RNA–Protein interactions for RNA: YCR017C

CWH43, Transcript of Putative sensor/transporter protein involved in cell wall biogenesis, yeast

Gene CWH43, Length 2,862 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CWH43	YCR017C	YKL151C	P36059	337 aa		4.18	□□□□□ -1.74
CWH43	YCR017C	NMD3	P38861	518 aa	Known RBP	4.18	□□□□□ -1.74
CWH43	YCR017C	SPC72	P39723	622 aa		4.18	□□□□□ -1.74
CWH43	YCR017C	PAC1	P39946	494 aa	Known RBP	4.18	□□□□□ -1.74
CWH43	YCR017C	YIR016W	P40572	265 aa		4.18	□□□□□ -1.74
CWH43	YCR017C	SND1	Q04007	877 aa		4.18	□□□□□ -1.74
CWH43	YCR017C	PRM6	Q04705	352 aa		4.18	□□□□□ -1.74
CWH43	YCR017C	HPF1	Q05164	967 aa		4.18	□□□□□ -1.74
CWH43	YCR017C	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	4.18	□□□□□ -1.74	not detected
CWH43	YCR017C	SVS1	Q12254	260 aa		4.18	□□□□□ -1.74
CWH43	YCR017C	HRT3	Q12347	344 aa		4.18	□□□□□ -1.74
CWH43	YCR017C	CCP1	P00431	361 aa		4.17	□□□□□ -1.74
CWH43	YCR017C	GPI10	P30777	616 aa		4.17	□□□□□ -1.74
CWH43	YCR017C	LYS9	P38999	446 aa		4.17	□□□□□ -1.74
CWH43	YCR017C	GEM1	P39722	662 aa		4.17	□□□□□ -1.74
CWH43	YCR017C	VFA1	P40080	203 aa		4.17	□□□□□ -1.74
CWH43	YCR017C	MAF1	P41910	395 aa		4.17	□□□□□ -1.74
CWH43	YCR017C	YJR079W	P47126	109 aa		4.17	□□□□□ -1.74
CWH43	YCR017C	CSN12	P47130	423 aa		4.17	□□□□□ -1.74
CWH43	YCR017C	HMI1	Q12039	706 aa		4.17	□□□□□ -1.74
CWH43	YCR017C	APC11	Q12157	165 aa		4.17	□□□□□ -1.74
CWH43	YCR017C	LCB4	Q12246	624 aa		4.17	□□□□□ -1.74
CWH43	YCR017C	ENO2	P00925	437 aa	Known RBP	4.17	□□□□□ -1.74
CWH43	YCR017C	FUS1	P11710	512 aa		4.17	□□□□□ -1.74
CWH43	YCR017C	HOM2	P13663	365 aa	Known RBP	4.17	□□□□□ -1.74
CWH43	YCR017C	PUP1	P25043	261 aa		4.17	□□□□□ -1.74
CWH43	YCR017C	MNR2	P35724	969 aa		4.17	□□□□□ -1.74
CWH43	YCR017C	DUG2	P38149	878 aa		4.17	□□□□□ -1.74
CWH43	YCR017C	YBR225W	P38321	900 aa		4.17	□□□□□ -1.74
CWH43	YCR017C	VPS75	P53853	264 aa		4.17	□□□□□ -1.74
CWH43	YCR017C	MUB1	Q03162	620 aa		4.17	□□□□□ -1.74
CWH43	YCR017C	RTN1	Q04947	295 aa	Known RBP	4.17	□□□□□ -1.74
CWH43	YCR017C	ECM38	Q05902	660 aa	Predicted RBP	4.17	□□□□□ -1.74
CWH43	YCR017C	FMP25	Q08023	583 aa		4.17	□□□□□ -1.74
CWH43	YCR017C	MDM38	Q08179	573 aa		4.17	□□□□□ -1.74
CWH43	YCR017C	NDJ1	Q12366	352 aa		4.17	□□□□□ -1.74
CWH43	YCR017C	BI4	P03879	638 aa		4.16	□□□□□ -1.74
CWH43	YCR017C	ROX1	P25042	368 aa		4.16	□□□□□ -1.74
CWH43	YCR017C	HXT1	P32465	570 aa		4.16	□□□□□ -1.74
CWH43	YCR017C	IME2	P32581	645 aa		4.16	□□□□□ -1.74
CWH43	YCR017C	KAP104	P38217	918 aa	Known RBP	4.16	□□□□□ -1.74
CWH43	YCR017C	CHS6	P40955	746 aa		4.16	□□□□□ -1.74
CWH43	YCR017C	YGR021W	P53212	290 aa		4.16	□□□□□ -1.74
CWH43	YCR017C	DRN1	P53255	507 aa	Known RBP	4.16	□□□□□ -1.74
CWH43	YCR017C	ALF1	P53904	254 aa		4.16	□□□□□ -1.74
CWH43	YCR017C	YNL011C	P53980	444 aa		4.16	□□□□□ -1.74
CWH43	YCR017C	RPL22B	P56628	122 aa	Known RBP	4.16	□□□□□ -1.74
CWH43	YCR017C	CLU1	Q03690	1277 aa	Known RBP	4.16	□□□□□ -1.74
