RNA–Protein interactions for RNA: ENST00000601600.1

SYMPK-217, Transcript of symplekin, humanhuman

TSL 4

Gene SYMPK, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-217ENST00000601600 DNAAF2Q9NVR5 837 aaKnown RBP12.5□□□□□ -0.41
SYMPK-217ENST00000601600 MTMR7Q9Y216 660 aa12.5□□□□□ -0.41
SYMPK-217ENST00000601600 GNEQ9Y223 722 aaKnown RBP12.5□□□□□ -0.41
SYMPK-217ENST00000601600 RNF123Q5XPI4 1314 aa12.5□□□□□ -0.41
SYMPK-217ENST00000601600 COL11A2P13942 1736 aaPredicted RBP12.49□□□□□ -0.41
SYMPK-217ENST00000601600 NPHP1O15259 732 aa12.49□□□□□ -0.41
SYMPK-217ENST00000601600 U2AF1L5P0DN76 240 aaPredicted RBP12.49□□□□□ -0.41
SYMPK-217ENST00000601600 U2AF1Q01081 240 aaKnown RBP eCLIP12.49□□□□□ -0.41
SYMPK-217ENST00000601600 RASSF7Q02833 373 aa12.49□□□□□ -0.41
SYMPK-217ENST00000601600 TBC1D9BQ66K14 1250 aa12.49□□□□□ -0.41
SYMPK-217ENST00000601600 SETDB2Q96T68 719 aa12.49□□□□□ -0.41
SYMPK-217ENST00000601600 KIAA1024Q9UPX6 916 aa12.49□□□□□ -0.41
SYMPK-217ENST00000601600 ARFGEF2Q9Y6D5 1785 aa12.48□□□□□ -0.41
SYMPK-217ENST00000601600 NEFMP07197 916 aa12.48□□□□□ -0.41
SYMPK-217ENST00000601600 PRR5LQ6MZQ0 368 aa12.48□□□□□ -0.41
SYMPK-217ENST00000601600 CNBD1Q8NA66 436 aa12.48□□□□□ -0.41
SYMPK-217ENST00000601600 RUNDC1Q96C34 613 aa12.48□□□□□ -0.41
SYMPK-217ENST00000601600 RRAGCQ9HB90 399 aa12.48□□□□□ -0.41
SYMPK-217ENST00000601600 PPP4R2Q9NY27 417 aa12.48□□□□□ -0.41
SYMPK-217ENST00000601600 ZNF652Q9Y2D9 606 aa12.48□□□□□ -0.41
SYMPK-217ENST00000601600 CCDC88AQ3V6T2 1871 aa12.48□□□□□ -0.41
SYMPK-217ENST00000601600 GLTPD2A6NH11 291 aa12.47□□□□□ -0.41
SYMPK-217ENST00000601600 ESPNB1AK53 854 aa12.47□□□□□ -0.41
SYMPK-217ENST00000601600 ZBTB7BO15156 539 aaPredicted RBP12.47□□□□□ -0.41
SYMPK-217ENST00000601600 HTATSF1O43719 755 aaKnown RBP12.47□□□□□ -0.41
SYMPK-217ENST00000601600 DKK1O94907 266 aa12.47□□□□□ -0.41
SYMPK-217ENST00000601600 A1BGP04217 495 aa12.47□□□□□ -0.41
SYMPK-217ENST00000601600 ATP1A2P50993 1020 aa12.47□□□□□ -0.41
SYMPK-217ENST00000601600 ST5P78524 1137 aa12.47□□□□□ -0.41
SYMPK-217ENST00000601600 RNF20Q5VTR2 975 aa12.47□□□□□ -0.41
SYMPK-217ENST00000601600 POTEGQ6S5H5 508 aa12.47□□□□□ -0.41
SYMPK-217ENST00000601600 CLP1Q92989 425 aaKnown RBP12.47□□□□□ -0.41
