RNA–Protein interactions for RNA: YDR379C-A

SDH6, Transcript of Mitochondrial protein involved in assembly of succinate dehydrogenase, yeastyeast

Gene SDH6, Length 240 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDH6YDR379C-A BSC6Q08280 497 aa1.64□□□□□ -2.15
SDH6YDR379C-A DSE3Q08729 430 aa1.64□□□□□ -2.15
SDH6YDR379C-A REV1P12689 985 aa1.63□□□□□ -2.15
SDH6YDR379C-A COQ6P53318 479 aa1.63□□□□□ -2.15
SDH6YDR379C-A ATP25Q03153 612 aa1.63□□□□□ -2.15
SDH6YDR379C-A ADD37Q03233 198 aa1.63□□□□□ -2.15
SDH6YDR379C-A FMP25Q08023 583 aa1.63□□□□□ -2.15
SDH6YDR379C-A Q0142Q9ZZW4 58 aa1.63□□□□□ -2.15
SDH6YDR379C-A COS111P38308 924 aa1.62□□□□□ -2.15
SDH6YDR379C-A SAD1P43589 448 aa1.62□□□□□ -2.15
SDH6YDR379C-A IRC7P43623 340 aa1.62□□□□□ -2.15
SDH6YDR379C-A YNL018CP53976 612 aa1.62□□□□□ -2.15
SDH6YDR379C-A YPL071CQ02864 156 aa1.62□□□□□ -2.15
SDH6YDR379C-A SEC15P22224 910 aa1.61□□□□□ -2.15
SDH6YDR379C-A PPZ1P26570 692 aa1.61□□□□□ -2.15
SDH6YDR379C-A SRP40P32583 406 aaPredicted RBP1.61□□□□□ -2.15
SDH6YDR379C-A SPF1P39986 1215 aaKnown RBP1.61□□□□□ -2.15
SDH6YDR379C-A MAD1P40957 749 aa1.61□□□□□ -2.15
SDH6YDR379C-A YMR034CQ05131 434 aaPredicted RBP1.61□□□□□ -2.15
SDH6YDR379C-A YDL073WQ07454 984 aa1.61□□□□□ -2.15
SDH6YDR379C-A POM34Q12445 299 aa1.61□□□□□ -2.15
SDH6YDR379C-A TIF3P34167 436 aaKnown RBP1.6□□□□□ -2.15
SDH6YDR379C-A YFL015CP43578 164 aa1.6□□□□□ -2.15
SDH6YDR379C-A YIP4P53093 235 aa1.6□□□□□ -2.15
SDH6YDR379C-A SPN1Q06505 410 aaPredicted RBP1.6□□□□□ -2.15
SDH6YDR379C-A WHI2P12611 486 aa1.59□□□□□ -2.15
SDH6YDR379C-A RPT3P33298 428 aaKnown RBP1.59□□□□□ -2.15
SDH6YDR379C-A ALG2P43636 503 aa1.59□□□□□ -2.15
SDH6YDR379C-A TDA5Q06417 326 aaKnown RBP1.59□□□□□ -2.15
SDH6YDR379C-A PIN2Q12057 282 aa1.59□□□□□ -2.15
SDH6YDR379C-A ATX2Q12067 313 aa1.59□□□□□ -2.15
SDH6YDR379C-A COQ3P27680 312 aa1.58□□□□□ -2.16
SDH6YDR379C-A NPY1P53164 384 aa1.58□□□□□ -2.16
SDH6YDR379C-A TOM70P07213 617 aaKnown RBP1.57□□□□□ -2.16
SDH6YDR379C-A ARE1P25628 610 aa1.57□□□□□ -2.16
SDH6YDR379C-A ASF1P32447 279 aa1.57□□□□□ -2.16
SDH6YDR379C-A YIL092WP40497 633 aa1.57□□□□□ -2.16
SDH6YDR379C-A SAE2P46946 345 aa1.57□□□□□ -2.16
SDH6YDR379C-A TY4A-JP47023 414 aa1.57□□□□□ -2.16
SDH6YDR379C-A SHE10P53075 577 aa1.57□□□□□ -2.16
SDH6YDR379C-A ERP6P53198 216 aa1.57□□□□□ -2.16
SDH6YDR379C-A IMP4P53941 290 aaKnown RBP1.57□□□□□ -2.16
SDH6YDR379C-A MFM1Q02783 413 aa1.57□□□□□ -2.16
SDH6YDR379C-A MLH2Q07980 695 aa1.57□□□□□ -2.16
SDH6YDR379C-A TIP41Q12199 356 aa1.57□□□□□ -2.16
SDH6YDR379C-A ACO1P19414 778 aaKnown RBP RIP-Chip data1.56□□□□□ -2.16not detected
SDH6YDR379C-A ROK1P45818 564 aaPredicted RBP1.56□□□□□ -2.16
SDH6YDR379C-A LEE1Q02799 301 aaKnown RBP1.56□□□□□ -2.16
