RNA–Protein interactions for RNA: YDR308C

SRB7, Transcript of Subunit of the RNA polymerase II mediator complex, yeast

Gene SRB7, Length 423 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SRB7	YDR308C	SPO11	P23179	398 aa		4.59	□□□□□ -1.67
SRB7	YDR308C	MRC1	P25588	1096 aa		4.59	□□□□□ -1.67
SRB7	YDR308C	HXT4	P32467	576 aa		4.59	□□□□□ -1.67
SRB7	YDR308C	YPT7	P32939	208 aa		4.59	□□□□□ -1.67
SRB7	YDR308C	PPE1	P38796	400 aa		4.59	□□□□□ -1.67
SRB7	YDR308C	LAM4	P38800	1345 aa		4.59	□□□□□ -1.67
SRB7	YDR308C	MDR1	P53258	950 aa		4.59	□□□□□ -1.67
SRB7	YDR308C	TIM50	Q02776	476 aa		4.59	□□□□□ -1.67
SRB7	YDR308C	TUP1	P16649	713 aa		4.58	□□□□□ -1.68
SRB7	YDR308C	ACO1	P19414	778 aa	Known RBP RIP-Chip data	4.58	□□□□□ -1.68	not detected
SRB7	YDR308C	CRG1	P38892	291 aa	RIP-Chip data	4.58	□□□□□ -1.68	not detected
SRB7	YDR308C	YEL025C	P39991	1188 aa		4.58	□□□□□ -1.68
SRB7	YDR308C	EMP65	P40085	556 aa		4.58	□□□□□ -1.68
SRB7	YDR308C	PMT6	P42934	759 aa		4.58	□□□□□ -1.68
SRB7	YDR308C	CCT7	P42943	550 aa	Known RBP	4.58	□□□□□ -1.68
SRB7	YDR308C	QRI1	P43123	477 aa	Known RBP	4.58	□□□□□ -1.68
SRB7	YDR308C	COG6	P53959	839 aa		4.58	□□□□□ -1.68
SRB7	YDR308C	UFO1	Q04511	668 aa		4.58	□□□□□ -1.68
SRB7	YDR308C	MDM20	Q12387	796 aa	Known RBP	4.58	□□□□□ -1.68
SRB7	YDR308C	ATP12	P22135	325 aa		4.57	□□□□□ -1.68
SRB7	YDR308C	MF(ALPHA)2	P32435	120 aa		4.57	□□□□□ -1.68
SRB7	YDR308C	PPZ2	P33329	710 aa		4.57	□□□□□ -1.68
SRB7	YDR308C	FTR1	P40088	404 aa		4.57	□□□□□ -1.68
SRB7	YDR308C	YIL166C	P40445	542 aa		4.57	□□□□□ -1.68
SRB7	YDR308C	PRM2	P40534	656 aa		4.57	□□□□□ -1.68
SRB7	YDR308C	THI6	P41835	540 aa		4.57	□□□□□ -1.68
SRB7	YDR308C	HOL1	P53389	586 aa		4.57	□□□□□ -1.68
SRB7	YDR308C	FDC1	Q03034	503 aa		4.57	□□□□□ -1.68
SRB7	YDR308C	PHM6	Q05637	104 aa		4.57	□□□□□ -1.68
SRB7	YDR308C	ECM38	Q05902	660 aa	Predicted RBP	4.57	□□□□□ -1.68
SRB7	YDR308C	YCG1	Q06680	1035 aa		4.57	□□□□□ -1.68
SRB7	YDR308C	CWC2	Q12046	339 aa	Predicted RBP	4.57	□□□□□ -1.68
SRB7	YDR308C	RKI1	Q12189	258 aa		4.57	□□□□□ -1.68
SRB7	YDR308C	TAF3	Q12297	353 aa		4.57	□□□□□ -1.68
SRB7	YDR308C	YEL076C-A	P0CX16	216 aa		4.56	□□□□□ -1.68
SRB7	YDR308C	YLR464W	P0CX17	216 aa		4.56	□□□□□ -1.68
SRB7	YDR308C	HMG2	P12684	1045 aa		4.56	□□□□□ -1.68
SRB7	YDR308C	PAF1	P38351	445 aa		4.56	□□□□□ -1.68
SRB7	YDR308C	SRP68	P38687	599 aa	Known RBP	4.56	□□□□□ -1.68
SRB7	YDR308C	YEL076C	P39971	216 aa		4.56	□□□□□ -1.68
SRB7	YDR308C	MFM1	Q02783	413 aa		4.56	□□□□□ -1.68
SRB7	YDR308C	TRS23	Q03784	219 aa		4.56	□□□□□ -1.68
SRB7	YDR308C	IZH3	Q07959	543 aa		4.56	□□□□□ -1.68
SRB7	YDR308C	PEX15	Q08215	383 aa		4.56	□□□□□ -1.68
SRB7	YDR308C	BMS1	Q08965	1183 aa	Known RBP	4.56	□□□□□ -1.68
SRB7	YDR308C	STE12	P13574	688 aa		4.55	□□□□□ -1.68
SRB7	YDR308C	RPA135	P22138	1203 aa	Known RBP	4.55	□□□□□ -1.68
SRB7	YDR308C	PLC1	P32383	869 aa		4.55	□□□□□ -1.68
SRB7	YDR308C	TOM20	P35180	183 aa		4.55	□□□□□ -1.68
SRB7	YDR308C	TAH11	P47112	604 aa		4.55	□□□□□ -1.68
SRB7	YDR308C	DAK1	P54838	584 aa	Known RBP	4.55	□□□□□ -1.68
SRB7	YDR308C	NGL2	Q03264	515 aa	Known RBP	4.55	□□□□□ -1.68
SRB7	YDR308C	RPN13	O13563	156 aa		4.54	□□□□□ -1.68
SRB7	YDR308C	SEC12	P11655	471 aa		4.54	□□□□□ -1.68
SRB7	YDR308C	MSS1	P32559	526 aa	Predicted RBP	4.54	□□□□□ -1.68
SRB7	YDR308C	DHR2	P36009	735 aa	Predicted RBP	4.54	□□□□□ -1.68
SRB7	YDR308C	UBS1	P38290	277 aa		4.54	□□□□□ -1.68
SRB7	YDR308C	EHT1	P38295	451 aa		4.54	□□□□□ -1.68
SRB7	YDR308C	YGR054W	P53235	642 aa	Known RBP	4.54	□□□□□ -1.68
SRB7	YDR308C	APM1	Q00776	475 aa	Predicted RBP	4.54	□□□□□ -1.68
SRB7	YDR308C	CEF1	Q03654	590 aa	Predicted RBP	4.54	□□□□□ -1.68
SRB7	YDR308C	HLR1	Q04429	423 aa		4.54	□□□□□ -1.68
SRB7	YDR308C	YPL216W	Q08964	1102 aa		4.54	□□□□□ -1.68
SRB7	YDR308C	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.54	□□□□□ -1.68	not detected
SRB7	YDR308C	HEM12	P32347	362 aa	Predicted RBP	4.53	□□□□□ -1.68
SRB7	YDR308C	PEX2	P32800	271 aa		4.53	□□□□□ -1.68
SRB7	YDR308C	GRX7	P38068	203 aa		4.53	□□□□□ -1.68
SRB7	YDR308C	MUP3	P38734	546 aa		4.53	□□□□□ -1.68
SRB7	YDR308C	RIM4	P38741	713 aa		4.53	□□□□□ -1.68
SRB7	YDR308C	EAF5	P39995	279 aa		4.53	□□□□□ -1.68
SRB7	YDR308C	YDR179W-A	Q03983	463 aa		4.53	□□□□□ -1.68
SRB7	YDR308C	VPS5	Q92331	675 aa		4.53	□□□□□ -1.68
SRB7	YDR308C	PCK1	P10963	549 aa		4.52	□□□□□ -1.69
SRB7	YDR308C	CDS1	P38221	457 aa		4.52	□□□□□ -1.69
SRB7	YDR308C	YEL020C	P39994	560 aa		4.52	□□□□□ -1.69
SRB7	YDR308C	MTD1	Q02046	320 aa	Known RBP	4.52	□□□□□ -1.69
SRB7	YDR308C	YOR378W	Q08902	515 aa		4.52	□□□□□ -1.69
SRB7	YDR308C	HOS1	Q12214	470 aa		4.52	□□□□□ -1.69
SRB7	YDR308C	TAD3	Q9URQ3	322 aa		4.52	□□□□□ -1.69
SRB7	YDR308C	TUF1	P02992	437 aa	Known RBP	4.51	□□□□□ -1.69
SRB7	YDR308C	EMP70	P32802	667 aa		4.51	□□□□□ -1.69
SRB7	YDR308C	RMA1	P36001	430 aa	Known RBP	4.51	□□□□□ -1.69
SRB7	YDR308C	ENP1	P38333	483 aa	Known RBP	4.51	□□□□□ -1.69
SRB7	YDR308C	PIH1	P38768	344 aa		4.51	□□□□□ -1.69
SRB7	YDR308C	PMC1	P38929	1173 aa	Predicted RBP	4.51	□□□□□ -1.69
SRB7	YDR308C	STL1	P39932	569 aa		4.51	□□□□□ -1.69
SRB7	YDR308C	YIP4	P53093	235 aa		4.51	□□□□□ -1.69
SRB7	YDR308C	SUT2	Q12286	268 aa		4.51	□□□□□ -1.69
SRB7	YDR308C	MTC7	P32633	139 aa		4.5	□□□□□ -1.69
SRB7	YDR308C	MRPL7	P36519	292 aa		4.5	□□□□□ -1.69
SRB7	YDR308C	YMC2	P38087	329 aa		4.5	□□□□□ -1.69
SRB7	YDR308C	SAW1	P39735	261 aa		4.5	□□□□□ -1.69
SRB7	YDR308C	IRC5	P43610	853 aa		4.5	□□□□□ -1.69
SRB7	YDR308C	ATG36	P46983	293 aa		4.5	□□□□□ -1.69
SRB7	YDR308C	PEF1	P53238	335 aa		4.5	□□□□□ -1.69
SRB7	YDR308C	SNF12	P53628	566 aa		4.5	□□□□□ -1.69
SRB7	YDR308C	EFR3	Q03653	782 aa	Known RBP	4.5	□□□□□ -1.69
SRB7	YDR308C	SND1	Q04007	877 aa		4.5	□□□□□ -1.69
SRB7	YDR308C	PSF3	Q12146	194 aa		4.5	□□□□□ -1.69
SRB7	YDR308C	PHO5	P00635	467 aa		4.49	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 73.5 ms