CWH43	YCR017C	YCG1	Q06680	1035 aa		4.16	□□□□□ -1.74
CWH43	YCR017C	DAS2	Q12084	232 aa		4.16	□□□□□ -1.74
CWH43	YCR017C	TRS33	Q99394	268 aa		4.16	□□□□□ -1.74
CWH43	YCR017C	MSH3	P25336	1018 aa		4.16	□□□□□ -1.74
CWH43	YCR017C	RRT12	P25381	491 aa		4.16	□□□□□ -1.74
CWH43	YCR017C	COY1	P34237	679 aa		4.16	□□□□□ -1.74
CWH43	YCR017C	CRP1	P38845	465 aa	Known RBP	4.16	□□□□□ -1.74
CWH43	YCR017C	PRM9	P39551	298 aa		4.16	□□□□□ -1.74
CWH43	YCR017C	EXO1	P39875	702 aa		4.16	□□□□□ -1.74
CWH43	YCR017C	HEM14	P40012	539 aa		4.16	□□□□□ -1.74
CWH43	YCR017C	DOT6	P40059	670 aa	Known RBP	4.16	□□□□□ -1.74
CWH43	YCR017C	YIL161W	P40449	235 aa	Known RBP	4.16	□□□□□ -1.74
CWH43	YCR017C	YGL081W	P53156	320 aa		4.16	□□□□□ -1.74
CWH43	YCR017C	TPO2	P53283	614 aa		4.16	□□□□□ -1.74
CWH43	YCR017C	GPD1	Q00055	391 aa	Known RBP	4.16	□□□□□ -1.74
CWH43	YCR017C	HER2	Q03557	464 aa		4.16	□□□□□ -1.74
CWH43	YCR017C	YMR018W	Q04364	514 aa		4.16	□□□□□ -1.74
CWH43	YCR017C	TMN2	Q04562	672 aa		4.16	□□□□□ -1.74
CWH43	YCR017C	CDD1	Q06549	142 aa		4.16	□□□□□ -1.74
CWH43	YCR017C	ALR1	Q08269	859 aa		4.16	□□□□□ -1.74
CWH43	YCR017C	SPO21	Q12411	609 aa		4.16	□□□□□ -1.74
CWH43	YCR017C	VPS5	Q92331	675 aa		4.16	□□□□□ -1.74
CWH43	YCR017C	CDC33	P07260	213 aa	Known RBP	4.16	□□□□□ -1.74
CWH43	YCR017C	PPZ1	P26570	692 aa		4.16	□□□□□ -1.74
CWH43	YCR017C	PSO2	P30620	661 aa		4.16	□□□□□ -1.74
CWH43	YCR017C	PYC2	P32327	1180 aa	Known RBP	4.16	□□□□□ -1.74
CWH43	YCR017C	YET1	P35723	206 aa		4.16	□□□□□ -1.74
CWH43	YCR017C	FAA3	P39002	694 aa		4.16	□□□□□ -1.74
CWH43	YCR017C	SBE2	P42223	864 aa	Known RBP	4.16	□□□□□ -1.74
CWH43	YCR017C	YGR111W	P53265	400 aa		4.16	□□□□□ -1.74
CWH43	YCR017C	LSC2	P53312	427 aa		4.16	□□□□□ -1.74
CWH43	YCR017C	ATG16	Q03818	150 aa		4.16	□□□□□ -1.74
CWH43	YCR017C	MSH6	Q03834	1242 aa		4.16	□□□□□ -1.74
CWH43	YCR017C	MRX10	Q05648	414 aa		4.16	□□□□□ -1.74
CWH43	YCR017C	DIS3	Q08162	1001 aa	Known RBP	4.16	□□□□□ -1.74
CWH43	YCR017C	AIM39	Q08223	395 aa		4.16	□□□□□ -1.74
CWH43	YCR017C	AFT2	Q08957	416 aa		4.16	□□□□□ -1.74
CWH43	YCR017C	TRM1	P15565	570 aa	Known RBP	4.15	□□□□□ -1.74
CWH43	YCR017C	PPH22	P23595	377 aa		4.15	□□□□□ -1.74
CWH43	YCR017C	ARL1	P38116	183 aa	Known RBP	4.15	□□□□□ -1.74
CWH43	YCR017C	PSY4	P38193	441 aa		4.15	□□□□□ -1.74
CWH43	YCR017C	PCM1	P38628	557 aa	Known RBP	4.15	□□□□□ -1.74
CWH43	YCR017C	ERP2	P39704	215 aa		4.15	□□□□□ -1.74
CWH43	YCR017C	SNZ3	P43545	298 aa		4.15	□□□□□ -1.74
CWH43	YCR017C	YJL132W	P47014	750 aa		4.15	□□□□□ -1.74
CWH43	YCR017C	SNZ2	P53824	298 aa		4.15	□□□□□ -1.74
CWH43	YCR017C	DOS2	P54858	310 aa		4.15	□□□□□ -1.74
CWH43	YCR017C	TAF9	Q05027	157 aa		4.15	□□□□□ -1.74
CWH43	YCR017C	PMT7	Q06644	662 aa		4.15	□□□□□ -1.74
CWH43	YCR017C	YLR012C	Q07927	99 aa		4.15	□□□□□ -1.74
CWH43	YCR017C	PDE1	P22434	369 aa		4.15	□□□□□ -1.75
CWH43	YCR017C	RRN6	P32786	894 aa		4.15	□□□□□ -1.75

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