SYMPK-217ENST00000601600 ZNF622Q969S3 477 aaKnown RBP eCLIP12.47□□□□□ -0.413e-9■□□□□ 10.1
SYMPK-217ENST00000601600 LAMB4A4D0S4 1761 aa12.47□□□□□ -0.41
SYMPK-217ENST00000601600 CACNA1SQ13698 1873 aa12.46□□□□□ -0.41
SYMPK-217ENST00000601600 FER1L6Q2WGJ9 1857 aa12.46□□□□□ -0.41
SYMPK-217ENST00000601600 CAMTA2O94983 1202 aa12.46□□□□□ -0.41
SYMPK-217ENST00000601600 SNRPA1P09661 255 aaKnown RBP12.46□□□□□ -0.41
SYMPK-217ENST00000601600 VEGFAP15692 232 aaPredicted RBP12.46□□□□□ -0.41
SYMPK-217ENST00000601600 GTF2IP78347 998 aa12.46□□□□□ -0.41
SYMPK-217ENST00000601600 NBPF20Q3BBV1 942 aa12.46□□□□□ -0.41
SYMPK-217ENST00000601600 CLEC4GQ6UXB4 293 aa12.46□□□□□ -0.41
SYMPK-217ENST00000601600 SND1Q7KZF4 910 aaKnown RBP eCLIP12.46□□□□□ -0.41
SYMPK-217ENST00000601600 TRMT44Q8IYL2 757 aaKnown RBP12.46□□□□□ -0.41
SYMPK-217ENST00000601600 LARGE2Q8N3Y3 721 aa12.46□□□□□ -0.41
SYMPK-217ENST00000601600 SMC1BQ8NDV3 1235 aa12.46□□□□□ -0.41
SYMPK-217ENST00000601600 CNKSR1Q969H4 720 aa12.46□□□□□ -0.41
SYMPK-217ENST00000601600 RCAN3Q9UKA8 241 aa12.46□□□□□ -0.41
SYMPK-217ENST00000601600 DICER1Q9UPY3 1922 aaKnown RBP12.46□□□□□ -0.42
SYMPK-217ENST00000601600 ZNF521Q96K83 1311 aa12.45□□□□□ -0.42
SYMPK-217ENST00000601600 NFKBIEO00221 500 aa12.45□□□□□ -0.42
SYMPK-217ENST00000601600 SOGA3Q5TF21 947 aa12.45□□□□□ -0.42
SYMPK-217ENST00000601600 MCM10Q7L590 875 aa12.45□□□□□ -0.42
SYMPK-217ENST00000601600 USP16Q9Y5T5 823 aa12.45□□□□□ -0.42
SYMPK-217ENST00000601600 LTBP3Q9NS15 1303 aa12.44□□□□□ -0.42
SYMPK-217ENST00000601600 RNF223E7ERA6 249 aa12.44□□□□□ -0.42
SYMPK-217ENST00000601600 E9PSI1 815 aa12.44□□□□□ -0.42
SYMPK-217ENST00000601600 KCNQ3O43525 872 aa12.44□□□□□ -0.42
SYMPK-217ENST00000601600 PLA2G2CQ5R387 149 aa12.44□□□□□ -0.42
SYMPK-217ENST00000601600 STYK1Q6J9G0 422 aa12.44□□□□□ -0.42
SYMPK-217ENST00000601600 SIX5Q8N196 739 aa12.44□□□□□ -0.42
SYMPK-217ENST00000601600 DNAJC5GQ8N7S2 189 aa12.44□□□□□ -0.42
SYMPK-217ENST00000601600 PCDHB11Q9Y5F2 797 aa12.44□□□□□ -0.42
SYMPK-217ENST00000601600 DLG5Q8TDM6 1919 aa12.43□□□□□ -0.42
SYMPK-217ENST00000601600 APAF1O14727 1248 aa12.43□□□□□ -0.42
SYMPK-217ENST00000601600 C21orf2O43822 256 aa12.43□□□□□ -0.42
SYMPK-217ENST00000601600 TRIM32Q13049 653 aa12.43□□□□□ -0.42
SYMPK-217ENST00000601600 TAF7Q15545 349 aaPredicted RBP12.43□□□□□ -0.42
SYMPK-217ENST00000601600 SWI5Q1ZZU3 235 aa12.43□□□□□ -0.42
SYMPK-217ENST00000601600 CCDC27Q2M243 656 aa12.43□□□□□ -0.42
SYMPK-217ENST00000601600 NBPF5PQ86XG9 351 aaPredicted RBP12.43□□□□□ -0.42
SYMPK-217ENST00000601600 MASTLQ96GX5 879 aa12.43□□□□□ -0.42
SYMPK-217ENST00000601600 TAOK3Q9H2K8 898 aa12.43□□□□□ -0.42
SYMPK-217ENST00000601600 PCDH10Q9P2E7 1040 aa12.43□□□□□ -0.42
SYMPK-217ENST00000601600 PCDHGA11Q9Y5H2 935 aa12.43□□□□□ -0.42
SYMPK-217ENST00000601600 KDM3BQ7LBC6 1761 aa12.43□□□□□ -0.42
SYMPK-217ENST00000601600 SRGNP10124 158 aa12.42□□□□□ -0.42
SYMPK-217ENST00000601600 ATP2B4P23634 1241 aa12.42□□□□□ -0.42
SYMPK-217ENST00000601600 PRELPP51888 382 aa12.42□□□□□ -0.42
SYMPK-217ENST00000601600 KCNC4Q03721 635 aa12.42□□□□□ -0.42
SYMPK-217ENST00000601600 FOXD4L5Q5VV16 416 aaPredicted RBP12.42□□□□□ -0.42
SYMPK-217ENST00000601600 PRPF40BQ6NWY9 871 aaKnown RBP12.42□□□□□ -0.42
SYMPK-217ENST00000601600 TPTE2Q6XPS3 522 aa12.42□□□□□ -0.42
SYMPK-217ENST00000601600 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.42□□□□□ -0.42
SYMPK-217ENST00000601600 FOXD4L4Q8WXT5 416 aaPredicted RBP12.42□□□□□ -0.42
SYMPK-217ENST00000601600 SLX4Q8IY92 1834 aa12.41□□□□□ -0.42
SYMPK-217ENST00000601600 PRAMEF22A3QJZ6 481 aa12.41□□□□□ -0.42
SYMPK-217ENST00000601600 ZBTB24O43167 697 aaPredicted RBP12.41□□□□□ -0.42
SYMPK-217ENST00000601600 ITGBL1O95965 494 aaPredicted RBP12.41□□□□□ -0.42
SYMPK-217ENST00000601600 PIP4K2AP48426 406 aaPredicted RBP12.41□□□□□ -0.42
SYMPK-217ENST00000601600 RRP1P56182 461 aaKnown RBP12.41□□□□□ -0.42
SYMPK-217ENST00000601600 SKOR1P84550 965 aa12.41□□□□□ -0.42
SYMPK-217ENST00000601600 SLFN5Q08AF3 891 aa12.41□□□□□ -0.42
SYMPK-217ENST00000601600 DCTN1Q14203 1278 aa12.41□□□□□ -0.42
SYMPK-217ENST00000601600 CCDC102BQ68D86 513 aa12.41□□□□□ -0.42
SYMPK-217ENST00000601600 CCDC146Q8IYE0 955 aa12.41□□□□□ -0.42
SYMPK-217ENST00000601600 KLRG1Q96E93 195 aa12.41□□□□□ -0.42
SYMPK-217ENST00000601600 CDV3Q9UKY7 258 aaKnown RBP12.41□□□□□ -0.42
SYMPK-217ENST00000601600 MAPK8IP3Q9UPT6 1336 aa12.4□□□□□ -0.42
SYMPK-217ENST00000601600 NPR1P16066 1061 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms