RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 EFCAB6Q5THR3 1501 aa6.12□□□□□ -1.43
HERC1-211ENST00000560983 MSL1Q68DK7 614 aa6.12□□□□□ -1.43
HERC1-211ENST00000560983 KRT27Q7Z3Y8 459 aa6.12□□□□□ -1.43
HERC1-211ENST00000560983 TXNRD3Q86VQ6 643 aa6.12□□□□□ -1.43
HERC1-211ENST00000560983 UNC5CLQ8IV45 518 aa6.12□□□□□ -1.43
HERC1-211ENST00000560983 COL26A1Q96A83 441 aa6.12□□□□□ -1.43
HERC1-211ENST00000560983 NOVA2Q9UNW9 492 aaKnown RBP6.12□□□□□ -1.43
HERC1-211ENST00000560983 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.11□□□□□ -1.43
HERC1-211ENST00000560983 RALGAPBQ86X10 1494 aa6.11□□□□□ -1.43
HERC1-211ENST00000560983 TARSP26639 723 aaKnown RBP6.11□□□□□ -1.43
HERC1-211ENST00000560983 NRG1Q02297 640 aaPredicted RBP6.11□□□□□ -1.43
HERC1-211ENST00000560983 TBC1D8BQ0IIM8 1120 aa6.11□□□□□ -1.43
HERC1-211ENST00000560983 FAM35AQ86V20 835 aa6.11□□□□□ -1.43
HERC1-211ENST00000560983 IGFLR1Q9H665 355 aa6.11□□□□□ -1.43
HERC1-211ENST00000560983 RTCBQ9Y3I0 505 aaKnown RBP6.11□□□□□ -1.43
HERC1-211ENST00000560983 KCNMB2Q9Y691 235 aa6.11□□□□□ -1.43
HERC1-211ENST00000560983 PIK3C2BO00750 1634 aa6.1□□□□□ -1.43
HERC1-211ENST00000560983 CCDC141Q6ZP82 1450 aa6.1□□□□□ -1.43
HERC1-211ENST00000560983 ZFYVE9O95405 1425 aa6.1□□□□□ -1.43
HERC1-211ENST00000560983 DCCP43146 1447 aa6.1□□□□□ -1.43
HERC1-211ENST00000560983 EEA1Q15075 1411 aa6.1□□□□□ -1.43
HERC1-211ENST00000560983 ADAMTS13Q76LX8 1427 aa6.1□□□□□ -1.43
HERC1-211ENST00000560983 PTPRUQ92729 1446 aa6.1□□□□□ -1.43
HERC1-211ENST00000560983 SASH3O75995 380 aa6.1□□□□□ -1.43
HERC1-211ENST00000560983 EZH2Q15910 746 aaKnown RBP6.1□□□□□ -1.43
HERC1-211ENST00000560983 SHISA2Q6UWI4 295 aa6.1□□□□□ -1.43
HERC1-211ENST00000560983 FBXO11Q86XK2 927 aa6.1□□□□□ -1.43
HERC1-211ENST00000560983 CAMKK2Q96RR4 588 aa6.1□□□□□ -1.43
HERC1-211ENST00000560983 ORAI2Q96SN7 254 aa6.1□□□□□ -1.43
HERC1-211ENST00000560983 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.1□□□□□ -1.43
HERC1-211ENST00000560983 SLC52A1Q9NWF4 448 aa6.1□□□□□ -1.43
HERC1-211ENST00000560983 TLR7Q9NYK1 1049 aaKnown RBP6.1□□□□□ -1.43
HERC1-211ENST00000560983 PIK3R4Q99570 1358 aa6.09□□□□□ -1.43
HERC1-211ENST00000560983 RARAP10276 462 aa6.09□□□□□ -1.43
HERC1-211ENST00000560983 CPB1P15086 417 aa6.09□□□□□ -1.43
HERC1-211ENST00000560983 SOX18P35713 384 aa6.09□□□□□ -1.43
HERC1-211ENST00000560983 ZMYM1Q5SVZ6 1142 aa6.09□□□□□ -1.43
HERC1-211ENST00000560983 KRT25Q7Z3Z0 450 aa6.09□□□□□ -1.43
HERC1-211ENST00000560983 TREML1Q86YW5 311 aa6.09□□□□□ -1.43
HERC1-211ENST00000560983 ETFBKMTQ8IXQ9 262 aa6.09□□□□□ -1.43
HERC1-211ENST00000560983 DMRTC2Q8IXT2 367 aaPredicted RBP6.09□□□□□ -1.43
HERC1-211ENST00000560983 VTI1AQ96AJ9 217 aa6.09□□□□□ -1.43
HERC1-211ENST00000560983 RFX1P22670 979 aa6.08□□□□□ -1.44
HERC1-211ENST00000560983 VPS72Q15906 364 aa6.08□□□□□ -1.44
HERC1-211ENST00000560983 CDCA8Q53HL2 280 aa6.08□□□□□ -1.44
HERC1-211ENST00000560983 FAM26DQ5JW98 314 aa6.08□□□□□ -1.44
HERC1-211ENST00000560983 PRSS36Q5K4E3 855 aa6.08□□□□□ -1.44
HERC1-211ENST00000560983 KRTAP4-8Q9BYQ9 185 aa6.08□□□□□ -1.44
HERC1-211ENST00000560983 SAP130Q9H0E3 1048 aa6.08□□□□□ -1.44
HERC1-211ENST00000560983 USP20Q9Y2K6 914 aa6.08□□□□□ -1.44
HERC1-211ENST00000560983 UNC13BO14795 1591 aa6.08□□□□□ -1.44
