RNA–Protein interactions for RNA: YER052C

HOM3, Transcript of Aspartate kinase (L-aspartate 4-P-transferase), yeast

Gene HOM3, Length 1,584 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HOM3	YER052C	TAF3	Q12297	353 aa		4.7	□□□□□ -1.66
HOM3	YER052C	SRB8	P25648	1427 aa		4.69	□□□□□ -1.66
HOM3	YER052C	CTT1	P06115	562 aa		4.69	□□□□□ -1.66
HOM3	YER052C	MSD1	P15179	658 aa	Known RBP	4.69	□□□□□ -1.66
HOM3	YER052C	OM45	P16547	393 aa		4.69	□□□□□ -1.66
HOM3	YER052C	TRK2	P28584	889 aa		4.69	□□□□□ -1.66
HOM3	YER052C	CDC12	P32468	407 aa	Known RBP	4.69	□□□□□ -1.66
HOM3	YER052C	MRP4	P32902	394 aa		4.69	□□□□□ -1.66
HOM3	YER052C	UIP5	P36137	443 aa		4.69	□□□□□ -1.66
HOM3	YER052C	UGA2	P38067	497 aa		4.69	□□□□□ -1.66
HOM3	YER052C	CCZ1	P38273	704 aa		4.69	□□□□□ -1.66
HOM3	YER052C	MCX1	P38323	520 aa	Predicted RBP	4.69	□□□□□ -1.66
HOM3	YER052C	DED81	P38707	554 aa	Known RBP	4.69	□□□□□ -1.66
HOM3	YER052C	SMC2	P38989	1170 aa	Known RBP	4.69	□□□□□ -1.66
HOM3	YER052C	MDE1	P47095	244 aa		4.69	□□□□□ -1.66
HOM3	YER052C	SHE4	P51534	789 aa		4.69	□□□□□ -1.66
HOM3	YER052C	TFB2	Q02939	513 aa		4.69	□□□□□ -1.66
HOM3	YER052C	VPS30	Q02948	557 aa		4.69	□□□□□ -1.66
HOM3	YER052C	UME1	Q03010	460 aa		4.69	□□□□□ -1.66
HOM3	YER052C	FDC1	Q03034	503 aa		4.69	□□□□□ -1.66
HOM3	YER052C	PRP42	Q03776	544 aa	Known RBP	4.69	□□□□□ -1.66
HOM3	YER052C	PHO92	Q06390	306 aa		4.69	□□□□□ -1.66
HOM3	YER052C	TSR1	Q07381	788 aa	Known RBP	4.69	□□□□□ -1.66
HOM3	YER052C	THI72	Q08579	599 aa		4.69	□□□□□ -1.66
HOM3	YER052C	TRE2	Q08693	809 aa		4.69	□□□□□ -1.66
HOM3	YER052C	HAP1	P0CE41	1502 aa		4.68	□□□□□ -1.66
HOM3	YER052C	APA1	P16550	321 aa	Known RBP	4.68	□□□□□ -1.66
HOM3	YER052C	LCB1	P25045	558 aa	Known RBP	4.68	□□□□□ -1.66
HOM3	YER052C	HSP104	P31539	908 aa	Known RBP	4.68	□□□□□ -1.66
HOM3	YER052C	DBF4	P32325	704 aa		4.68	□□□□□ -1.66
HOM3	YER052C	PLC1	P32383	869 aa		4.68	□□□□□ -1.66
HOM3	YER052C	SSE1	P32589	693 aa	Known RBP	4.68	□□□□□ -1.66
HOM3	YER052C	SLA2	P33338	968 aa		4.68	□□□□□ -1.66
HOM3	YER052C	YKT6	P36015	200 aa	Known RBP	4.68	□□□□□ -1.66
HOM3	YER052C	SET3	P36124	751 aa		4.68	□□□□□ -1.66
HOM3	YER052C	ECM4	P36156	370 aa		4.68	□□□□□ -1.66
HOM3	YER052C	TYS1	P36421	394 aa	Known RBP	4.68	□□□□□ -1.66
HOM3	YER052C	UBS1	P38290	277 aa		4.68	□□□□□ -1.66
HOM3	YER052C	DSS1	P39112	969 aa		4.68	□□□□□ -1.66
HOM3	YER052C	TMN3	P40071	706 aa		4.68	□□□□□ -1.66
HOM3	YER052C	ALG2	P43636	503 aa		4.68	□□□□□ -1.66
HOM3	YER052C	LSB1	P53281	241 aa		4.68	□□□□□ -1.66
HOM3	YER052C	INP2	Q03824	705 aa		4.68	□□□□□ -1.66
HOM3	YER052C	CUE5	Q08412	411 aa	Known RBP	4.68	□□□□□ -1.66
HOM3	YER052C	YOR059C	Q08448	450 aa	Known RBP	4.68	□□□□□ -1.66
HOM3	YER052C	YLL058W	Q12198	575 aa		4.68	□□□□□ -1.66
HOM3	YER052C	TY1B-NL2	Q99337	1749 aa	Known RBP	4.67	□□□□□ -1.66
HOM3	YER052C	PET494	P07390	489 aa	Predicted RBP	4.67	□□□□□ -1.66
HOM3	YER052C	PUT4	P15380	627 aa		4.67	□□□□□ -1.66
