RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 SSFA2P28290 1259 aa6.32□□□□□ -1.4
VTI1B-203ENST00000554636 DNM1Q05193 864 aaKnown RBP6.32□□□□□ -1.4
VTI1B-203ENST00000554636 PCSK7Q16549 785 aa6.32□□□□□ -1.4
VTI1B-203ENST00000554636 NLRP13Q86W25 1043 aa6.32□□□□□ -1.4
VTI1B-203ENST00000554636 THEMISQ8N1K5 641 aaPredicted RBP6.32□□□□□ -1.4
VTI1B-203ENST00000554636 NUDT16Q96DE0 195 aaKnown RBP6.32□□□□□ -1.4
VTI1B-203ENST00000554636 SCAF11Q99590 1463 aaKnown RBP6.32□□□□□ -1.4
VTI1B-203ENST00000554636 E9PCH4 1651 aa6.32□□□□□ -1.4
VTI1B-203ENST00000554636 STRCP1A6NGW2 1772 aa6.31□□□□□ -1.4
VTI1B-203ENST00000554636 CPS1P31327 1500 aa6.31□□□□□ -1.4
VTI1B-203ENST00000554636 A0A0A0MRY4 1105 aa6.31□□□□□ -1.4
VTI1B-203ENST00000554636 A6NHS1 94 aa6.31□□□□□ -1.4
VTI1B-203ENST00000554636 GHRHP01286 108 aa6.31□□□□□ -1.4
VTI1B-203ENST00000554636 BAG6P46379 1132 aa6.31□□□□□ -1.4
VTI1B-203ENST00000554636 NRLP54845 237 aa6.31□□□□□ -1.4
VTI1B-203ENST00000554636 ZNF211Q13398 564 aaPredicted RBP6.31□□□□□ -1.4
VTI1B-203ENST00000554636 AAMPQ13685 434 aa6.31□□□□□ -1.4
VTI1B-203ENST00000554636 GDF6Q6KF10 455 aaPredicted RBP6.31□□□□□ -1.4
VTI1B-203ENST00000554636 ANKLE2Q86XL3 938 aa6.31□□□□□ -1.4
VTI1B-203ENST00000554636 EDEM1Q92611 657 aa6.31□□□□□ -1.4
VTI1B-203ENST00000554636 PLD4Q96BZ4 506 aa6.31□□□□□ -1.4
VTI1B-203ENST00000554636 C11orf16Q9NQ32 467 aa6.31□□□□□ -1.4
VTI1B-203ENST00000554636 TMEM2Q9UHN6 1383 aa6.31□□□□□ -1.4
VTI1B-203ENST00000554636 MYO5BQ9ULV0 1848 aa6.3□□□□□ -1.4
VTI1B-203ENST00000554636 LOC102724428A0A0B4J2F2 783 aa6.3□□□□□ -1.4
VTI1B-203ENST00000554636 LTKP29376 864 aa6.3□□□□□ -1.4
VTI1B-203ENST00000554636 SIK1P57059 783 aa6.3□□□□□ -1.4
VTI1B-203ENST00000554636 RAC1P63000 192 aa6.3□□□□□ -1.4
VTI1B-203ENST00000554636 C8orf34Q49A92 452 aa6.3□□□□□ -1.4
VTI1B-203ENST00000554636 PHLDB3Q6NSJ2 640 aa6.3□□□□□ -1.4
VTI1B-203ENST00000554636 ZNF438Q7Z4V0 828 aa6.3□□□□□ -1.4
VTI1B-203ENST00000554636 FNDC3AQ9Y2H6 1198 aaKnown RBP6.3□□□□□ -1.4
VTI1B-203ENST00000554636 TMEM131LA2VDJ0 1609 aa6.29□□□□□ -1.4
VTI1B-203ENST00000554636 CYP2E1P05181 493 aaPredicted RBP6.29□□□□□ -1.4
VTI1B-203ENST00000554636 FURINP09958 794 aa6.29□□□□□ -1.4
VTI1B-203ENST00000554636 ITGAEP38570 1179 aa6.29□□□□□ -1.4
VTI1B-203ENST00000554636 EIF1AXP47813 144 aaKnown RBP6.29□□□□□ -1.4
VTI1B-203ENST00000554636 NAIPQ13075 1403 aa6.29□□□□□ -1.4
VTI1B-203ENST00000554636 IDI1Q13907 227 aa6.29□□□□□ -1.4
VTI1B-203ENST00000554636 SUZ12Q15022 739 aaKnown RBP6.29□□□□□ -1.4
VTI1B-203ENST00000554636 NOM1Q5C9Z4 860 aaKnown RBP6.29□□□□□ -1.4
VTI1B-203ENST00000554636 COL13A1Q5TAT6 717 aaPredicted RBP6.29□□□□□ -1.4
VTI1B-203ENST00000554636 TTC39BQ5VTQ0 682 aaPredicted RBP6.29□□□□□ -1.4
VTI1B-203ENST00000554636 MSL1Q68DK7 614 aa6.29□□□□□ -1.4
VTI1B-203ENST00000554636 SHISA2Q6UWI4 295 aa6.29□□□□□ -1.4
VTI1B-203ENST00000554636 ERICH6Q7L0X2 663 aa6.29□□□□□ -1.4
VTI1B-203ENST00000554636 WFDC8Q8IUA0 241 aa6.29□□□□□ -1.4
VTI1B-203ENST00000554636 RBSNQ9H1K0 784 aa6.29□□□□□ -1.4
VTI1B-203ENST00000554636 FRRS1LQ9P0K9 344 aa6.29□□□□□ -1.4
VTI1B-203ENST00000554636 TMEM63CQ9P1W3 806 aa6.29□□□□□ -1.4
VTI1B-203ENST00000554636 ALKQ9UM73 1620 aa6.28□□□□□ -1.4
VTI1B-203ENST00000554636 HFM1A2PYH4 1435 aa6.28□□□□□ -1.4
VTI1B-203ENST00000554636 ZFYVE9O95405 1425 aa6.28□□□□□ -1.4
VTI1B-203ENST00000554636 GATA4P43694 442 aa6.28□□□□□ -1.4
VTI1B-203ENST00000554636 ATP11AP98196 1134 aa6.28□□□□□ -1.4
VTI1B-203ENST00000554636 DOC2BQ14184 412 aa6.28□□□□□ -1.4
VTI1B-203ENST00000554636 GRIK5Q16478 980 aa6.28□□□□□ -1.4
VTI1B-203ENST00000554636 RETREG2Q8NC44 543 aa6.28□□□□□ -1.4
VTI1B-203ENST00000554636 ABI2Q9NYB9 513 aaPredicted RBP6.28□□□□□ -1.4
VTI1B-203ENST00000554636 KANSL3Q9P2N6 904 aa6.28□□□□□ -1.4
VTI1B-203ENST00000554636 TRIM33Q9UPN9 1127 aa6.28□□□□□ -1.4
VTI1B-203ENST00000554636 NUP155O75694 1391 aa6.28□□□□□ -1.4
VTI1B-203ENST00000554636 SPHKAPQ2M3C7 1700 aa6.28□□□□□ -1.4
VTI1B-203ENST00000554636 LRRC7Q96NW7 1537 aa6.27□□□□□ -1.41
VTI1B-203ENST00000554636 PDGFAP04085 211 aa6.27□□□□□ -1.41
VTI1B-203ENST00000554636 SOX18P35713 384 aa6.27□□□□□ -1.41
VTI1B-203ENST00000554636 HYAL2Q12891 473 aa6.27□□□□□ -1.41
VTI1B-203ENST00000554636 TXNDC2Q86VQ3 553 aa6.27□□□□□ -1.41
VTI1B-203ENST00000554636 FMR1NBQ8N0W7 255 aaPredicted RBP6.27□□□□□ -1.41
VTI1B-203ENST00000554636 TTC16Q8NEE8 873 aa6.27□□□□□ -1.41
VTI1B-203ENST00000554636 OR13H1Q8NG92 308 aa6.27□□□□□ -1.41
VTI1B-203ENST00000554636 ELP3Q9H9T3 547 aa6.27□□□□□ -1.41
VTI1B-203ENST00000554636 SLC52A1Q9NWF4 448 aa6.27□□□□□ -1.41
VTI1B-203ENST00000554636 USP21Q9UK80 565 aa6.27□□□□□ -1.41
VTI1B-203ENST00000554636 POLIQ9UNA4 740 aa6.27□□□□□ -1.41
VTI1B-203ENST00000554636 MTMR7Q9Y216 660 aa6.27□□□□□ -1.41
VTI1B-203ENST00000554636 NWD1Q149M9 1564 aa6.27□□□□□ -1.41
VTI1B-203ENST00000554636 ELNP15502 786 aa6.26□□□□□ -1.41
VTI1B-203ENST00000554636 SELPP16109 830 aa6.26□□□□□ -1.41
VTI1B-203ENST00000554636 CDC25BP30305 580 aa6.26□□□□□ -1.41
VTI1B-203ENST00000554636 NCAPG2Q86XI2 1143 aa6.26□□□□□ -1.41
VTI1B-203ENST00000554636 SPACA7Q96KW9 195 aa6.26□□□□□ -1.41
VTI1B-203ENST00000554636 NACC1Q96RE7 527 aa6.26□□□□□ -1.41
VTI1B-203ENST00000554636 LACRTQ9GZZ8 138 aa6.26□□□□□ -1.41
VTI1B-203ENST00000554636 GGNBP2Q9H3C7 697 aa6.26□□□□□ -1.41
VTI1B-203ENST00000554636 USTQ9Y2C2 406 aa6.26□□□□□ -1.41
VTI1B-203ENST00000554636 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.26□□□□□ -1.41
VTI1B-203ENST00000554636 XIRP1Q702N8 1843 aaKnown RBP6.26□□□□□ -1.41
VTI1B-203ENST00000554636 RIMS2Q9UQ26 1411 aa6.25□□□□□ -1.41
VTI1B-203ENST00000554636 TRPM2O94759 1503 aa6.25□□□□□ -1.41
VTI1B-203ENST00000554636 CLTCL1P53675 1640 aa6.25□□□□□ -1.41
VTI1B-203ENST00000554636 PCSK2P16519 638 aa6.25□□□□□ -1.41
VTI1B-203ENST00000554636 SERPINB4P48594 390 aa6.25□□□□□ -1.41
VTI1B-203ENST00000554636 CEP135Q66GS9 1140 aa6.25□□□□□ -1.41
VTI1B-203ENST00000554636 IL22RA1Q8N6P7 574 aa6.25□□□□□ -1.41
VTI1B-203ENST00000554636 RASSF4Q9H2L5 321 aa6.25□□□□□ -1.41
VTI1B-203ENST00000554636 CNTN3Q9P232 1028 aa6.25□□□□□ -1.41
VTI1B-203ENST00000554636 EID1Q9Y6B2 187 aa6.25□□□□□ -1.41
VTI1B-203ENST00000554636 PLEKHG1Q9ULL1 1385 aa6.25□□□□□ -1.41
VTI1B-203ENST00000554636 H3BRB1 525 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms