RNA–Protein interactions for RNA: YDR358W

GGA1, Transcript of Golgi-localized protein with homology to gamma-adaptin, yeast

Gene GGA1, Length 1,674 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GGA1	YDR358W	RSC1	P53236	928 aa		5.08	□□□□□ -1.6
GGA1	YDR358W	RCF1	Q03713	159 aa		5.08	□□□□□ -1.6
GGA1	YDR358W	PPN1	Q04119	674 aa		5.08	□□□□□ -1.6
GGA1	YDR358W	ARA2	Q04212	335 aa		5.08	□□□□□ -1.6
GGA1	YDR358W	STP4	Q07351	490 aa		5.08	□□□□□ -1.6
GGA1	YDR358W	TRM8	Q12009	286 aa		5.08	□□□□□ -1.6
GGA1	YDR358W	HSH49	Q99181	213 aa	Predicted RBP	5.08	□□□□□ -1.6
GGA1	YDR358W	CDC60	P26637	1090 aa	Known RBP	5.07	□□□□□ -1.6
GGA1	YDR358W	CBF2	P32504	956 aa		5.07	□□□□□ -1.6
GGA1	YDR358W	TEF4	P36008	412 aa	Known RBP	5.07	□□□□□ -1.6
GGA1	YDR358W	NOP4	P37838	685 aa	Known RBP	5.07	□□□□□ -1.6
GGA1	YDR358W	SAK1	P38990	1142 aa		5.07	□□□□□ -1.6
GGA1	YDR358W	GID8	P40208	455 aa		5.07	□□□□□ -1.6
GGA1	YDR358W	PRM2	P40534	656 aa		5.07	□□□□□ -1.6
GGA1	YDR358W	IRC6	P43615	237 aa		5.07	□□□□□ -1.6
GGA1	YDR358W	TAF4	P50105	388 aa		5.07	□□□□□ -1.6
GGA1	YDR358W	YNR071C	P53757	342 aa		5.07	□□□□□ -1.6
GGA1	YDR358W	TFC6	Q06339	672 aa		5.07	□□□□□ -1.6
GGA1	YDR358W	CRD1	Q07560	283 aa		5.07	□□□□□ -1.6
GGA1	YDR358W	AAD4	Q07747	329 aa		5.07	□□□□□ -1.6
GGA1	YDR358W	HOS1	Q12214	470 aa		5.07	□□□□□ -1.6
GGA1	YDR358W	HSP82	P02829	709 aa	Known RBP	5.06	□□□□□ -1.6
GGA1	YDR358W	BET2	P20133	325 aa		5.06	□□□□□ -1.6
GGA1	YDR358W	LIP5	P32875	414 aa		5.06	□□□□□ -1.6
GGA1	YDR358W	IFA38	P38286	347 aa		5.06	□□□□□ -1.6
GGA1	YDR358W	YHR033W	P38690	423 aa		5.06	□□□□□ -1.6
GGA1	YDR358W	KHA1	P40309	873 aa		5.06	□□□□□ -1.6
GGA1	YDR358W	PXA1	P41909	870 aa		5.06	□□□□□ -1.6
GGA1	YDR358W	PEF1	P53238	335 aa		5.06	□□□□□ -1.6
GGA1	YDR358W	TAF11	Q04226	346 aa		5.06	□□□□□ -1.6
GGA1	YDR358W	HIF1	Q12373	385 aa		5.06	□□□□□ -1.6
GGA1	YDR358W	ATG11	Q12527	1178 aa		5.06	□□□□□ -1.6
GGA1	YDR358W	PYC1	P11154	1178 aa	Known RBP	5.05	□□□□□ -1.6
GGA1	YDR358W	FRS1	P15624	595 aa	Known RBP	5.05	□□□□□ -1.6
GGA1	YDR358W	MET8	P15807	274 aa		5.05	□□□□□ -1.6
GGA1	YDR358W	VMA8	P32610	256 aa	Known RBP	5.05	□□□□□ -1.6
GGA1	YDR358W	DHR2	P36009	735 aa	Predicted RBP	5.05	□□□□□ -1.6
GGA1	YDR358W	GPD2	P41911	440 aa	Known RBP	5.05	□□□□□ -1.6
GGA1	YDR358W	YAP1802	P53309	568 aa		5.05	□□□□□ -1.6
GGA1	YDR358W	SQS1	P53866	767 aa	Known RBP	5.05	□□□□□ -1.6
GGA1	YDR358W	REC102	Q02721	264 aa		5.05	□□□□□ -1.6
GGA1	YDR358W	FCP1	Q03254	732 aa		5.05	□□□□□ -1.6
GGA1	YDR358W	YKU80	Q04437	629 aa		5.05	□□□□□ -1.6
GGA1	YDR358W	RRG1	Q12167	365 aa	Predicted RBP	5.05	□□□□□ -1.6
GGA1	YDR358W	RPP2A	P05319	106 aa	Known RBP	5.05	□□□□□ -1.6
GGA1	YDR358W	PCK1	P10963	549 aa		5.05	□□□□□ -1.6
GGA1	YDR358W	PRP22	P24384	1145 aa	Known RBP	5.05	□□□□□ -1.6
GGA1	YDR358W	NPL6	P32832	435 aa		5.05	□□□□□ -1.6
GGA1	YDR358W	CNS1	P33313	385 aa		5.05	□□□□□ -1.6
GGA1	YDR358W	APT2	P36973	181 aa		5.05	□□□□□ -1.6
GGA1	YDR358W	YBR138C	P38277	524 aa		5.05	□□□□□ -1.6
GGA1	YDR358W	SYF1	Q04048	859 aa	Predicted RBP	5.05	□□□□□ -1.6
GGA1	YDR358W	GPR1	Q12361	961 aa		5.05	□□□□□ -1.6
GGA1	YDR358W	ZRT2	Q12436	422 aa		5.05	□□□□□ -1.6
GGA1	YDR358W	SPE1	P08432	466 aa		5.04	□□□□□ -1.6
GGA1	YDR358W	IME1	P21190	360 aa		5.04	□□□□□ -1.6
GGA1	YDR358W	PFA3	P42836	336 aa		5.04	□□□□□ -1.6
GGA1	YDR358W	PRP31	P49704	494 aa	Predicted RBP	5.04	□□□□□ -1.6
GGA1	YDR358W	IMA1	P53051	589 aa		5.04	□□□□□ -1.6
GGA1	YDR358W	RRT6	P53117	311 aa	Predicted RBP	5.04	□□□□□ -1.6
GGA1	YDR358W	MDR1	P53258	950 aa		5.04	□□□□□ -1.6
GGA1	YDR358W	BSC5	P53755	489 aa		5.04	□□□□□ -1.6
GGA1	YDR358W	MUS81	Q04149	632 aa	Predicted RBP	5.04	□□□□□ -1.6
GGA1	YDR358W	VBA4	Q04602	768 aa	Known RBP	5.04	□□□□□ -1.6
GGA1	YDR358W	SGO1	Q08490	590 aa		5.04	□□□□□ -1.6
GGA1	YDR358W	RIT1	P23796	513 aa		5.03	□□□□□ -1.6
GGA1	YDR358W	ETP1	P38748	585 aa	Known RBP	5.03	□□□□□ -1.6
GGA1	YDR358W	FSH1	P38777	243 aa	Known RBP	5.03	□□□□□ -1.6
GGA1	YDR358W	BUD8	P41698	603 aa		5.03	□□□□□ -1.6
GGA1	YDR358W	FOL2	P51601	243 aa	Known RBP	5.03	□□□□□ -1.6
GGA1	YDR358W	ARG5,6	Q01217	863 aa		5.03	□□□□□ -1.6
GGA1	YDR358W	SNO4	Q04902	237 aa		5.03	□□□□□ -1.6
GGA1	YDR358W	ASM4	Q05166	528 aa		5.03	□□□□□ -1.6
GGA1	YDR358W	MCM21	Q06675	368 aa		5.03	□□□□□ -1.6
GGA1	YDR358W	HSP33	Q08914	237 aa	Known RBP	5.03	□□□□□ -1.6
GGA1	YDR358W	HSP32	Q08992	237 aa		5.03	□□□□□ -1.6
GGA1	YDR358W	NBP2	Q12163	236 aa		5.03	□□□□□ -1.6
GGA1	YDR358W	RVB2	Q12464	471 aa	Known RBP	5.03	□□□□□ -1.6
GGA1	YDR358W	DFG16	Q99234	619 aa		5.03	□□□□□ -1.6
GGA1	YDR358W	ADE3	P07245	946 aa	Known RBP	5.02	□□□□□ -1.61
GGA1	YDR358W	ERG20	P08524	352 aa	Known RBP	5.02	□□□□□ -1.61
GGA1	YDR358W	SPO16	P17122	198 aa		5.02	□□□□□ -1.61
GGA1	YDR358W	SED4	P25365	1065 aa		5.02	□□□□□ -1.61
GGA1	YDR358W	FRD1	P32614	470 aa	Known RBP	5.02	□□□□□ -1.61
GGA1	YDR358W	POL12	P38121	705 aa	Predicted RBP	5.02	□□□□□ -1.61
GGA1	YDR358W	YBR259W	P38338	688 aa		5.02	□□□□□ -1.61
GGA1	YDR358W	CAB2	P40506	365 aa		5.02	□□□□□ -1.61
GGA1	YDR358W	MND2	P40577	368 aa		5.02	□□□□□ -1.61
GGA1	YDR358W	ARF3	P40994	183 aa	RIP-Chip data	5.02	□□□□□ -1.61	not detected
GGA1	YDR358W	CIR1	P42940	261 aa		5.02	□□□□□ -1.61
GGA1	YDR358W	TEL2	P53038	688 aa		5.02	□□□□□ -1.61
GGA1	YDR358W	ERO1	Q03103	563 aa		5.02	□□□□□ -1.61
GGA1	YDR358W	RCR2	Q03446	210 aa	Known RBP	5.02	□□□□□ -1.61
GGA1	YDR358W	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	5.02	□□□□□ -1.61	not detected
GGA1	YDR358W	SFI1	Q12369	946 aa		5.02	□□□□□ -1.61
GGA1	YDR358W	SKM1	Q12469	655 aa		5.02	□□□□□ -1.61
GGA1	YDR358W	GLT1	Q12680	2145 aa	Known RBP	5.02	□□□□□ -1.61
GGA1	YDR358W	TUF1	P02992	437 aa	Known RBP	5.02	□□□□□ -1.61
GGA1	YDR358W	URA3	P03962	267 aa		5.02	□□□□□ -1.61
GGA1	YDR358W	BIK1	P11709	440 aa		5.02	□□□□□ -1.61

Retrieved 100 of 5,963 RNA–protein pairs in 16.7 ms