RNA–Protein interactions for RNA: ENST00000543048.5

TNFRSF1A-214, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-214ENST00000543048 FTSJ3Q8IY81 847 aaKnown RBP12.09□□□□□ -0.47
TNFRSF1A-214ENST00000543048 TBC1D22AQ8WUA7 517 aa12.09□□□□□ -0.47
TNFRSF1A-214ENST00000543048 IQSEC3Q9UPP2 1182 aaPredicted RBP12.09□□□□□ -0.47
TNFRSF1A-214ENST00000543048 MS4A1P11836 297 aa12.08□□□□□ -0.48
TNFRSF1A-214ENST00000543048 MAP2K2P36507 400 aa12.08□□□□□ -0.48
TNFRSF1A-214ENST00000543048 RBM5P52756 815 aaKnown RBP eCLIP12.08□□□□□ -0.48
TNFRSF1A-214ENST00000543048 MAP2K1Q02750 393 aaPredicted RBP12.08□□□□□ -0.48
TNFRSF1A-214ENST00000543048 CHAF1AQ13111 956 aaPredicted RBP12.08□□□□□ -0.48
TNFRSF1A-214ENST00000543048 GRM1Q13255 1194 aa12.08□□□□□ -0.48
TNFRSF1A-214ENST00000543048 GSE1Q14687 1217 aa12.08□□□□□ -0.48
TNFRSF1A-214ENST00000543048 ATP2B3Q16720 1220 aa12.08□□□□□ -0.48
TNFRSF1A-214ENST00000543048 APOBEC3FQ8IUX4 373 aaKnown RBP12.08□□□□□ -0.48
TNFRSF1A-214ENST00000543048 PRMT6Q96LA8 375 aaPredicted RBP12.08□□□□□ -0.48
TNFRSF1A-214ENST00000543048 GNL3LQ9NVN8 582 aaKnown RBP12.08□□□□□ -0.48
TNFRSF1A-214ENST00000543048 WBP1LQ9NX94 342 aa12.08□□□□□ -0.48
TNFRSF1A-214ENST00000543048 TTF2Q9UNY4 1162 aaKnown RBP12.08□□□□□ -0.48
TNFRSF1A-214ENST00000543048 SCAF8Q9UPN6 1271 aaKnown RBP12.08□□□□□ -0.48
TNFRSF1A-214ENST00000543048 AKAP11Q9UKA4 1901 aa12.07□□□□□ -0.48
TNFRSF1A-214ENST00000543048 ZBTB7BO15156 539 aaPredicted RBP12.07□□□□□ -0.48
TNFRSF1A-214ENST00000543048 GALR2O43603 387 aaPredicted RBP12.07□□□□□ -0.48
TNFRSF1A-214ENST00000543048 MYO1BO43795 1136 aa12.07□□□□□ -0.48
TNFRSF1A-214ENST00000543048 ATP8B2P98198 1209 aa12.07□□□□□ -0.48
TNFRSF1A-214ENST00000543048 G3BP1Q13283 466 aaKnown RBP eCLIP12.07□□□□□ -0.48
TNFRSF1A-214ENST00000543048 ITPRIPQ8IWB1 547 aa12.07□□□□□ -0.48
TNFRSF1A-214ENST00000543048 MRIQ9BWK5 157 aa12.07□□□□□ -0.48
TNFRSF1A-214ENST00000543048 SERPINA10Q9UK55 444 aa12.07□□□□□ -0.48
TNFRSF1A-214ENST00000543048 CIZ1Q9ULV3 898 aaPredicted RBP12.07□□□□□ -0.48
TNFRSF1A-214ENST00000543048 AKAP2Q9Y2D5 859 aa12.07□□□□□ -0.48
TNFRSF1A-214ENST00000543048 ARAP2Q8WZ64 1704 aa12.06□□□□□ -0.48
TNFRSF1A-214ENST00000543048 PNMA6EA0A0J9YXQ4 647 aa12.06□□□□□ -0.48
TNFRSF1A-214ENST00000543048 AOC2O75106 756 aa12.06□□□□□ -0.48
TNFRSF1A-214ENST00000543048 RLBP1P12271 317 aa12.06□□□□□ -0.48
TNFRSF1A-214ENST00000543048 NF2P35240 595 aa12.06□□□□□ -0.48
TNFRSF1A-214ENST00000543048 TIMM10P62072 90 aa12.06□□□□□ -0.48
TNFRSF1A-214ENST00000543048 FKBP1BP68106 108 aa12.06□□□□□ -0.48
TNFRSF1A-214ENST00000543048 HDLBPQ00341 1268 aaKnown RBP12.06□□□□□ -0.48
TNFRSF1A-214ENST00000543048 PRAMEF18Q5VWM3 479 aa12.06□□□□□ -0.48
TNFRSF1A-214ENST00000543048 RGMBQ6NW40 437 aa12.06□□□□□ -0.48
TNFRSF1A-214ENST00000543048 CCDC102AQ96A19 550 aa12.06□□□□□ -0.48
TNFRSF1A-214ENST00000543048 AIDAQ96BJ3 306 aa12.06□□□□□ -0.48
TNFRSF1A-214ENST00000543048 KIF12Q96FN5 646 aa12.06□□□□□ -0.48
TNFRSF1A-214ENST00000543048 SUGT1Q9Y2Z0 365 aa12.06□□□□□ -0.48
TNFRSF1A-214ENST00000543048 PCDHAC2Q9Y5I4 1007 aa12.06□□□□□ -0.48
TNFRSF1A-214ENST00000543048 AK9Q5TCS8 1911 aa12.05□□□□□ -0.48
TNFRSF1A-214ENST00000543048 ZNF157P51786 506 aaPredicted RBP12.05□□□□□ -0.48
TNFRSF1A-214ENST00000543048 TFCP2Q12800 502 aa12.05□□□□□ -0.48
TNFRSF1A-214ENST00000543048 WDR66Q8TBY9 1149 aa12.05□□□□□ -0.48
TNFRSF1A-214ENST00000543048 MS4A3Q96HJ5 214 aa12.05□□□□□ -0.48
TNFRSF1A-214ENST00000543048 DEFB129Q9H1M3 183 aa12.05□□□□□ -0.48
TNFRSF1A-214ENST00000543048 MYH2Q9UKX2 1941 aa12.04□□□□□ -0.48
TNFRSF1A-214ENST00000543048 UBE2Q2LH0YL09 131 aa12.04□□□□□ -0.48
TNFRSF1A-214ENST00000543048 FOXN1O15353 648 aa12.04□□□□□ -0.48
TNFRSF1A-214ENST00000543048 PYGBP11216 843 aa12.04□□□□□ -0.48
TNFRSF1A-214ENST00000543048 CRKP46108 304 aa12.04□□□□□ -0.48
TNFRSF1A-214ENST00000543048 CTCFP49711 727 aaPredicted RBP12.04□□□□□ -0.48
TNFRSF1A-214ENST00000543048 TTLL12Q14166 644 aaPredicted RBP12.04□□□□□ -0.48
TNFRSF1A-214ENST00000543048 GRIK5Q16478 980 aa12.04□□□□□ -0.48
TNFRSF1A-214ENST00000543048 PANK1Q8TE04 598 aa12.04□□□□□ -0.48
TNFRSF1A-214ENST00000543048 SSH3Q8TE77 659 aa12.04□□□□□ -0.48
TNFRSF1A-214ENST00000543048 BEGAINQ9BUH8 593 aa12.04□□□□□ -0.48
TNFRSF1A-214ENST00000543048 ZNF70Q9UC06 446 aaPredicted RBP12.04□□□□□ -0.48
TNFRSF1A-214ENST00000543048 RCAN3Q9UKA8 241 aa12.04□□□□□ -0.48
TNFRSF1A-214ENST00000543048 DENND2AQ9ULE3 1009 aa12.04□□□□□ -0.48
TNFRSF1A-214ENST00000543048 PAPPA2Q9BXP8 1791 aa12.03□□□□□ -0.48
TNFRSF1A-214ENST00000543048 CLRN2A0PK11 232 aa12.03□□□□□ -0.48
TNFRSF1A-214ENST00000543048 SEMA3EO15041 775 aa12.03□□□□□ -0.48
TNFRSF1A-214ENST00000543048 MAP3K13O43283 966 aa12.03□□□□□ -0.48
TNFRSF1A-214ENST00000543048 ADORA1P30542 326 aa12.03□□□□□ -0.48
TNFRSF1A-214ENST00000543048 PHKA1P46020 1223 aa12.03□□□□□ -0.48
TNFRSF1A-214ENST00000543048 NOGQ13253 232 aa12.03□□□□□ -0.48
TNFRSF1A-214ENST00000543048 SUPT20HL1Q3ZLR7 823 aa12.03□□□□□ -0.48
TNFRSF1A-214ENST00000543048 CCDC102BQ68D86 513 aa12.03□□□□□ -0.48
TNFRSF1A-214ENST00000543048 ARMC9Q7Z3E5 817 aa12.03□□□□□ -0.48
TNFRSF1A-214ENST00000543048 TEKT1Q969V4 418 aa12.03□□□□□ -0.48
TNFRSF1A-214ENST00000543048 XAGE2Q96GT9 111 aa12.03□□□□□ -0.48
TNFRSF1A-214ENST00000543048 NEUROD6Q96NK8 337 aa12.03□□□□□ -0.48
TNFRSF1A-214ENST00000543048 TDRD3Q9H7E2 651 aaKnown RBP12.03□□□□□ -0.48
TNFRSF1A-214ENST00000543048 VEZTQ9HBM0 779 aa12.03□□□□□ -0.48
TNFRSF1A-214ENST00000543048 PPP2R3BQ9Y5P8 575 aa12.03□□□□□ -0.48
TNFRSF1A-214ENST00000543048 MAST3O60307 1309 aa12.03□□□□□ -0.48
TNFRSF1A-214ENST00000543048 THSD7BQ9C0I4 1608 aa12.02□□□□□ -0.49
TNFRSF1A-214ENST00000543048 A0A1B0GUL7 405 aa12.02□□□□□ -0.49
TNFRSF1A-214ENST00000543048 FAM155AB1AL88 458 aaPredicted RBP12.02□□□□□ -0.49
TNFRSF1A-214ENST00000543048 COL13A1Q5TAT6 717 aaPredicted RBP12.02□□□□□ -0.49
TNFRSF1A-214ENST00000543048 HHIPL2Q6UWX4 724 aa12.02□□□□□ -0.49
TNFRSF1A-214ENST00000543048 MOB2Q70IA6 237 aa12.02□□□□□ -0.49
TNFRSF1A-214ENST00000543048 ZDHHC15Q96MV8 337 aa12.02□□□□□ -0.49
TNFRSF1A-214ENST00000543048 C1orf115Q9H7X2 142 aa12.02□□□□□ -0.49
TNFRSF1A-214ENST00000543048 AOX1Q06278 1338 aa12.02□□□□□ -0.49
TNFRSF1A-214ENST00000543048 COL1A1P02452 1464 aaPredicted RBP12.02□□□□□ -0.49
TNFRSF1A-214ENST00000543048 CASP8AP2Q9UKL3 1982 aa12.01□□□□□ -0.49
TNFRSF1A-214ENST00000543048 PPP1R12BO60237 982 aaPredicted RBP12.01□□□□□ -0.49
TNFRSF1A-214ENST00000543048 SURF6O75683 361 aaKnown RBP12.01□□□□□ -0.49
TNFRSF1A-214ENST00000543048 KIF23Q02241 960 aaPredicted RBP12.01□□□□□ -0.49
TNFRSF1A-214ENST00000543048 TNFAIP1Q13829 316 aa12.01□□□□□ -0.49
TNFRSF1A-214ENST00000543048 PRKG1Q13976 671 aa12.01□□□□□ -0.49
TNFRSF1A-214ENST00000543048 RASA3Q14644 834 aa12.01□□□□□ -0.49
TNFRSF1A-214ENST00000543048 MVPQ14764 893 aaKnown RBP12.01□□□□□ -0.49
TNFRSF1A-214ENST00000543048 GORABQ5T7V8 394 aa12.01□□□□□ -0.49
TNFRSF1A-214ENST00000543048 ZGPATQ8N5A5 531 aaKnown RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms