RNA–Protein interactions for RNA: YBR204C

LDH1, Transcript of Serine hydrolase, yeast

Gene LDH1, Length 1,128 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LDH1	YBR204C	FEN2	P25621	512 aa	Known RBP	4.87	□□□□□ -1.63
LDH1	YBR204C	PRE4	P30657	266 aa		4.87	□□□□□ -1.63
LDH1	YBR204C	RIX1	P38883	763 aa	Predicted RBP	4.87	□□□□□ -1.63
LDH1	YBR204C	PIG2	P40187	538 aa		4.87	□□□□□ -1.63
LDH1	YBR204C	FHN1	P53279	174 aa		4.87	□□□□□ -1.63
LDH1	YBR204C	YAP1802	P53309	568 aa		4.87	□□□□□ -1.63
LDH1	YBR204C	HOL1	P53389	586 aa		4.87	□□□□□ -1.63
LDH1	YBR204C	ZRT2	Q12436	422 aa		4.87	□□□□□ -1.63
LDH1	YBR204C	ATP4	P05626	244 aa		4.86	□□□□□ -1.63
LDH1	YBR204C	SST2	P11972	698 aa	Known RBP	4.86	□□□□□ -1.63
LDH1	YBR204C	DMC1	P25453	334 aa		4.86	□□□□□ -1.63
LDH1	YBR204C	ILV6	P25605	309 aa	Known RBP	4.86	□□□□□ -1.63
LDH1	YBR204C	NIC96	P34077	839 aa		4.86	□□□□□ -1.63
LDH1	YBR204C	PHO11	P35842	467 aa		4.86	□□□□□ -1.63
LDH1	YBR204C	COS111	P38308	924 aa		4.86	□□□□□ -1.63
LDH1	YBR204C	YHR033W	P38690	423 aa		4.86	□□□□□ -1.63
LDH1	YBR204C	PHO12	P38693	467 aa		4.86	□□□□□ -1.63
LDH1	YBR204C	YIL166C	P40445	542 aa		4.86	□□□□□ -1.63
LDH1	YBR204C	YIL077C	P40508	320 aa		4.86	□□□□□ -1.63
LDH1	YBR204C	PRM2	P40534	656 aa		4.86	□□□□□ -1.63
LDH1	YBR204C	MTD1	Q02046	320 aa	Known RBP	4.86	□□□□□ -1.63
LDH1	YBR204C	YFT2	Q06676	274 aa		4.86	□□□□□ -1.63
LDH1	YBR204C	CWC2	Q12046	339 aa	Predicted RBP	4.86	□□□□□ -1.63
LDH1	YBR204C	CHS5	Q12114	671 aa	Known RBP	4.86	□□□□□ -1.63
LDH1	YBR204C	YEL076C-A	P0CX16	216 aa		4.85	□□□□□ -1.63
LDH1	YBR204C	YLR464W	P0CX17	216 aa		4.85	□□□□□ -1.63
LDH1	YBR204C	MTC7	P32633	139 aa		4.85	□□□□□ -1.63
LDH1	YBR204C	YEL076C	P39971	216 aa		4.85	□□□□□ -1.63
LDH1	YBR204C	EAF5	P39995	279 aa		4.85	□□□□□ -1.63
LDH1	YBR204C	ATG36	P46983	293 aa		4.85	□□□□□ -1.63
LDH1	YBR204C	RFX1	P48743	811 aa		4.85	□□□□□ -1.63
LDH1	YBR204C	IMO32	P53219	342 aa		4.85	□□□□□ -1.63
LDH1	YBR204C	YOR378W	Q08902	515 aa		4.85	□□□□□ -1.63
LDH1	YBR204C	CDS1	P38221	457 aa		4.84	□□□□□ -1.63
LDH1	YBR204C	STL1	P39932	569 aa		4.84	□□□□□ -1.63
LDH1	YBR204C	PEF1	P53238	335 aa		4.84	□□□□□ -1.63
LDH1	YBR204C	CNM67	P53865	581 aa	Known RBP	4.84	□□□□□ -1.63
LDH1	YBR204C	HLR1	Q04429	423 aa		4.84	□□□□□ -1.63
LDH1	YBR204C	MLH3	Q12083	715 aa		4.84	□□□□□ -1.63
LDH1	YBR204C	THR1	P17423	357 aa	Known RBP	4.83	□□□□□ -1.64
LDH1	YBR204C	MSS1	P32559	526 aa	Predicted RBP	4.83	□□□□□ -1.64
LDH1	YBR204C	CRG1	P38892	291 aa	RIP-Chip data	4.83	□□□□□ -1.64	not detected
LDH1	YBR204C	FTR1	P40088	404 aa		4.83	□□□□□ -1.64
LDH1	YBR204C	TPM2	P40414	161 aa		4.83	□□□□□ -1.64
LDH1	YBR204C	MPS3	P47069	682 aa		4.83	□□□□□ -1.64
LDH1	YBR204C	MET14	Q02196	202 aa		4.83	□□□□□ -1.64
LDH1	YBR204C	FDC1	Q03034	503 aa		4.83	□□□□□ -1.64
LDH1	YBR204C	COQ11	Q05892	277 aa		4.83	□□□□□ -1.64
LDH1	YBR204C	YNL162W-A	Q3E7A8	72 aa		4.83	□□□□□ -1.64
LDH1	YBR204C	VPS5	Q92331	675 aa		4.83	□□□□□ -1.64
LDH1	YBR204C	HMG2	P12684	1045 aa		4.82	□□□□□ -1.64
LDH1	YBR204C	TUP1	P16649	713 aa		4.82	□□□□□ -1.64
LDH1	YBR204C	KCC4	P25389	1037 aa		4.82	□□□□□ -1.64
LDH1	YBR204C	YJL206C	P39529	758 aa		4.82	□□□□□ -1.64
LDH1	YBR204C	SSP120	P39931	234 aa	Known RBP	4.82	□□□□□ -1.64
LDH1	YBR204C	YIL092W	P40497	633 aa		4.82	□□□□□ -1.64
LDH1	YBR204C	RTS3	P53289	263 aa		4.82	□□□□□ -1.64
LDH1	YBR204C	SQS1	P53866	767 aa	Known RBP	4.82	□□□□□ -1.64
LDH1	YBR204C	PSF3	Q12146	194 aa		4.82	□□□□□ -1.64
LDH1	YBR204C	NYV1	Q12255	253 aa		4.82	□□□□□ -1.64
LDH1	YBR204C	HOP1	P20050	605 aa		4.81	□□□□□ -1.64
LDH1	YBR204C	PHO3	P24031	467 aa		4.81	□□□□□ -1.64
LDH1	YBR204C	CWH43	P25618	953 aa		4.81	□□□□□ -1.64
LDH1	YBR204C	NTH1	P32356	751 aa		4.81	□□□□□ -1.64
LDH1	YBR204C	YKL133C	P36066	463 aa		4.81	□□□□□ -1.64
LDH1	YBR204C	CTP1	P38152	299 aa		4.81	□□□□□ -1.64
LDH1	YBR204C	KHA1	P40309	873 aa		4.81	□□□□□ -1.64
LDH1	YBR204C	PUS4	P48567	403 aa	Known RBP	4.81	□□□□□ -1.64
LDH1	YBR204C	YDL183C	P48569	320 aa		4.81	□□□□□ -1.64
LDH1	YBR204C	PIP2	P52960	996 aa		4.81	□□□□□ -1.64
LDH1	YBR204C	MNT2	P53059	558 aa		4.81	□□□□□ -1.64
LDH1	YBR204C	SMX3	P54999	86 aa	Predicted RBP	4.81	□□□□□ -1.64
LDH1	YBR204C	ARO10	Q06408	635 aa		4.81	□□□□□ -1.64
LDH1	YBR204C	YCG1	Q06680	1035 aa		4.81	□□□□□ -1.64
LDH1	YBR204C	AIM41	Q12032	185 aa		4.81	□□□□□ -1.64
LDH1	YBR204C	USV1	Q12132	391 aa		4.81	□□□□□ -1.64
LDH1	YBR204C	GAL1	P04385	528 aa		4.8	□□□□□ -1.64
LDH1	YBR204C	SPO11	P23179	398 aa		4.8	□□□□□ -1.64
LDH1	YBR204C	ADY2	P25613	283 aa		4.8	□□□□□ -1.64
LDH1	YBR204C	RMA1	P36001	430 aa	Known RBP	4.8	□□□□□ -1.64
LDH1	YBR204C	RRP8	P38961	392 aa	Known RBP	4.8	□□□□□ -1.64
LDH1	YBR204C	MAD2	P40958	196 aa		4.8	□□□□□ -1.64
LDH1	YBR204C	ATG4	P53867	494 aa		4.8	□□□□□ -1.64
LDH1	YBR204C	HOF1	Q05080	669 aa		4.8	□□□□□ -1.64
LDH1	YBR204C	MLC2	Q06580	163 aa		4.8	□□□□□ -1.64
LDH1	YBR204C	NUR1	Q12066	484 aa		4.8	□□□□□ -1.64
LDH1	YBR204C	RTK1	Q12100	620 aa	Predicted RBP	4.8	□□□□□ -1.64
LDH1	YBR204C	TUF1	P02992	437 aa	Known RBP	4.79	□□□□□ -1.64
LDH1	YBR204C	ABF1	P14164	731 aa		4.79	□□□□□ -1.64
LDH1	YBR204C	YEF3	P16521	1044 aa	Known RBP	4.79	□□□□□ -1.64
LDH1	YBR204C	PTP2	P29461	750 aa		4.79	□□□□□ -1.64
LDH1	YBR204C	SET3	P36124	751 aa		4.79	□□□□□ -1.64
LDH1	YBR204C	FLO10	P36170	1169 aa		4.79	□□□□□ -1.64
LDH1	YBR204C	SAW1	P39735	261 aa		4.79	□□□□□ -1.64
LDH1	YBR204C	TMN3	P40071	706 aa		4.79	□□□□□ -1.64
LDH1	YBR204C	ARG2	P40360	574 aa		4.79	□□□□□ -1.64
LDH1	YBR204C	ASK10	P48361	1146 aa		4.79	□□□□□ -1.64
LDH1	YBR204C	APM1	Q00776	475 aa	Predicted RBP	4.79	□□□□□ -1.64
LDH1	YBR204C	CEG1	Q01159	459 aa	Predicted RBP	4.79	□□□□□ -1.64
LDH1	YBR204C	TIM50	Q02776	476 aa		4.79	□□□□□ -1.64

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