RNA–Protein interactions for RNA: YFL040W

YFL040W, Transcript of Putative transporter, yeast

Gene YFL040W, Length 1,623 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YFL040W	YFL040W	HXT4	P32467	576 aa		4.76	□□□□□ -1.65
YFL040W	YFL040W	BCS1	P32839	456 aa		4.76	□□□□□ -1.65
YFL040W	YFL040W	SRP68	P38687	599 aa	Known RBP	4.76	□□□□□ -1.65
YFL040W	YFL040W	ENP2	P48234	707 aa	Known RBP	4.76	□□□□□ -1.65
YFL040W	YFL040W	TAF4	P50105	388 aa		4.76	□□□□□ -1.65
YFL040W	YFL040W	NSE5	Q03718	556 aa		4.76	□□□□□ -1.65
YFL040W	YFL040W	PPN1	Q04119	674 aa		4.76	□□□□□ -1.65
YFL040W	YFL040W	GSF2	Q04697	403 aa	Known RBP	4.76	□□□□□ -1.65
YFL040W	YFL040W	NKP1	Q12493	238 aa		4.76	□□□□□ -1.65
YFL040W	YFL040W	RPA135	P22138	1203 aa	Known RBP	4.75	□□□□□ -1.65
YFL040W	YFL040W	FEN2	P25621	512 aa	Known RBP	4.75	□□□□□ -1.65
YFL040W	YFL040W	PIG2	P40187	538 aa		4.75	□□□□□ -1.65
YFL040W	YFL040W	TEL2	P53038	688 aa		4.75	□□□□□ -1.65
YFL040W	YFL040W	RIA1	P53893	1110 aa		4.75	□□□□□ -1.65
YFL040W	YFL040W	PRE4	P30657	266 aa		4.75	□□□□□ -1.65
YFL040W	YFL040W	PHO11	P35842	467 aa		4.75	□□□□□ -1.65
YFL040W	YFL040W	COS111	P38308	924 aa		4.75	□□□□□ -1.65
YFL040W	YFL040W	PHO12	P38693	467 aa		4.75	□□□□□ -1.65
YFL040W	YFL040W	CHS7	P38843	316 aa		4.75	□□□□□ -1.65
YFL040W	YFL040W	YIL077C	P40508	320 aa		4.75	□□□□□ -1.65
YFL040W	YFL040W	IRC5	P43610	853 aa		4.75	□□□□□ -1.65
YFL040W	YFL040W	FHN1	P53279	174 aa		4.75	□□□□□ -1.65
YFL040W	YFL040W	MLC2	Q06580	163 aa		4.75	□□□□□ -1.65
YFL040W	YFL040W	YFT2	Q06676	274 aa		4.75	□□□□□ -1.65
YFL040W	YFL040W	RRP6	Q12149	733 aa	Known RBP	4.75	□□□□□ -1.65
YFL040W	YFL040W	CLF1	Q12309	687 aa	Predicted RBP	4.75	□□□□□ -1.65
YFL040W	YFL040W	TAF2	P23255	1407 aa		4.75	□□□□□ -1.65
YFL040W	YFL040W	PRP28	P23394	588 aa		4.74	□□□□□ -1.65
YFL040W	YFL040W	DPB3	P27344	201 aa		4.74	□□□□□ -1.65
YFL040W	YFL040W	YHR033W	P38690	423 aa		4.74	□□□□□ -1.65
YFL040W	YFL040W	YHL017W	P38745	532 aa		4.74	□□□□□ -1.65
YFL040W	YFL040W	SLI1	P53304	468 aa		4.74	□□□□□ -1.65
YFL040W	YFL040W	YAP1802	P53309	568 aa		4.74	□□□□□ -1.65
YFL040W	YFL040W	MUK1	Q02866	612 aa		4.74	□□□□□ -1.65
YFL040W	YFL040W	OMS1	Q06668	471 aa		4.74	□□□□□ -1.65
YFL040W	YFL040W	CWC2	Q12046	339 aa	Predicted RBP	4.74	□□□□□ -1.65
YFL040W	YFL040W	CHS5	Q12114	671 aa	Known RBP	4.74	□□□□□ -1.65
YFL040W	YFL040W	ACF2	Q12168	779 aa		4.74	□□□□□ -1.65
YFL040W	YFL040W	SKI3	P17883	1432 aa	Known RBP	4.74	□□□□□ -1.65
YFL040W	YFL040W	EXO84	P38261	753 aa		4.73	□□□□□ -1.65
YFL040W	YFL040W	YHL041W	P38730	149 aa		4.73	□□□□□ -1.65
YFL040W	YFL040W	RFX1	P48743	811 aa		4.73	□□□□□ -1.65
YFL040W	YFL040W	CTF4	Q01454	927 aa		4.73	□□□□□ -1.65
YFL040W	YFL040W	TMA64	Q04600	565 aa	Known RBP	4.73	□□□□□ -1.65
YFL040W	YFL040W	MLH3	Q12083	715 aa		4.73	□□□□□ -1.65
YFL040W	YFL040W	YEL076C-A	P0CX16	216 aa		4.72	□□□□□ -1.65
YFL040W	YFL040W	YLR464W	P0CX17	216 aa		4.72	□□□□□ -1.65
YFL040W	YFL040W	YKL133C	P36066	463 aa		4.72	□□□□□ -1.65
YFL040W	YFL040W	CDS1	P38221	457 aa		4.72	□□□□□ -1.65