HOM3	YER052C	FAR1	P21268	830 aa		4.67	□□□□□ -1.66
HOM3	YER052C	RAD53	P22216	821 aa		4.67	□□□□□ -1.66
HOM3	YER052C	RPN2	P32565	945 aa	Known RBP	4.67	□□□□□ -1.66
HOM3	YER052C	REC104	P33323	182 aa		4.67	□□□□□ -1.66
HOM3	YER052C	TFC4	P33339	1025 aa		4.67	□□□□□ -1.66
HOM3	YER052C	HSP78	P33416	811 aa		4.67	□□□□□ -1.66
HOM3	YER052C	NIC96	P34077	839 aa		4.67	□□□□□ -1.66
HOM3	YER052C	DHR2	P36009	735 aa	Predicted RBP	4.67	□□□□□ -1.66
HOM3	YER052C	TAF5	P38129	798 aa		4.67	□□□□□ -1.66
HOM3	YER052C	OPY1	P38271	328 aa		4.67	□□□□□ -1.66
HOM3	YER052C	YHL012W	P38709	493 aa		4.67	□□□□□ -1.66
HOM3	YER052C	VPS45	P38932	577 aa		4.67	□□□□□ -1.66
HOM3	YER052C	STN1	P38960	494 aa		4.67	□□□□□ -1.66
HOM3	YER052C	PIK1	P39104	1066 aa		4.67	□□□□□ -1.66
HOM3	YER052C	YHB1	P39676	399 aa	Known RBP	4.67	□□□□□ -1.66
HOM3	YER052C	MMM1	P41800	426 aa		4.67	□□□□□ -1.66
HOM3	YER052C	ARI1	P53111	347 aa	Known RBP	4.67	□□□□□ -1.66
HOM3	YER052C	TRS130	Q03660	1102 aa		4.67	□□□□□ -1.66
HOM3	YER052C	YKU80	Q04437	629 aa		4.67	□□□□□ -1.66
HOM3	YER052C	NNT1	Q05874	261 aa		4.67	□□□□□ -1.66
HOM3	YER052C	CRN1	Q06440	651 aa		4.67	□□□□□ -1.66
HOM3	YER052C	TDA6	Q06466	467 aa		4.67	□□□□□ -1.66
HOM3	YER052C	MLC2	Q06580	163 aa		4.67	□□□□□ -1.66
HOM3	YER052C	THI73	Q07904	523 aa		4.67	□□□□□ -1.66
HOM3	YER052C	NBA1	Q08229	501 aa	Known RBP	4.67	□□□□□ -1.66
HOM3	YER052C	RSB1	Q08417	382 aa		4.67	□□□□□ -1.66
HOM3	YER052C	MDM12	Q92328	271 aa		4.67	□□□□□ -1.66
HOM3	YER052C	IML1	P47170	1584 aa		4.67	□□□□□ -1.66
HOM3	YER052C	PHR1	P05066	565 aa	Known RBP RIP-Chip data	4.66	□□□□□ -1.66	not detected
HOM3	YER052C	SNF5	P18480	905 aa		4.66	□□□□□ -1.66
HOM3	YER052C	PRP28	P23394	588 aa		4.66	□□□□□ -1.66
HOM3	YER052C	CDC48	P25694	835 aa	Known RBP	4.66	□□□□□ -1.66
HOM3	YER052C	PSO2	P30620	661 aa		4.66	□□□□□ -1.66
HOM3	YER052C	ASF2	P32448	525 aa	Predicted RBP	4.66	□□□□□ -1.66
HOM3	YER052C	AFR1	P33304	620 aa		4.66	□□□□□ -1.66
HOM3	YER052C	MDL2	P33311	773 aa		4.66	□□□□□ -1.66
HOM3	YER052C	BMH2	P34730	273 aa	Known RBP	4.66	□□□□□ -1.66
HOM3	YER052C	BAP2	P38084	609 aa		4.66	□□□□□ -1.66
HOM3	YER052C	YSW1	P38280	609 aa		4.66	□□□□□ -1.66
HOM3	YER052C	CCT7	P42943	550 aa	Known RBP	4.66	□□□□□ -1.66
HOM3	YER052C	MAL11	P53048	616 aa		4.66	□□□□□ -1.66
HOM3	YER052C	NCS6	P53088	359 aa		4.66	□□□□□ -1.66
HOM3	YER052C	RBG2	P53295	368 aa	Known RBP	4.66	□□□□□ -1.66
HOM3	YER052C	LSC1	P53598	329 aa	Known RBP	4.66	□□□□□ -1.66
HOM3	YER052C	MRPL19	P53875	158 aa		4.66	□□□□□ -1.66
HOM3	YER052C	ERV25	P54837	211 aa	Known RBP	4.66	□□□□□ -1.66
HOM3	YER052C	TIM50	Q02776	476 aa		4.66	□□□□□ -1.66
HOM3	YER052C	HOT1	Q03213	719 aa		4.66	□□□□□ -1.66
HOM3	YER052C	VPS20	Q04272	221 aa		4.66	□□□□□ -1.66
HOM3	YER052C	NUP188	P52593	1655 aa	Known RBP	4.66	□□□□□ -1.66
HOM3	YER052C	SRP54	P20424	541 aa	Known RBP	4.65	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 18.3 ms