SDH6YDR379C-A RPN7Q06103 429 aaKnown RBP1.56□□□□□ -2.16
SDH6YDR379C-A CNE1P27825 502 aa1.55□□□□□ -2.16
SDH6YDR379C-A RPL8BP29453 256 aaKnown RBP1.55□□□□□ -2.16
SDH6YDR379C-A MRPL4P36517 319 aa1.55□□□□□ -2.16
SDH6YDR379C-A SCO2P38072 301 aa1.55□□□□□ -2.16
SDH6YDR379C-A APN2P38207 520 aa1.55□□□□□ -2.16
SDH6YDR379C-A UBP7P40453 1071 aa1.55□□□□□ -2.16
SDH6YDR379C-A GFD1Q04839 188 aaKnown RBP1.55□□□□□ -2.16
SDH6YDR379C-A SVF1Q05515 481 aa1.55□□□□□ -2.16
SDH6YDR379C-A BI2P03873 423 aa1.54□□□□□ -2.16
SDH6YDR379C-A HEM3P28789 327 aa1.54□□□□□ -2.16
SDH6YDR379C-A RRT2P38332 387 aa1.54□□□□□ -2.16
SDH6YDR379C-A YPL216WQ08964 1102 aa1.54□□□□□ -2.16
SDH6YDR379C-A KIN82P25341 720 aa1.53□□□□□ -2.16
SDH6YDR379C-A PPE1P38796 400 aa1.53□□□□□ -2.16
SDH6YDR379C-A TDA10P42938 290 aa1.53□□□□□ -2.16
SDH6YDR379C-A SET2P46995 733 aaKnown RBP1.53□□□□□ -2.16
SDH6YDR379C-A PCL10P53124 433 aa1.53□□□□□ -2.16
SDH6YDR379C-A BUD17P53727 317 aa1.53□□□□□ -2.16
SDH6YDR379C-A STP4Q07351 490 aa1.53□□□□□ -2.16
SDH6YDR379C-A SPO75Q07798 868 aa1.53□□□□□ -2.16
SDH6YDR379C-A ISA1Q07821 250 aaPredicted RBP1.53□□□□□ -2.16
SDH6YDR379C-A CSR2Q12734 1121 aa1.53□□□□□ -2.16
SDH6YDR379C-A RNR3P21672 869 aaKnown RBP1.52□□□□□ -2.17
SDH6YDR379C-A YKR051WP36142 418 aa1.52□□□□□ -2.17
SDH6YDR379C-A ARP4P80428 489 aa1.52□□□□□ -2.17
SDH6YDR379C-A NAN1Q02931 896 aaKnown RBP1.52□□□□□ -2.17
SDH6YDR379C-A WAR1Q03631 944 aa1.52□□□□□ -2.17
SDH6YDR379C-A YDL124WQ07551 312 aaKnown RBP1.52□□□□□ -2.17
SDH6YDR379C-A YEL068CP39977 110 aa1.51□□□□□ -2.17
SDH6YDR379C-A BIT61P47041 543 aa1.51□□□□□ -2.17
SDH6YDR379C-A YKR018CP36114 725 aa1.5□□□□□ -2.17
SDH6YDR379C-A RPN10P38886 268 aaKnown RBP1.5□□□□□ -2.17
SDH6YDR379C-A TMN3P40071 706 aa1.5□□□□□ -2.17
SDH6YDR379C-A DIG1Q03063 452 aaKnown RBP1.5□□□□□ -2.17
SDH6YDR379C-A HRD3Q05787 833 aa1.5□□□□□ -2.17
SDH6YDR379C-A YLR352WQ06479 807 aa1.5□□□□□ -2.17
SDH6YDR379C-A YFL068WP0CX99 160 aa1.49□□□□□ -2.17
SDH6YDR379C-A YLL066W-AP0CY00 160 aa1.49□□□□□ -2.17
SDH6YDR379C-A YLL067W-AP0CY01 160 aa1.49□□□□□ -2.17
SDH6YDR379C-A YPT7P32939 208 aa1.49□□□□□ -2.17
SDH6YDR379C-A SPO1P53541 631 aa1.49□□□□□ -2.17
SDH6YDR379C-A EFR3Q03653 782 aaKnown RBP1.49□□□□□ -2.17
SDH6YDR379C-A GAL4P04386 881 aa1.48□□□□□ -2.17
SDH6YDR379C-A NAP1P25293 417 aaKnown RBP1.48□□□□□ -2.17
SDH6YDR379C-A LOT5P34234 306 aa1.48□□□□□ -2.17
SDH6YDR379C-A TOM71P38825 639 aaKnown RBP1.48□□□□□ -2.17
SDH6YDR379C-A MKT1P40850 830 aaKnown RBP1.48□□□□□ -2.17
SDH6YDR379C-A BET4Q00618 327 aa1.48□□□□□ -2.17
SDH6YDR379C-A CEF1Q03654 590 aaPredicted RBP1.48□□□□□ -2.17
SDH6YDR379C-A SNU56Q03782 492 aaKnown RBP1.48□□□□□ -2.17
SDH6YDR379C-A OSH2Q12451 1283 aa1.48□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 67 ms