RNA–Protein interactions for RNA: YER150W

SPI1, Transcript of GPI-anchored cell wall protein involved in weak acid resistance, yeast

Gene SPI1, Length 447 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPI1	YER150W	YJR039W	P47107	1121 aa		4.23	□□□□□ -1.73
SPI1	YER150W	BNA2	P47125	453 aa		4.23	□□□□□ -1.73
SPI1	YER150W	TCB2	P48231	1178 aa		4.23	□□□□□ -1.73
SPI1	YER150W	HFM1	P51979	1187 aa		4.23	□□□□□ -1.73
SPI1	YER150W	SGF73	P53165	657 aa		4.23	□□□□□ -1.73
SPI1	YER150W	CGR1	P53188	120 aa		4.23	□□□□□ -1.73
SPI1	YER150W	PRO2	P54885	456 aa	Known RBP	4.23	□□□□□ -1.73
SPI1	YER150W	RPT6	Q01939	405 aa	Known RBP	4.23	□□□□□ -1.73
SPI1	YER150W	HOS3	Q02959	697 aa	Known RBP	4.23	□□□□□ -1.73
SPI1	YER150W	YAP6	Q03935	383 aa		4.23	□□□□□ -1.73
SPI1	YER150W	AGE1	Q04412	482 aa		4.23	□□□□□ -1.73
SPI1	YER150W	VBA4	Q04602	768 aa	Known RBP	4.23	□□□□□ -1.73
SPI1	YER150W	AIM32	Q04689	311 aa		4.23	□□□□□ -1.73
SPI1	YER150W	MRD1	Q06106	887 aa	Known RBP	4.23	□□□□□ -1.73
SPI1	YER150W	SPH1	Q06160	661 aa		4.23	□□□□□ -1.73
SPI1	YER150W	CDC19	P00549	500 aa	Known RBP	4.22	□□□□□ -1.73
SPI1	YER150W	CLC1	P17891	233 aa		4.22	□□□□□ -1.73
SPI1	YER150W	MSN1	P22148	382 aa		4.22	□□□□□ -1.73
SPI1	YER150W	PRE8	P23639	250 aa		4.22	□□□□□ -1.73
SPI1	YER150W	VAC17	P25591	423 aa		4.22	□□□□□ -1.73
SPI1	YER150W	AAR2	P32357	355 aa	Predicted RBP	4.22	□□□□□ -1.73
SPI1	YER150W	ACP1	P32463	125 aa		4.22	□□□□□ -1.73
SPI1	YER150W	HOG1	P32485	435 aa		4.22	□□□□□ -1.73
SPI1	YER150W	SAC6	P32599	642 aa	Known RBP	4.22	□□□□□ -1.73
SPI1	YER150W	SLA1	P32790	1244 aa		4.22	□□□□□ -1.73
SPI1	YER150W	CBF5	P33322	483 aa	Known RBP RIP-Chip data	4.22	□□□□□ -1.73	not detected
SPI1	YER150W	SDS22	P36047	338 aa		4.22	□□□□□ -1.73
SPI1	YER150W	MRPL40	P36534	297 aa		4.22	□□□□□ -1.73
SPI1	YER150W	COS111	P38308	924 aa		4.22	□□□□□ -1.73
SPI1	YER150W	TDA3	P38758	523 aa		4.22	□□□□□ -1.73
SPI1	YER150W	DYS1	P38791	387 aa		4.22	□□□□□ -1.73
SPI1	YER150W	YEL025C	P39991	1188 aa		4.22	□□□□□ -1.73
SPI1	YER150W	LYS14	P40971	790 aa		4.22	□□□□□ -1.73
SPI1	YER150W	YBP2	P53169	641 aa		4.22	□□□□□ -1.73
SPI1	YER150W	YNL144C	P53907	740 aa		4.22	□□□□□ -1.73
SPI1	YER150W	MSH6	Q03834	1242 aa		4.22	□□□□□ -1.73
SPI1	YER150W	TIF35	Q04067	274 aa	Known RBP	4.22	□□□□□ -1.73
SPI1	YER150W	GIS4	Q04233	774 aa		4.22	□□□□□ -1.73
SPI1	YER150W	YDR338C	Q05497	695 aa		4.22	□□□□□ -1.73
SPI1	YER150W	KAP95	Q06142	861 aa	Known RBP	4.22	□□□□□ -1.73
SPI1	YER150W	NBA1	Q08229	501 aa	Known RBP	4.22	□□□□□ -1.73
SPI1	YER150W	GUP2	Q08929	609 aa		4.22	□□□□□ -1.73
SPI1	YER150W	TRM8	Q12009	286 aa		4.22	□□□□□ -1.73
SPI1	YER150W	TGL5	Q12043	749 aa		4.22	□□□□□ -1.73
SPI1	YER150W	DCS2	Q12123	353 aa		4.22	□□□□□ -1.73
SPI1	YER150W	HAL9	Q12180	1030 aa		4.22	□□□□□ -1.73
SPI1	YER150W	TAF3	Q12297	353 aa		4.22	□□□□□ -1.73
SPI1	YER150W	PSY3	Q12318	242 aa		4.22	□□□□□ -1.73
SPI1	YER150W	YPR071W	Q12346	211 aa		4.22	□□□□□ -1.73
SPI1	YER150W	YBL111C	Q3E7Y5	667 aa		4.22	□□□□□ -1.73
SPI1	YER150W	YIL002W-A	Q3E7Z5	69 aa		4.22	□□□□□ -1.73
SPI1	YER150W	IKI3	Q06706	1349 aa	Known RBP	4.21	□□□□□ -1.73
SPI1	YER150W	TPK1	P06244	397 aa		4.21	□□□□□ -1.74
SPI1	YER150W	BIK1	P11709	440 aa		4.21	□□□□□ -1.74
SPI1	YER150W	NCP1	P16603	691 aa	Known RBP	4.21	□□□□□ -1.74
SPI1	YER150W	PHO3	P24031	467 aa		4.21	□□□□□ -1.74
SPI1	YER150W	SPS22	P25380	463 aa		4.21	□□□□□ -1.74
SPI1	YER150W	DEP1	P31385	405 aa		4.21	□□□□□ -1.74
SPI1	YER150W	UTR2	P32623	467 aa		4.21	□□□□□ -1.74
SPI1	YER150W	KAP122	P32767	1081 aa		4.21	□□□□□ -1.74
SPI1	YER150W	SER1	P33330	395 aa	Known RBP	4.21	□□□□□ -1.74
SPI1	YER150W	GCS1	P35197	352 aa		4.21	□□□□□ -1.74
SPI1	YER150W	DAD2	P36162	133 aa		4.21	□□□□□ -1.74
SPI1	YER150W	PIK1	P39104	1066 aa		4.21	□□□□□ -1.74
SPI1	YER150W	THI6	P41835	540 aa		4.21	□□□□□ -1.74
SPI1	YER150W	YFL052W	P43551	465 aa		4.21	□□□□□ -1.74
SPI1	YER150W	LYS4	P49367	693 aa	Predicted RBP	4.21	□□□□□ -1.74
SPI1	YER150W	CTF18	P49956	741 aa		4.21	□□□□□ -1.74
SPI1	YER150W	MLC1	P53141	149 aa		4.21	□□□□□ -1.74
SPI1	YER150W	YGR054W	P53235	642 aa	Known RBP	4.21	□□□□□ -1.74
SPI1	YER150W	EGD1	Q02642	157 aa	Known RBP	4.21	□□□□□ -1.74
SPI1	YER150W	YHM2	Q04013	314 aa		4.21	□□□□□ -1.74
SPI1	YER150W	ERB1	Q04660	807 aa	Known RBP	4.21	□□□□□ -1.74
SPI1	YER150W	GTB1	Q04924	702 aa		4.21	□□□□□ -1.74
SPI1	YER150W	YLR456W	Q06199	204 aa		4.21	□□□□□ -1.74
SPI1	YER150W	ARR1	Q06596	294 aa		4.21	□□□□□ -1.74
SPI1	YER150W	YDR306C	Q06640	478 aa		4.21	□□□□□ -1.74
SPI1	YER150W	RRT8	Q08219	342 aa		4.21	□□□□□ -1.74
SPI1	YER150W	HFI1	Q12060	488 aa		4.21	□□□□□ -1.74
SPI1	YER150W	NUR1	Q12066	484 aa		4.21	□□□□□ -1.74
SPI1	YER150W	BUG1	Q12191	341 aa		4.21	□□□□□ -1.74
SPI1	YER150W	HER1	Q12276	1246 aa		4.21	□□□□□ -1.74
SPI1	YER150W	ZRT2	Q12436	422 aa		4.21	□□□□□ -1.74
SPI1	YER150W	PFK27	Q12471	397 aa	Predicted RBP	4.21	□□□□□ -1.74
SPI1	YER150W	APM4	Q99186	491 aa		4.21	□□□□□ -1.74
SPI1	YER150W	VAS1	P07806	1104 aa	Known RBP	4.2	□□□□□ -1.74
SPI1	YER150W	RPS21A	P0C0V8	87 aa	Known RBP	4.2	□□□□□ -1.74
SPI1	YER150W	HVG1	P0CE11	249 aa		4.2	□□□□□ -1.74
SPI1	YER150W	YML002W	P0CF17	737 aa		4.2	□□□□□ -1.74
SPI1	YER150W	CWH43	P25618	953 aa		4.2	□□□□□ -1.74
SPI1	YER150W	MSP1	P28737	362 aa		4.2	□□□□□ -1.74
SPI1	YER150W	MEI5	P32489	222 aa		4.2	□□□□□ -1.74
SPI1	YER150W	TAF5	P38129	798 aa		4.2	□□□□□ -1.74
SPI1	YER150W	RRM3	P38766	723 aa		4.2	□□□□□ -1.74
SPI1	YER150W	YDR089W	P38966	869 aa		4.2	□□□□□ -1.74
SPI1	YER150W	HXT6	P39003	570 aa	Known RBP	4.2	□□□□□ -1.74
SPI1	YER150W	HXT7	P39004	570 aa		4.2	□□□□□ -1.74
SPI1	YER150W	PUG1	P40100	303 aa		4.2	□□□□□ -1.74
SPI1	YER150W	PSF2	P40359	213 aa		4.2	□□□□□ -1.74
SPI1	YER150W	YIL092W	P40497	633 aa		4.2	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 16.6 ms