HERC1-211ENST00000560983 GLI3P10071 1580 aa6.08□□□□□ -1.44
HERC1-211ENST00000560983 MYOM2P54296 1465 aa6.08□□□□□ -1.44
HERC1-211ENST00000560983 NOS1P29475 1434 aa6.08□□□□□ -1.44
HERC1-211ENST00000560983 NINLQ9Y2I6 1382 aa6.07□□□□□ -1.44
HERC1-211ENST00000560983 CHD2O14647 1828 aaKnown RBP6.07□□□□□ -1.44
HERC1-211ENST00000560983 TNFRSF10BO14763 440 aa6.07□□□□□ -1.44
HERC1-211ENST00000560983 KCNQ2O43526 872 aa6.07□□□□□ -1.44
HERC1-211ENST00000560983 XYLBO75191 536 aa6.07□□□□□ -1.44
HERC1-211ENST00000560983 DEAF1O75398 565 aaPredicted RBP6.07□□□□□ -1.44
HERC1-211ENST00000560983 ATG7O95352 703 aa6.07□□□□□ -1.44
HERC1-211ENST00000560983 STK32AQ8WU08 396 aa6.07□□□□□ -1.44
HERC1-211ENST00000560983 PRIMPOLQ96LW4 560 aa6.07□□□□□ -1.44
HERC1-211ENST00000560983 SPON1Q9HCB6 807 aa6.07□□□□□ -1.44
HERC1-211ENST00000560983 CXXC1Q9P0U4 656 aaPredicted RBP6.07□□□□□ -1.44
HERC1-211ENST00000560983 PPP1R1BQ9UD71 204 aaPredicted RBP6.07□□□□□ -1.44
HERC1-211ENST00000560983 SLIT2O94813 1529 aa6.07□□□□□ -1.44
HERC1-211ENST00000560983 RIMS2Q9UQ26 1411 aa6.07□□□□□ -1.44
HERC1-211ENST00000560983 DLL1O00548 723 aa6.06□□□□□ -1.44
HERC1-211ENST00000560983 MMP20O60882 483 aa6.06□□□□□ -1.44
HERC1-211ENST00000560983 MLLT1Q03111 559 aaPredicted RBP6.06□□□□□ -1.44
HERC1-211ENST00000560983 TRIP4Q15650 581 aaPredicted RBP6.06□□□□□ -1.44
HERC1-211ENST00000560983 C16orf46Q6P387 395 aa6.06□□□□□ -1.44
HERC1-211ENST00000560983 ELMSAN1Q6PJG2 1045 aa6.06□□□□□ -1.44
HERC1-211ENST00000560983 WFDC8Q8IUA0 241 aa6.06□□□□□ -1.44
HERC1-211ENST00000560983 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.06□□□□□ -1.44
HERC1-211ENST00000560983 SMG9Q9H0W8 520 aaKnown RBP6.06□□□□□ -1.44
HERC1-211ENST00000560983 C1orf167Q5SNV9 1468 aa6.06□□□□□ -1.44
HERC1-211ENST00000560983 DISP2A7MBM2 1401 aa6.06□□□□□ -1.44
HERC1-211ENST00000560983 LOC102724428A0A0B4J2F2 783 aa6.05□□□□□ -1.44
HERC1-211ENST00000560983 PRMT3O60678 531 aa6.05□□□□□ -1.44
HERC1-211ENST00000560983 ARID4AP29374 1257 aaPredicted RBP6.05□□□□□ -1.44
HERC1-211ENST00000560983 SIK1P57059 783 aa6.05□□□□□ -1.44
HERC1-211ENST00000560983 IGF2-ASQ6U949 168 aa6.05□□□□□ -1.44
HERC1-211ENST00000560983 RGL4Q8IZJ4 473 aa6.05□□□□□ -1.44
HERC1-211ENST00000560983 ADGRL3Q9HAR2 1447 aa6.05□□□□□ -1.44
HERC1-211ENST00000560983 FYCO1Q9BQS8 1478 aa6.04□□□□□ -1.44
HERC1-211ENST00000560983 GOLGB1Q14789 3259 aaKnown RBP6.04□□□□□ -1.44
HERC1-211ENST00000560983 BRD2P25440 801 aaKnown RBP6.04□□□□□ -1.44
HERC1-211ENST00000560983 NOS3P29474 1203 aa6.04□□□□□ -1.44
HERC1-211ENST00000560983 ARTNQ5T4W7 220 aa6.04□□□□□ -1.44
HERC1-211ENST00000560983 TMEM164Q5U3C3 297 aa6.04□□□□□ -1.44
HERC1-211ENST00000560983 CAPN12Q6ZSI9 719 aa6.04□□□□□ -1.44
HERC1-211ENST00000560983 NLRP13Q86W25 1043 aa6.04□□□□□ -1.44
HERC1-211ENST00000560983 CMTR1Q8N1G2 835 aaKnown RBP6.04□□□□□ -1.44
HERC1-211ENST00000560983 WFDC12Q8WWY7 111 aa6.04□□□□□ -1.44
HERC1-211ENST00000560983 CLP1Q92989 425 aaKnown RBP6.04□□□□□ -1.44
HERC1-211ENST00000560983 PLD4Q96BZ4 506 aa6.04□□□□□ -1.44
HERC1-211ENST00000560983 SRA1Q9HD15 236 aaKnown RBP6.04□□□□□ -1.44
HERC1-211ENST00000560983 ADGRB3O60242 1522 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms