RNA–Protein interactions for RNA: YDL116W

NUP84, Transcript of Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC), yeastyeast

Gene NUP84, Length 2,181 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP84YDL116W YFL012WP43580 148 aa7.25□□□□□ -1.25
NUP84YDL116W YJR107WP47145 328 aa7.25□□□□□ -1.25
NUP84YDL116W MTC3P53077 123 aa7.25□□□□□ -1.25
NUP84YDL116W PXR1P53335 271 aaPredicted RBP7.25□□□□□ -1.25
NUP84YDL116W ASA1Q06822 443 aa7.25□□□□□ -1.25
NUP84YDL116W GPN2Q08726 347 aaPredicted RBP7.25□□□□□ -1.25
NUP84YDL116W TRE1Q08919 783 aa7.25□□□□□ -1.25
NUP84YDL116W PCL8Q08966 492 aa7.25□□□□□ -1.25
NUP84YDL116W TUB1P09733 447 aaKnown RBP7.25□□□□□ -1.25
NUP84YDL116W PDR1P12383 1068 aa7.25□□□□□ -1.25
NUP84YDL116W YSC83P32792 385 aa7.25□□□□□ -1.25
NUP84YDL116W APE4P38821 490 aa7.25□□□□□ -1.25
NUP84YDL116W SPR3P41901 512 aa7.25□□□□□ -1.25
NUP84YDL116W FIG4P42837 879 aa7.25□□□□□ -1.25
NUP84YDL116W VID30P53076 958 aa7.25□□□□□ -1.25
NUP84YDL116W KTR5P53966 522 aaPredicted RBP7.25□□□□□ -1.25
NUP84YDL116W ERO1Q03103 563 aa7.25□□□□□ -1.25
NUP84YDL116W YML119WQ03208 357 aa7.25□□□□□ -1.25
NUP84YDL116W RSA3Q05942 220 aaKnown RBP7.25□□□□□ -1.25
NUP84YDL116W FAR10Q06001 478 aa7.25□□□□□ -1.25
NUP84YDL116W UBX5Q06682 500 aa7.25□□□□□ -1.25
NUP84YDL116W ISA1Q07821 250 aaPredicted RBP7.25□□□□□ -1.25
NUP84YDL116W MET7Q08645 548 aa7.25□□□□□ -1.25
NUP84YDL116W CIR2Q08822 631 aa7.25□□□□□ -1.25
NUP84YDL116W FAP7Q12055 197 aaPredicted RBP7.25□□□□□ -1.25
NUP84YDL116W BI2P03873 423 aa7.24□□□□□ -1.25
NUP84YDL116W BI4P03879 638 aa7.24□□□□□ -1.25
NUP84YDL116W MPH2P0CD99 609 aa7.24□□□□□ -1.25
NUP84YDL116W KAR4P25583 335 aa7.24□□□□□ -1.25
NUP84YDL116W BCS1P32839 456 aa7.24□□□□□ -1.25
NUP84YDL116W SLA2P33338 968 aa7.24□□□□□ -1.25
NUP84YDL116W CSG2P35206 410 aa7.24□□□□□ -1.25
NUP84YDL116W PFF1P38244 976 aa7.24□□□□□ -1.25
NUP84YDL116W DIA4P38705 446 aaPredicted RBP7.24□□□□□ -1.25
NUP84YDL116W FLC2P39719 783 aa7.24□□□□□ -1.25
NUP84YDL116W MAM33P40513 266 aa7.24□□□□□ -1.25
NUP84YDL116W RGD2P43556 714 aa7.24□□□□□ -1.25
NUP84YDL116W MAD3P47074 515 aa7.24□□□□□ -1.25
NUP84YDL116W ORC5P50874 479 aa7.24□□□□□ -1.25
NUP84YDL116W PAN2P53010 1115 aaPredicted RBP7.24□□□□□ -1.25
NUP84YDL116W YMR160WQ03823 816 aa7.24□□□□□ -1.25
NUP84YDL116W YDR018CQ12185 396 aa7.24□□□□□ -1.25
NUP84YDL116W BI3Q9ZZW7 517 aa7.24□□□□□ -1.25
NUP84YDL116W BUD31P25337 157 aaPredicted RBP7.23□□□□□ -1.25
NUP84YDL116W UGA4P32837 571 aa7.23□□□□□ -1.25
NUP84YDL116W COY1P34237 679 aa7.23□□□□□ -1.25
NUP84YDL116W ATG19P35193 415 aa7.23□□□□□ -1.25
NUP84YDL116W GGA2P38817 585 aaKnown RBP7.23□□□□□ -1.25
NUP84YDL116W NPT1P39683 429 aaKnown RBP7.23□□□□□ -1.25
NUP84YDL116W ZAP1P47043 880 aa7.23□□□□□ -1.25
NUP84YDL116W LIA1P47120 325 aaKnown RBP7.23□□□□□ -1.25
NUP84YDL116W DCP2P53550 970 aaKnown RBP7.23□□□□□ -1.25
NUP84YDL116W ASI2P53895 289 aa7.23□□□□□ -1.25
NUP84YDL116W GRX3Q03835 250 aa7.23□□□□□ -1.25
NUP84YDL116W IVY1Q04934 453 aa7.23□□□□□ -1.25
NUP84YDL116W EMP46Q12396 444 aa7.23□□□□□ -1.25
NUP84YDL116W SNA3P14359 133 aa7.23□□□□□ -1.25
NUP84YDL116W TYR1P20049 452 aa7.23□□□□□ -1.25
NUP84YDL116W SAN1P22470 610 aa7.23□□□□□ -1.25
NUP84YDL116W IRE1P32361 1115 aa7.23□□□□□ -1.25
NUP84YDL116W PHO88P38264 188 aaPredicted RBP7.23□□□□□ -1.25
NUP84YDL116W MGE1P38523 228 aa7.23□□□□□ -1.25
NUP84YDL116W SHU2P38957 223 aa7.23□□□□□ -1.25
NUP84YDL116W BEM4P39011 633 aa7.23□□□□□ -1.25
NUP84YDL116W YCK3P39962 524 aa7.23□□□□□ -1.25
NUP84YDL116W JEM1P40358 645 aa7.23□□□□□ -1.25
NUP84YDL116W FIS1P40515 155 aa7.23□□□□□ -1.25
NUP84YDL116W YJL045WP47052 634 aa7.23□□□□□ -1.25
NUP84YDL116W EAF6P47128 113 aa7.23□□□□□ -1.25
NUP84YDL116W MUB1Q03162 620 aa7.23□□□□□ -1.25
NUP84YDL116W RLP24Q07915 199 aaKnown RBP7.23□□□□□ -1.25
NUP84YDL116W NTO1Q12311 748 aa7.23□□□□□ -1.25
NUP84YDL116W PDC5P16467 563 aaKnown RBP7.22□□□□□ -1.25
NUP84YDL116W SEC21P32074 935 aaKnown RBP7.22□□□□□ -1.25
NUP84YDL116W SEC6P32844 805 aa7.22□□□□□ -1.25
NUP84YDL116W TOM20P35180 183 aa7.22□□□□□ -1.25
NUP84YDL116W QNS1P38795 714 aaKnown RBP7.22□□□□□ -1.25
NUP84YDL116W VAC8P39968 578 aa7.22□□□□□ -1.25
NUP84YDL116W FTR1P40088 404 aa7.22□□□□□ -1.25
NUP84YDL116W HPM1P40481 377 aa7.22□□□□□ -1.25
NUP84YDL116W FAR3P46671 204 aa7.22□□□□□ -1.25
NUP84YDL116W FMP33P46998 180 aa7.22□□□□□ -1.25
NUP84YDL116W TRM44Q02648 567 aaKnown RBP7.22□□□□□ -1.25
NUP84YDL116W YMR209CQ03648 457 aa7.22□□□□□ -1.25
NUP84YDL116W DUS3Q06053 668 aaKnown RBP7.22□□□□□ -1.25
NUP84YDL116W IWR1Q07532 353 aaPredicted RBP7.22□□□□□ -1.25
NUP84YDL116W ACK1Q07622 623 aaPredicted RBP7.22□□□□□ -1.25
NUP84YDL116W NSE1Q07913 336 aa7.22□□□□□ -1.25
NUP84YDL116W IOC2Q12072 812 aa7.22□□□□□ -1.25
NUP84YDL116W SLY41P22215 453 aa7.22□□□□□ -1.25
NUP84YDL116W ATO2P32907 282 aa7.22□□□□□ -1.25
NUP84YDL116W BOL3P39724 118 aa7.22□□□□□ -1.25
NUP84YDL116W MAF1P41910 395 aa7.22□□□□□ -1.25
NUP84YDL116W PHO86P46956 311 aa7.22□□□□□ -1.25
NUP84YDL116W SKI8Q02793 397 aaPredicted RBP7.22□□□□□ -1.25
NUP84YDL116W CDC73Q06697 393 aa7.22□□□□□ -1.25
NUP84YDL116W PUF3Q07807 879 aaKnown RBP RIP-Chip data7.22□□□□□ -1.25not detected
NUP84YDL116W ECM3Q99252 613 aa7.22□□□□□ -1.25
NUP84YDL116W RPL4AP10664 362 aaKnown RBP7.21□□□□□ -1.26
NUP84YDL116W CDC42P19073 191 aa7.21□□□□□ -1.26
Retrieved 100 of 5,963 RNA–protein pairs in 84.5 ms