YFL040W	YFL040W	RIM4	P38741	713 aa		4.72	□□□□□ -1.65
YFL040W	YFL040W	PCL5	P38794	229 aa		4.72	□□□□□ -1.65
YFL040W	YFL040W	YEL076C	P39971	216 aa		4.72	□□□□□ -1.65
YFL040W	YFL040W	PRM2	P40534	656 aa		4.72	□□□□□ -1.65
YFL040W	YFL040W	HIS6	P40545	261 aa		4.72	□□□□□ -1.65
YFL040W	YFL040W	HOL1	P53389	586 aa		4.72	□□□□□ -1.65
YFL040W	YFL040W	SPO1	P53541	631 aa		4.72	□□□□□ -1.65
YFL040W	YFL040W	SSL2	Q00578	843 aa		4.72	□□□□□ -1.65
YFL040W	YFL040W	PNS1	Q12412	539 aa		4.72	□□□□□ -1.65
YFL040W	YFL040W	CRG1	P38892	291 aa	RIP-Chip data	4.72	□□□□□ -1.65	not detected
YFL040W	YFL040W	EAF5	P39995	279 aa		4.72	□□□□□ -1.65
YFL040W	YFL040W	VID27	P40157	782 aa		4.72	□□□□□ -1.65
YFL040W	YFL040W	STB4	P50104	949 aa		4.72	□□□□□ -1.65
YFL040W	YFL040W	MSS18	P08593	268 aa		4.71	□□□□□ -1.66
YFL040W	YFL040W	THR1	P17423	357 aa	Known RBP	4.71	□□□□□ -1.66
YFL040W	YFL040W	MSS1	P32559	526 aa	Predicted RBP	4.71	□□□□□ -1.66
YFL040W	YFL040W	MTC7	P32633	139 aa		4.71	□□□□□ -1.66
YFL040W	YFL040W	MRS6	P32864	603 aa	Known RBP	4.71	□□□□□ -1.66
YFL040W	YFL040W	CBR1	P38626	284 aa	Known RBP	4.71	□□□□□ -1.66
YFL040W	YFL040W	MPS3	P47069	682 aa		4.71	□□□□□ -1.66
YFL040W	YFL040W	DBF20	P32328	564 aa		4.7	□□□□□ -1.66
YFL040W	YFL040W	ERP2	P39704	215 aa		4.7	□□□□□ -1.66
YFL040W	YFL040W	STL1	P39932	569 aa		4.7	□□□□□ -1.66
YFL040W	YFL040W	FTR1	P40088	404 aa		4.7	□□□□□ -1.66
YFL040W	YFL040W	KHA1	P40309	873 aa		4.7	□□□□□ -1.66
YFL040W	YFL040W	TIM44	Q01852	431 aa		4.7	□□□□□ -1.66
YFL040W	YFL040W	MTD1	Q02046	320 aa	Known RBP	4.7	□□□□□ -1.66
YFL040W	YFL040W	USV1	Q12132	391 aa		4.7	□□□□□ -1.66
YFL040W	YFL040W	SSK2	P53599	1579 aa		4.69	□□□□□ -1.66
YFL040W	YFL040W	NTH1	P32356	751 aa		4.69	□□□□□ -1.66
YFL040W	YFL040W	RMA1	P36001	430 aa	Known RBP	4.69	□□□□□ -1.66
YFL040W	YFL040W	CTP1	P38152	299 aa		4.69	□□□□□ -1.66
YFL040W	YFL040W	MOH1	P38191	138 aa		4.69	□□□□□ -1.66
YFL040W	YFL040W	QRI7	P43122	407 aa		4.69	□□□□□ -1.66
YFL040W	YFL040W	PEF1	P53238	335 aa		4.69	□□□□□ -1.66
YFL040W	YFL040W	ATG4	P53867	494 aa		4.69	□□□□□ -1.66
YFL040W	YFL040W	SMX3	P54999	86 aa	Predicted RBP	4.69	□□□□□ -1.66
YFL040W	YFL040W	CEG1	Q01159	459 aa	Predicted RBP	4.69	□□□□□ -1.66
YFL040W	YFL040W	FDC1	Q03034	503 aa		4.69	□□□□□ -1.66
YFL040W	YFL040W	MCH5	Q08777	521 aa		4.69	□□□□□ -1.66
YFL040W	YFL040W	HMG2	P12684	1045 aa		4.68	□□□□□ -1.66
YFL040W	YFL040W	TUP1	P16649	713 aa		4.68	□□□□□ -1.66
YFL040W	YFL040W	PTH2	P34222	208 aa		4.68	□□□□□ -1.66
YFL040W	YFL040W	OAR1	P35731	278 aa		4.68	□□□□□ -1.66
YFL040W	YFL040W	YIL092W	P40497	633 aa		4.68	□□□□□ -1.66
YFL040W	YFL040W	CNM67	P53865	581 aa	Known RBP	4.68	□□□□□ -1.66
YFL040W	YFL040W	SQS1	P53866	767 aa	Known RBP	4.68	□□□□□ -1.66
YFL040W	YFL040W	COG4	Q06096	861 aa		4.68	□□□□□ -1.66
YFL040W	YFL040W	HBT1	Q07653	1046 aa	Known RBP	4.68	□□□□□ -1.66
YFL040W	YFL040W	YOL114C	Q12322	202 aa		4.68	□□□□□ -1.66
YFL040W	YFL040W	FUB1	P25659	250 aa		4.68	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 19.8 ms