RNA–Protein interactions for RNA: YBR228W

SLX1, Transcript of Endonuclease involved in DNA recombination and repair, yeast

Gene SLX1, Length 915 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SLX1	YBR228W	RAV1	P47104	1357 aa		5.63	□□□□□ -1.51
SLX1	YBR228W	ABF1	P14164	731 aa		5.62	□□□□□ -1.51
SLX1	YBR228W	KCC4	P25389	1037 aa		5.62	□□□□□ -1.51
SLX1	YBR228W	ORC2	P32833	620 aa		5.62	□□□□□ -1.51
SLX1	YBR228W	BIT2	P38346	545 aa		5.62	□□□□□ -1.51
SLX1	YBR228W	PAF1	P38351	445 aa		5.62	□□□□□ -1.51
SLX1	YBR228W	BRE5	P53741	515 aa	Known RBP	5.62	□□□□□ -1.51
SLX1	YBR228W	ATG33	Q06485	197 aa		5.62	□□□□□ -1.51
SLX1	YBR228W	MRI1	Q06489	411 aa	Known RBP	5.62	□□□□□ -1.51
SLX1	YBR228W	ISA1	Q07821	250 aa	Predicted RBP	5.62	□□□□□ -1.51
SLX1	YBR228W	CHS5	Q12114	671 aa	Known RBP	5.62	□□□□□ -1.51
SLX1	YBR228W	KSP1	P38691	1029 aa	Known RBP	5.61	□□□□□ -1.51
SLX1	YBR228W	STE12	P13574	688 aa		5.6	□□□□□ -1.51
SLX1	YBR228W	RPA135	P22138	1203 aa	Known RBP	5.6	□□□□□ -1.51
SLX1	YBR228W	PCL2	P25693	308 aa		5.6	□□□□□ -1.51
SLX1	YBR228W	GPD1	Q00055	391 aa	Known RBP	5.6	□□□□□ -1.51
SLX1	YBR228W	MAK10	Q02197	733 aa		5.6	□□□□□ -1.51
SLX1	YBR228W	POB3	Q04636	552 aa	Known RBP	5.6	□□□□□ -1.51
SLX1	YBR228W	YDL086W	Q07505	273 aa		5.6	□□□□□ -1.51
SLX1	YBR228W	TY1B-NL2	Q99337	1749 aa	Known RBP	5.6	□□□□□ -1.51
SLX1	YBR228W	RTC1	Q08281	1341 aa		5.59	□□□□□ -1.51
SLX1	YBR228W	HOM2	P13663	365 aa	Known RBP	5.59	□□□□□ -1.51
SLX1	YBR228W	SFL1	P20134	766 aa		5.59	□□□□□ -1.51
SLX1	YBR228W	SEC15	P22224	910 aa		5.59	□□□□□ -1.51
SLX1	YBR228W	YHR202W	P38887	602 aa		5.59	□□□□□ -1.51
SLX1	YBR228W	PAC2	P39937	518 aa		5.59	□□□□□ -1.51
SLX1	YBR228W	OSW7	P43611	510 aa		5.59	□□□□□ -1.51
SLX1	YBR228W	NMA2	P53204	395 aa		5.59	□□□□□ -1.51
SLX1	YBR228W	NTG2	Q08214	380 aa		5.59	□□□□□ -1.51
SLX1	YBR228W	GIN4	Q12263	1142 aa		5.59	□□□□□ -1.51
SLX1	YBR228W	ERG20	P08524	352 aa	Known RBP	5.58	□□□□□ -1.52
SLX1	YBR228W	PRP28	P23394	588 aa		5.58	□□□□□ -1.52
SLX1	YBR228W	FEN2	P25621	512 aa	Known RBP	5.58	□□□□□ -1.52
SLX1	YBR228W	SSZ1	P38788	538 aa	Known RBP	5.58	□□□□□ -1.52
SLX1	YBR228W	YHR097C	P38809	366 aa	Known RBP	5.58	□□□□□ -1.52
SLX1	YBR228W	YIL077C	P40508	320 aa		5.58	□□□□□ -1.52
SLX1	YBR228W	MPS3	P47069	682 aa		5.58	□□□□□ -1.52
SLX1	YBR228W	RFX1	P48743	811 aa		5.58	□□□□□ -1.52
SLX1	YBR228W	COG8	Q04632	607 aa		5.58	□□□□□ -1.52
SLX1	YBR228W	VPS34	P22543	875 aa		5.57	□□□□□ -1.52
SLX1	YBR228W	YKR075C	P36155	307 aa		5.57	□□□□□ -1.52
SLX1	YBR228W	PCM1	P38628	557 aa	Known RBP	5.57	□□□□□ -1.52
SLX1	YBR228W	YEL1	P34225	687 aa		5.56	□□□□□ -1.52
SLX1	YBR228W	YJR039W	P47107	1121 aa		5.56	□□□□□ -1.52
SLX1	YBR228W	MRK1	P50873	501 aa		5.56	□□□□□ -1.52
SLX1	YBR228W	FMP30	Q02883	468 aa		5.56	□□□□□ -1.52
SLX1	YBR228W	VPS36	Q06696	566 aa		5.56	□□□□□ -1.52
SLX1	YBR228W	SLK19	Q08581	821 aa	Known RBP	5.56	□□□□□ -1.52
SLX1	YBR228W	DCS2	Q12123	353 aa		5.56	□□□□□ -1.52
SLX1	YBR228W	POM34	Q12445	299 aa		5.56	□□□□□ -1.52
SLX1	YBR228W	BCK1	Q01389	1478 aa		5.56	□□□□□ -1.52
SLX1	YBR228W	LAM4	P38800	1345 aa		5.55	□□□□□ -1.52
SLX1	YBR228W	RPS9B	P05755	195 aa	Known RBP	5.55	□□□□□ -1.52
SLX1	YBR228W	ERG11	P10614	530 aa		5.55	□□□□□ -1.52
SLX1	YBR228W	AKL1	P38080	1108 aa	Known RBP	5.55	□□□□□ -1.52
SLX1	YBR228W	CTP1	P38152	299 aa		5.55	□□□□□ -1.52
SLX1	YBR228W	OSW1	Q08692	278 aa		5.55	□□□□□ -1.52
SLX1	YBR228W	NTH1	P32356	751 aa		5.54	□□□□□ -1.52
SLX1	YBR228W	APL3	P38065	1025 aa		5.54	□□□□□ -1.52
SLX1	YBR228W	RIM13	Q03792	727 aa		5.54	□□□□□ -1.52
SLX1	YBR228W	YSH1	Q06224	779 aa	Predicted RBP	5.54	□□□□□ -1.52
SLX1	YBR228W	VHS3	Q08438	674 aa		5.54	□□□□□ -1.52
SLX1	YBR228W	BMS1	Q08965	1183 aa	Known RBP	5.54	□□□□□ -1.52
SLX1	YBR228W	MDM20	Q12387	796 aa	Known RBP	5.54	□□□□□ -1.52
SLX1	YBR228W	SEC6	P32844	805 aa		5.53	□□□□□ -1.52
SLX1	YBR228W	PMC1	P38929	1173 aa	Predicted RBP	5.53	□□□□□ -1.52
SLX1	YBR228W	NUG1	P40010	520 aa	Known RBP	5.53	□□□□□ -1.52
SLX1	YBR228W	KHA1	P40309	873 aa		5.53	□□□□□ -1.52
SLX1	YBR228W	PMT6	P42934	759 aa		5.53	□□□□□ -1.52
SLX1	YBR228W	YAP7	Q08182	245 aa		5.53	□□□□□ -1.52
SLX1	YBR228W	RAD9	P14737	1309 aa		5.52	□□□□□ -1.53
SLX1	YBR228W	PHO5	P00635	467 aa		5.52	□□□□□ -1.53
SLX1	YBR228W	IMG2	P25642	146 aa	Predicted RBP	5.52	□□□□□ -1.53
SLX1	YBR228W	YMC2	P38087	329 aa		5.52	□□□□□ -1.53
SLX1	YBR228W	COS111	P38308	924 aa		5.52	□□□□□ -1.53
SLX1	YBR228W	BFA1	P47113	574 aa		5.52	□□□□□ -1.53
SLX1	YBR228W	DIP5	P53388	608 aa		5.52	□□□□□ -1.53
SLX1	YBR228W	TFB2	Q02939	513 aa		5.52	□□□□□ -1.53
SLX1	YBR228W	GUD1	Q07729	489 aa		5.52	□□□□□ -1.53
SLX1	YBR228W	RKI1	Q12189	258 aa		5.52	□□□□□ -1.53
SLX1	YBR228W	KRE5	P22023	1365 aa		5.52	□□□□□ -1.53
SLX1	YBR228W	TY3B-I	Q7LHG5	1498 aa	Known RBP	5.51	□□□□□ -1.53
SLX1	YBR228W	FRS1	P15624	595 aa	Known RBP	5.51	□□□□□ -1.53
SLX1	YBR228W	SAT4	P25333	603 aa	Known RBP	5.51	□□□□□ -1.53
SLX1	YBR228W	KIN82	P25341	720 aa		5.51	□□□□□ -1.53
SLX1	YBR228W	TAF5	P38129	798 aa		5.51	□□□□□ -1.53
SLX1	YBR228W	MIT1	P40002	666 aa		5.51	□□□□□ -1.53
SLX1	YBR228W	ASN1	P49089	572 aa	Known RBP	5.51	□□□□□ -1.53
SLX1	YBR228W	VBA4	Q04602	768 aa	Known RBP	5.51	□□□□□ -1.53
SLX1	YBR228W	CFT1	Q06632	1357 aa	Known RBP	5.51	□□□□□ -1.53
SLX1	YBR228W	PET127	P32606	800 aa		5.5	□□□□□ -1.53
SLX1	YBR228W	ESL2	P36168	1195 aa		5.5	□□□□□ -1.53
SLX1	YBR228W	MAL31	P38156	614 aa		5.5	□□□□□ -1.53
SLX1	YBR228W	BIT61	P47041	543 aa		5.5	□□□□□ -1.53
SLX1	YBR228W	GLO1	P50107	326 aa		5.5	□□□□□ -1.53
SLX1	YBR228W	MET13	P53128	600 aa		5.5	□□□□□ -1.53
SLX1	YBR228W	YMR210W	Q03649	449 aa		5.5	□□□□□ -1.53
SLX1	YBR228W	SEG1	Q04279	960 aa		5.5	□□□□□ -1.53
SLX1	YBR228W	YFT2	Q06676	274 aa		5.5	□□□□□ -1.53
SLX1	YBR228W	ADE5,7	P07244	802 aa	Known RBP	5.49	□□□□□ -1.53

Retrieved 100 of 5,963 RNA–protein pairs in 78.9 ms