR010W EPL1P43572 832 aa4.38□□□□□ -1.71
UBP6YFR010W NNF2P53253 936 aa4.38□□□□□ -1.71
UBP6YFR010W YGR266WP53326 701 aa4.38□□□□□ -1.71
UBP6YFR010W ARC35P53731 342 aaKnown RBP4.38□□□□□ -1.71
UBP6YFR010W DSL1P53847 754 aa4.38□□□□□ -1.71
UBP6YFR010W TEP1P53916 434 aa4.38□□□□□ -1.71
UBP6YFR010W PNG1Q02890 363 aa4.38□□□□□ -1.71
UBP6YFR010W SKY1Q03656 742 aa4.38□□□□□ -1.71
UBP6YFR010W HLR1Q04429 423 aa4.38□□□□□ -1.71
UBP6YFR010W GUD1Q07729 489 aa4.38□□□□□ -1.71
UBP6YFR010W ARP7Q12406 477 aa4.38□□□□□ -1.71
UBP6YFR010W FRE6Q12473 712 aa4.38□□□□□ -1.71
UBP6YFR010W SYP1P25623 870 aaKnown RBP4.37□□□□□ -1.71
UBP6YFR010W TSA1P34760 196 aaKnown RBP4.37□□□□□ -1.71
UBP6YFR010W DID4P36108 232 aa4.37□□□□□ -1.71
UBP6YFR010W PCM1P38628 557 aaKnown RBP4.37□□□□□ -1.71
UBP6YFR010W DED81P38707 554 aaKnown RBP4.37□□□□□ -1.71
UBP6YFR010W GND1P38720 489 aaKnown RBP4.37□□□□□ -1.71
UBP6YFR010W RTS1P38903 757 aa4.37□□□□□ -1.71
UBP6YFR010W NPR2P39923 615 aa4.37□□□□□ -1.71
UBP6YFR010W SMK1P41808 388 aa4.37□□□□□ -1.71
UBP6YFR010W YGL176CP46945 554 aa4.37□□□□□ -1.71
UBP6YFR010W LSB1P53281 241 aa4.37□□□□□ -1.71
UBP6YFR010W ARE2P53629 642 aaKnown RBP4.37□□□□□ -1.71
UBP6YFR010W YNR068CP53754 272 aa4.37□□□□□ -1.71
UBP6YFR010W YPL107WQ02873 248 aa4.37□□□□□ -1.71
UBP6YFR010W YML119WQ03208 357 aa4.37□□□□□ -1.71
UBP6YFR010W ECM38Q05902 660 aaPredicted RBP4.37□□□□□ -1.71
UBP6YFR010W CDA2Q06703 312 aa4.37□□□□□ -1.71
UBP6YFR010W YDL177CQ12257 170 aa4.37□□□□□ -1.71
UBP6YFR010W PDH1Q12428 516 aaKnown RBP4.37□□□□□ -1.71
UBP6YFR010W CPA2P03965 1118 aaKnown RBP4.36□□□□□ -1.71
UBP6YFR010W SNF1P06782 633 aaKnown RBP4.36□□□□□ -1.71
UBP6YFR010W AIM26P32858 118 aa4.36□□□□□ -1.71
UBP6YFR010W LOT5P34234 306 aa4.36□□□□□ -1.71
UBP6YFR010W LAS1P36146 502 aaPredicted RBP4.36□□□□□ -1.71
UBP6YFR010W MBP1P39678 833 aa4.36□□□□□ -1.71
UBP6YFR010W YJL070CP40361 888 aa4.36□□□□□ -1.71
UBP6YFR010W UBP7P40453 1071 aa4.36□□□□□ -1.71
UBP6YFR010W LCB2P40970 561 aa4.36□□□□□ -1.71
UBP6YFR010W NOP9P47077 666 aaKnown RBP4.36□□□□□ -1.71
UBP6YFR010W SHE4P51534 789 aa4.36□□□□□ -1.71
UBP6YFR010W VPS4P52917 437 aa4.36□□□□□ -1.71
UBP6YFR010W RPN14P53196 417 aa4.36□□□□□ -1.71
UBP6YFR010W FCP1Q03254 732 aa4.36□□□□□ -1.71
UBP6YFR010W TIF35Q04067 274 aaKnown RBP4.36□□□□□ -1.71
UBP6YFR010W RBA50Q04418 439 aa4.36□□□□□ -1.71
UBP6YFR010W ADE13Q05911 482 aaKnown RBP4.36□□□□□ -1.71
UBP6YFR010W YLL032CQ07834 825 aaKnown RBP RIP-Chip data4.36□□□□□ -1.71not detected
UBP6YFR010W RCL1Q08096 367 aaPredicted RBP4.36□□□□□ -1.71
UBP6YFR010W SKS1Q12505 502 aa4.36□□□□□ -1.71
UBP6YFR010W ADF1Q2V2Q1 113 aa4.36□□□□□ -1.71
UBP6YFR010W SUP35P05453 685 aaKnown RBP4.36□□□□□ -1.71
UBP6YFR010W MET17P06106 444 aa4.36□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms