RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 MYH16Q9H6N6 1097 aa5.15□□□□□ -1.59
HMGB1P50-201ENST00000605814 OAS3Q9Y6K5 1087 aaKnown RBP5.15□□□□□ -1.59
HMGB1P50-201ENST00000605814 FGD6Q6ZV73 1430 aa5.14□□□□□ -1.59
HMGB1P50-201ENST00000605814 PLEKHH2Q8IVE3 1493 aa5.14□□□□□ -1.59
HMGB1P50-201ENST00000605814 WNT11O96014 354 aa5.14□□□□□ -1.59
HMGB1P50-201ENST00000605814 BMP3P12645 472 aa5.14□□□□□ -1.59
HMGB1P50-201ENST00000605814 PCSK2P16519 638 aa5.14□□□□□ -1.59
HMGB1P50-201ENST00000605814 PTMSP20962 102 aa5.14□□□□□ -1.59
HMGB1P50-201ENST00000605814 RXRBP28702 533 aa5.14□□□□□ -1.59
HMGB1P50-201ENST00000605814 MCM4P33991 863 aa5.14□□□□□ -1.59
HMGB1P50-201ENST00000605814 FAM50AQ14320 339 aaKnown RBP5.14□□□□□ -1.59
HMGB1P50-201ENST00000605814 ZNF326Q5BKZ1 582 aaKnown RBP5.14□□□□□ -1.59
HMGB1P50-201ENST00000605814 CFAP70Q5T0N1 1121 aa5.14□□□□□ -1.59
HMGB1P50-201ENST00000605814 ANKRD34AQ69YU3 496 aa5.14□□□□□ -1.59
HMGB1P50-201ENST00000605814 BEND4Q6ZU67 534 aa5.14□□□□□ -1.59
HMGB1P50-201ENST00000605814 ZNF438Q7Z4V0 828 aa5.14□□□□□ -1.59
HMGB1P50-201ENST00000605814 ZDHHC13Q8IUH4 622 aa5.14□□□□□ -1.59
HMGB1P50-201ENST00000605814 ARMC10Q8N2F6 343 aa5.14□□□□□ -1.59
HMGB1P50-201ENST00000605814 UBASH3BQ8TF42 649 aa5.14□□□□□ -1.59
HMGB1P50-201ENST00000605814 PBX4Q9BYU1 374 aa5.14□□□□□ -1.59
HMGB1P50-201ENST00000605814 SAP130Q9H0E3 1048 aa5.14□□□□□ -1.59
HMGB1P50-201ENST00000605814 RNF208Q9H0X6 261 aa5.14□□□□□ -1.59
HMGB1P50-201ENST00000605814 ANGEL1Q9UNK9 670 aaKnown RBP5.14□□□□□ -1.59
HMGB1P50-201ENST00000605814 USP19O94966 1318 aa5.14□□□□□ -1.59
HMGB1P50-201ENST00000605814 CASKIN1Q8WXD9 1431 aa5.14□□□□□ -1.59
HMGB1P50-201ENST00000605814 DENND4BO75064 1496 aaPredicted RBP5.13□□□□□ -1.59
HMGB1P50-201ENST00000605814 FYCO1Q9BQS8 1478 aa5.13□□□□□ -1.59
HMGB1P50-201ENST00000605814 GCC2Q8IWJ2 1684 aa5.13□□□□□ -1.59
HMGB1P50-201ENST00000605814 H3BRJ5 948 aa5.13□□□□□ -1.59
HMGB1P50-201ENST00000605814 KIF20AO95235 890 aa5.13□□□□□ -1.59
HMGB1P50-201ENST00000605814 PDIA4P13667 645 aaKnown RBP5.13□□□□□ -1.59
HMGB1P50-201ENST00000605814 EPHA1P21709 976 aa5.13□□□□□ -1.59
HMGB1P50-201ENST00000605814 NLRP12P59046 1061 aa5.13□□□□□ -1.59
HMGB1P50-201ENST00000605814 COL13A1Q5TAT6 717 aaPredicted RBP5.13□□□□□ -1.59
HMGB1P50-201ENST00000605814 CLEC10AQ8IUN9 316 aa5.13□□□□□ -1.59
HMGB1P50-201ENST00000605814 SHKBP1Q8TBC3 707 aa5.13□□□□□ -1.59
HMGB1P50-201ENST00000605814 TMC1Q8TDI8 760 aa5.13□□□□□ -1.59
HMGB1P50-201ENST00000605814 COL26A1Q96A83 441 aa5.13□□□□□ -1.59
HMGB1P50-201ENST00000605814 RUSC1Q9BVN2 902 aa5.13□□□□□ -1.59
HMGB1P50-201ENST00000605814 GTPBP4Q9BZE4 634 aaKnown RBP5.13□□□□□ -1.59
HMGB1P50-201ENST00000605814 SH2B1Q9NRF2 756 aaPredicted RBP5.13□□□□□ -1.59
HMGB1P50-201ENST00000605814 KCNK4Q9NYG8 393 aa5.13□□□□□ -1.59
HMGB1P50-201ENST00000605814 KANSL3Q9P2N6 904 aa5.13□□□□□ -1.59
HMGB1P50-201ENST00000605814 ZNF777Q9ULD5 760 aaPredicted RBP5.13□□□□□ -1.59
HMGB1P50-201ENST00000605814 KIF15Q9NS87 1388 aa5.13□□□□□ -1.59
HMGB1P50-201ENST00000605814 RPRD2Q5VT52 1461 aaKnown RBP5.13□□□□□ -1.59
HMGB1P50-201ENST00000605814 WDR64B1ANS9 1081 aa5.12□□□□□ -1.59
HMGB1P50-201ENST00000605814 DYNC1I1O14576 645 aa5.12□□□□□ -1.59
HMGB1P50-201ENST00000605814 DDX3YO15523 660 aaKnown RBP5.12□□□□□ -1.59
HMGB1P50-201ENST00000605814 MED26O95402 600 aa5.12□□□□□ -1.59
HMGB1P50-201ENST00000605814 RIPK4P57078 832 aa5.12□□□□□ -1.59
HMGB1P50-201ENST00000605814 PIP4K2BP78356 416 aa5.12□□□□□ -1.59
HMGB1P50-201ENST00000605814 DMTNQ08495 405 aa5.12□□□□□ -1.59
HMGB1P50-201ENST00000605814 SKOR2Q2VWA4 1001 aaPredicted RBP5.12□□□□□ -1.59
HMGB1P50-201ENST00000605814 TAF7LQ5H9L4 462 aa5.12□□□□□ -1.59
HMGB1P50-201ENST00000605814 TAF3Q5VWG9 929 aa5.12□□□□□ -1.59
HMGB1P50-201ENST00000605814 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.12□□□□□ -1.59
HMGB1P50-201ENST00000605814 KIAA1211Q6ZU35 1233 aa5.12□□□□□ -1.59
HMGB1P50-201ENST00000605814 FAM20CQ8IXL6 584 aa5.12□□□□□ -1.59
HMGB1P50-201ENST00000605814 FAM46AQ96IP4 442 aaKnown RBP5.12□□□□□ -1.59
HMGB1P50-201ENST00000605814 GRPEL1Q9HAV7 217 aa5.12□□□□□ -1.59
HMGB1P50-201ENST00000605814 ATG3Q9NT62 314 aa5.12□□□□□ -1.59
HMGB1P50-201ENST00000605814 STIM2Q9P246 746 aa5.12□□□□□ -1.59
HMGB1P50-201ENST00000605814 HIF3AQ9Y2N7 669 aa5.12□□□□□ -1.59
HMGB1P50-201ENST00000605814 MYBBP1AQ9BQG0 1328 aaKnown RBP5.12□□□□□ -1.59
HMGB1P50-201ENST00000605814 ANKRD30BQ9BXX2 1392 aa5.12□□□□□ -1.59
HMGB1P50-201ENST00000605814 PTPRKQ15262 1439 aa5.12□□□□□ -1.59
HMGB1P50-201ENST00000605814 CUX1P39880 1505 aa5.12□□□□□ -1.59
HMGB1P50-201ENST00000605814 ZNF500O60304 480 aaPredicted RBP5.11□□□□□ -1.59
HMGB1P50-201ENST00000605814 KIF4AO95239 1232 aa5.11□□□□□ -1.59
HMGB1P50-201ENST00000605814 RPLP1P05386 114 aaKnown RBP5.11□□□□□ -1.59
HMGB1P50-201ENST00000605814 MCM5P33992 734 aa5.11□□□□□ -1.59
HMGB1P50-201ENST00000605814 RGS3P49796 1198 aa5.11□□□□□ -1.59
HMGB1P50-201ENST00000605814 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.11□□□□□ -1.59
HMGB1P50-201ENST00000605814 ZSCAN30Q86W11 494 aa5.11□□□□□ -1.59
HMGB1P50-201ENST00000605814 KRTAP19-1Q8IUB9 90 aa5.11□□□□□ -1.59
HMGB1P50-201ENST00000605814 FOXD4L4Q8WXT5 416 aaPredicted RBP5.11□□□□□ -1.59
HMGB1P50-201ENST00000605814 WNT8BQ93098 351 aa5.11□□□□□ -1.59
HMGB1P50-201ENST00000605814 KLHDC7BQ96G42 594 aa5.11□□□□□ -1.59
HMGB1P50-201ENST00000605814 CRBNQ96SW2 442 aa5.11□□□□□ -1.59
HMGB1P50-201ENST00000605814 FAM83CQ9BQN1 747 aa5.11□□□□□ -1.59
HMGB1P50-201ENST00000605814 CHMP5Q9NZZ3 219 aa5.11□□□□□ -1.59
HMGB1P50-201ENST00000605814 CXXC1Q9P0U4 656 aaPredicted RBP5.11□□□□□ -1.59
HMGB1P50-201ENST00000605814 EIF3AQ14152 1382 aaKnown RBP5.11□□□□□ -1.59
HMGB1P50-201ENST00000605814 IBTKQ9P2D0 1353 aaPredicted RBP5.11□□□□□ -1.59
HMGB1P50-201ENST00000605814 TCOF1Q13428 1488 aaKnown RBP5.11□□□□□ -1.59
HMGB1P50-201ENST00000605814 FGD5Q6ZNL6 1462 aa5.11□□□□□ -1.59
HMGB1P50-201ENST00000605814 EFCAB5A4FU69 1503 aa5.11□□□□□ -1.59
HMGB1P50-201ENST00000605814 CYP2E1P05181 493 aaPredicted RBP5.1□□□□□ -1.59
HMGB1P50-201ENST00000605814 SPINK2P20155 84 aa5.1□□□□□ -1.59
HMGB1P50-201ENST00000605814 CES1P23141 567 aa5.1□□□□□ -1.59
HMGB1P50-201ENST00000605814 PREPP48147 710 aa5.1□□□□□ -1.59
HMGB1P50-201ENST00000605814 CCDC173Q0VFZ6 552 aa5.1□□□□□ -1.59
HMGB1P50-201ENST00000605814 OCLNQ16625 522 aa5.1□□□□□ -1.59
HMGB1P50-201ENST00000605814 TMEM132AQ24JP5 1023 aa5.1□□□□□ -1.59
HMGB1P50-201ENST00000605814 NBPF8Q3BBV2 869 aa5.1□□□□□ -1.59
HMGB1P50-201ENST00000605814 NUTM2GQ5VZR2 741 aa5.1□□□□□ -1.59
HMGB1P50-201ENST00000605814 PDE12Q6L8Q7 609 aaKnown RBP5.1□□□□□ -1.59
HMGB1P50-201ENST00000605814 DTX1Q86Y01 620 aa5.1□□□□□ -1.59
HMGB1P50-201ENST00000605814 TEX14Q8IWB6 1497 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms