RNA–Protein interactions for RNA: YDR049W

VMS1, Transcript of Component of a Cdc48p-complex involved in protein quality control, yeastyeast

Gene VMS1, Length 1,899 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMS1YDR049W FET5P43561 622 aa6.06□□□□□ -1.44
VMS1YDR049W MET12P46151 657 aa6.06□□□□□ -1.44
VMS1YDR049W GCV2P49095 1034 aa6.06□□□□□ -1.44
VMS1YDR049W HFM1P51979 1187 aa6.06□□□□□ -1.44
VMS1YDR049W UTP22P53254 1237 aaPredicted RBP6.06□□□□□ -1.44
VMS1YDR049W RPT6Q01939 405 aaKnown RBP6.06□□□□□ -1.44
VMS1YDR049W YAP6Q03935 383 aa6.06□□□□□ -1.44
VMS1YDR049W GTB1Q04924 702 aa6.06□□□□□ -1.44
VMS1YDR049W DON1Q05610 365 aa6.06□□□□□ -1.44
VMS1YDR049W MRD1Q06106 887 aaKnown RBP6.06□□□□□ -1.44
VMS1YDR049W SEC39Q12745 709 aa6.06□□□□□ -1.44
VMS1YDR049W SYP1P25623 870 aaKnown RBP6.05□□□□□ -1.44
VMS1YDR049W YEL043WP32618 956 aa6.05□□□□□ -1.44
VMS1YDR049W AFR1P33304 620 aa6.05□□□□□ -1.44
VMS1YDR049W YHR202WP38887 602 aa6.05□□□□□ -1.44
VMS1YDR049W SIP5P40210 489 aaKnown RBP6.05□□□□□ -1.44
VMS1YDR049W BPL1P48445 690 aaPredicted RBP6.05□□□□□ -1.44
VMS1YDR049W TRF5P48561 642 aaKnown RBP6.05□□□□□ -1.44
VMS1YDR049W PUS4P48567 403 aaKnown RBP6.05□□□□□ -1.44
VMS1YDR049W VPS4P52917 437 aa6.05□□□□□ -1.44
VMS1YDR049W YBP2P53169 641 aa6.05□□□□□ -1.44
VMS1YDR049W SNO4Q04902 237 aa6.05□□□□□ -1.44
VMS1YDR049W KAP95Q06142 861 aaKnown RBP6.05□□□□□ -1.44
VMS1YDR049W HSP33Q08914 237 aaKnown RBP6.05□□□□□ -1.44
VMS1YDR049W HSP32Q08992 237 aa6.05□□□□□ -1.44
VMS1YDR049W ATP12P22135 325 aa6.05□□□□□ -1.44
VMS1YDR049W CCR4P31384 837 aaKnown RBP6.05□□□□□ -1.44
VMS1YDR049W OAF3P36023 863 aa6.05□□□□□ -1.44
VMS1YDR049W APE3P37302 537 aaKnown RBP6.05□□□□□ -1.44
VMS1YDR049W YBR287WP38355 427 aa6.05□□□□□ -1.44
VMS1YDR049W PIH1P38768 344 aa6.05□□□□□ -1.44
VMS1YDR049W UME6P39001 836 aa6.05□□□□□ -1.44
VMS1YDR049W PSF2P40359 213 aa6.05□□□□□ -1.44
VMS1YDR049W HXT10P43581 546 aa6.05□□□□□ -1.44
VMS1YDR049W TCB2P48231 1178 aa6.05□□□□□ -1.44
VMS1YDR049W YGR283CP53336 341 aaPredicted RBP6.05□□□□□ -1.44
VMS1YDR049W VPS75P53853 264 aa6.05□□□□□ -1.44
VMS1YDR049W ISU1Q03020 165 aa6.05□□□□□ -1.44
VMS1YDR049W ATP25Q03153 612 aa6.05□□□□□ -1.44
VMS1YDR049W RRB1Q04225 511 aaKnown RBP6.05□□□□□ -1.44
VMS1YDR049W RRT8Q08219 342 aa6.05□□□□□ -1.44
VMS1YDR049W NSI1Q12457 570 aa6.05□□□□□ -1.44
VMS1YDR049W SUP35P05453 685 aaKnown RBP6.04□□□□□ -1.44
VMS1YDR049W DAT1P13483 248 aaKnown RBP6.04□□□□□ -1.44
VMS1YDR049W VPS3P23643 1011 aa6.04□□□□□ -1.44
VMS1YDR049W HMX1P32339 317 aa6.04□□□□□ -1.44
VMS1YDR049W KAP122P32767 1081 aa6.04□□□□□ -1.44
VMS1YDR049W MRPL40P36534 297 aa6.04□□□□□ -1.44
VMS1YDR049W YFL052WP43551 465 aa6.04□□□□□ -1.44
VMS1YDR049W LCD1Q04377 747 aa6.04□□□□□ -1.44
VMS1YDR049W TSR1Q07381 788 aaKnown RBP6.04□□□□□ -1.44
VMS1YDR049W RPS21BQ3E754 87 aaKnown RBP6.04□□□□□ -1.44
VMS1YDR049W CDC19P00549 500 aaKnown RBP6.03□□□□□ -1.44
VMS1YDR049W DBP5P20449 482 aaKnown RBP6.03□□□□□ -1.44
VMS1YDR049W CLB1P24868 471 aa6.03□□□□□ -1.44
VMS1YDR049W CWH43P25618 953 aa6.03□□□□□ -1.44
VMS1YDR049W HSP104P31539 908 aaKnown RBP6.03□□□□□ -1.44
VMS1YDR049W DOA4P32571 926 aa6.03□□□□□ -1.44
VMS1YDR049W STB6P36085 766 aa6.03□□□□□ -1.44
VMS1YDR049W TAF5P38129 798 aa6.03□□□□□ -1.44
VMS1YDR049W PAC1P39946 494 aaKnown RBP6.03□□□□□ -1.44
VMS1YDR049W MRX1P40050 688 aa6.03□□□□□ -1.44
VMS1YDR049W ALT1P52893 592 aa6.03□□□□□ -1.44
VMS1YDR049W BSC5P53755 489 aa6.03□□□□□ -1.44
VMS1YDR049W YLR456WQ06199 204 aa6.03□□□□□ -1.44
VMS1YDR049W NOT3P06102 836 aaKnown RBP6.02□□□□□ -1.44
VMS1YDR049W CLC1P17891 233 aa6.02□□□□□ -1.44
VMS1YDR049W SPS22P25380 463 aa6.02□□□□□ -1.44
VMS1YDR049W MSP1P28737 362 aa6.02□□□□□ -1.44
VMS1YDR049W ACP1P32463 125 aa6.02□□□□□ -1.44
VMS1YDR049W SDS22P36047 338 aa6.02□□□□□ -1.44
VMS1YDR049W RRM3P38766 723 aa6.02□□□□□ -1.44
VMS1YDR049W AIM46P38885 310 aa6.02□□□□□ -1.44
VMS1YDR049W PIK1P39104 1066 aa6.02□□□□□ -1.44
VMS1YDR049W EFM4P40516 257 aa6.02□□□□□ -1.44
VMS1YDR049W DSD1P53095 428 aa6.02□□□□□ -1.44
VMS1YDR049W DUO1P53168 247 aaKnown RBP6.02□□□□□ -1.44
VMS1YDR049W CUL3P53202 744 aa6.02□□□□□ -1.44
VMS1YDR049W YNL050CP53952 270 aa6.02□□□□□ -1.44
VMS1YDR049W NHX1Q04121 633 aa6.02□□□□□ -1.44
VMS1YDR049W YOR352WQ08816 343 aa6.02□□□□□ -1.44
VMS1YDR049W ZRT2Q12436 422 aa6.02□□□□□ -1.44
VMS1YDR049W TY1A-DR4O74302 440 aa6.02□□□□□ -1.45
VMS1YDR049W ADE8P04161 214 aa6.02□□□□□ -1.45
VMS1YDR049W TY1A-HP0C2I4 478 aaKnown RBP6.02□□□□□ -1.45
VMS1YDR049W TY1A-AP0CX57 440 aa6.02□□□□□ -1.45
VMS1YDR049W TY1A-PR1P0CX58 440 aa6.02□□□□□ -1.45
VMS1YDR049W TY1A-ORP0CX59 440 aa6.02□□□□□ -1.45
VMS1YDR049W TY1A-PR2P0CX60 440 aa6.02□□□□□ -1.45
VMS1YDR049W TY1A-DR5P0CX65 440 aa6.02□□□□□ -1.45
VMS1YDR049W TY1A-ER2P0CX66 440 aa6.02□□□□□ -1.45
VMS1YDR049W TY1A-GR3P0CX67 440 aa6.02□□□□□ -1.45
VMS1YDR049W TY1A-LR1P0CX68 440 aa6.02□□□□□ -1.45
VMS1YDR049W TY1A-MR2P0CX69 440 aa6.02□□□□□ -1.45
VMS1YDR049W PRP22P24384 1145 aaKnown RBP6.02□□□□□ -1.45
VMS1YDR049W KIP1P28742 1111 aa6.02□□□□□ -1.45
VMS1YDR049W PYC2P32327 1180 aaKnown RBP6.02□□□□□ -1.45
VMS1YDR049W DAD2P36162 133 aa6.02□□□□□ -1.45
VMS1YDR049W ARL1P38116 183 aaKnown RBP6.02□□□□□ -1.45
VMS1YDR049W FAT1P38225 669 aa6.02□□□□□ -1.45
Retrieved 100 of 5,963 RNA–protein pairs in 18.9 ms