RNA–Protein interactions for RNA: ENST00000527189.5

CAPN1-207, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 558 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-207ENST00000527189 VEZTQ9HBM0 779 aa16.7■□□□□ 0.26
CAPN1-207ENST00000527189 CEP126Q9P2H0 1117 aa16.7■□□□□ 0.26
CAPN1-207ENST00000527189 ANGEL1Q9UNK9 670 aaKnown RBP16.7■□□□□ 0.26
CAPN1-207ENST00000527189 LRRFIP2Q9Y608 721 aaKnown RBP16.7■□□□□ 0.26
CAPN1-207ENST00000527189 ECM29Q5VYK3 1845 aa16.7■□□□□ 0.26
CAPN1-207ENST00000527189 ZBTB22O15209 634 aa16.69■□□□□ 0.26
CAPN1-207ENST00000527189 CHAF1AQ13111 956 aaPredicted RBP16.69■□□□□ 0.26
CAPN1-207ENST00000527189 RASA3Q14644 834 aa16.69■□□□□ 0.26
CAPN1-207ENST00000527189 PRPF38BQ5VTL8 546 aaKnown RBP16.69■□□□□ 0.26
CAPN1-207ENST00000527189 MIER1Q8N108 512 aa16.69■□□□□ 0.26
CAPN1-207ENST00000527189 MEIS3Q99687 375 aa16.69■□□□□ 0.26
CAPN1-207ENST00000527189 COPRSQ9NQ92 184 aa16.69■□□□□ 0.26
CAPN1-207ENST00000527189 ZNF70Q9UC06 446 aaPredicted RBP16.69■□□□□ 0.26
CAPN1-207ENST00000527189 IQSEC3Q9UPP2 1182 aaPredicted RBP16.69■□□□□ 0.26
CAPN1-207ENST00000527189 MAST3O60307 1309 aa16.69■□□□□ 0.26
CAPN1-207ENST00000527189 AKAP11Q9UKA4 1901 aa16.68■□□□□ 0.26
CAPN1-207ENST00000527189 MKI67P46013 3256 aaKnown RBP16.68■□□□□ 0.26
CAPN1-207ENST00000527189 TNNI2P48788 182 aa16.68■□□□□ 0.26
CAPN1-207ENST00000527189 INHBEP58166 350 aa16.68■□□□□ 0.26
CAPN1-207ENST00000527189 SREBF2Q12772 1141 aa16.68■□□□□ 0.26
CAPN1-207ENST00000527189 PRKG1Q13976 671 aa16.68■□□□□ 0.26
CAPN1-207ENST00000527189 ATF7IPQ6VMQ6 1270 aa16.68■□□□□ 0.26
CAPN1-207ENST00000527189 WDR66Q8TBY9 1149 aa16.68■□□□□ 0.26
CAPN1-207ENST00000527189 TEKT1Q969V4 418 aa16.68■□□□□ 0.26
CAPN1-207ENST00000527189 SLC10A4Q96EP9 437 aa16.68■□□□□ 0.26
CAPN1-207ENST00000527189 TDRD3Q9H7E2 651 aaKnown RBP16.68■□□□□ 0.26
CAPN1-207ENST00000527189 IREB2P48200 963 aaKnown RBP16.67■□□□□ 0.26
CAPN1-207ENST00000527189 SOX10P56693 466 aa16.67■□□□□ 0.26
CAPN1-207ENST00000527189 MTX1Q13505 466 aa16.67■□□□□ 0.26
CAPN1-207ENST00000527189 NBPF12Q5TAG4 269 aaPredicted RBP16.67■□□□□ 0.26
CAPN1-207ENST00000527189 SPRYD7Q5W111 196 aa16.67■□□□□ 0.26
CAPN1-207ENST00000527189 ZDHHC15Q96MV8 337 aa16.67■□□□□ 0.26
CAPN1-207ENST00000527189 SIL1Q9H173 461 aa16.67■□□□□ 0.26
CAPN1-207ENST00000527189 GNL3LQ9NVN8 582 aaKnown RBP16.67■□□□□ 0.26
CAPN1-207ENST00000527189 ZBTB48P10074 688 aaPredicted RBP16.66■□□□□ 0.26
CAPN1-207ENST00000527189 TRIM27P14373 513 aa16.66■□□□□ 0.26
CAPN1-207ENST00000527189 ATP2B3Q16720 1220 aa16.66■□□□□ 0.26
CAPN1-207ENST00000527189 NOM1Q5C9Z4 860 aaKnown RBP16.66■□□□□ 0.26
CAPN1-207ENST00000527189 HHIPL2Q6UWX4 724 aa16.66■□□□□ 0.26
CAPN1-207ENST00000527189 AOX1Q06278 1338 aa16.66■□□□□ 0.26
CAPN1-207ENST00000527189 ARAP2Q8WZ64 1704 aa16.65■□□□□ 0.26
CAPN1-207ENST00000527189 SEMA3EO15041 775 aa16.65■□□□□ 0.26
CAPN1-207ENST00000527189 USP2O75604 605 aaPredicted RBP16.65■□□□□ 0.26
CAPN1-207ENST00000527189 BCAR3O75815 825 aa16.65■□□□□ 0.26
CAPN1-207ENST00000527189 HNRNPUQ00839 825 aaKnown RBP eCLIP16.65■□□□□ 0.26
CAPN1-207ENST00000527189 GRIK5Q16478 980 aa16.65■□□□□ 0.26
CAPN1-207ENST00000527189 FKBP1CQ5VVH2 108 aa16.65■□□□□ 0.26
CAPN1-207ENST00000527189 CFHR5Q9BXR6 569 aa16.65■□□□□ 0.26
CAPN1-207ENST00000527189 MANSC4A6NHS7 340 aaPredicted RBP16.64■□□□□ 0.25
CAPN1-207ENST00000527189 SRGAP3O43295 1099 aa16.64■□□□□ 0.25
CAPN1-207ENST00000527189 ALDH1A1P00352 501 aa16.64■□□□□ 0.25
CAPN1-207ENST00000527189 ANKRD13AQ8IZ07 590 aa16.64■□□□□ 0.25
CAPN1-207ENST00000527189 FRAT1Q92837 279 aaPredicted RBP16.64■□□□□ 0.25
CAPN1-207ENST00000527189 TEPSINQ96N21 525 aa16.64■□□□□ 0.25
CAPN1-207ENST00000527189 DENND2AQ9ULE3 1009 aa16.64■□□□□ 0.25
CAPN1-207ENST00000527189 PA2G4Q9UQ80 394 aaKnown RBP16.64■□□□□ 0.25
CAPN1-207ENST00000527189 AKAP2Q9Y2D5 859 aa16.64■□□□□ 0.25
CAPN1-207ENST00000527189 SSC5DA1L4H1 1573 aa16.64■□□□□ 0.25
CAPN1-207ENST00000527189 GNAI2P04899 355 aa16.63■□□□□ 0.25
CAPN1-207ENST00000527189 ZKSCAN2Q63HK3 967 aa16.63■□□□□ 0.25
CAPN1-207ENST00000527189 APOBEC3HQ6NTF7 200 aaKnown RBP16.63■□□□□ 0.25
CAPN1-207ENST00000527189 FAM83AQ86UY5 434 aa16.63■□□□□ 0.25
CAPN1-207ENST00000527189 HOOK2Q96ED9 719 aa16.63■□□□□ 0.25
CAPN1-207ENST00000527189 TMOD2Q9NZR1 351 aa16.63■□□□□ 0.25
CAPN1-207ENST00000527189 FZD1Q9UP38 647 aa16.63■□□□□ 0.25
CAPN1-207ENST00000527189 SALL1Q9NSC2 1324 aa16.63■□□□□ 0.25
CAPN1-207ENST00000527189 TCP10L2B9ZVM9 353 aa16.62■□□□□ 0.25
CAPN1-207ENST00000527189 MKRN3Q13064 507 aaKnown RBP16.62■□□□□ 0.25
CAPN1-207ENST00000527189 WNK4Q96J92 1243 aa16.62■□□□□ 0.25
CAPN1-207ENST00000527189 ZGPATQ8N5A5 531 aaKnown RBP16.61■□□□□ 0.25
CAPN1-207ENST00000527189 CLMNQ96JQ2 1002 aa16.61■□□□□ 0.25
CAPN1-207ENST00000527189 TMEM39BQ9GZU3 492 aa16.61■□□□□ 0.25
CAPN1-207ENST00000527189 TBC1D8O95759 1140 aa16.6■□□□□ 0.25
CAPN1-207ENST00000527189 LDHBP07195 334 aaKnown RBP16.6■□□□□ 0.25
CAPN1-207ENST00000527189 CCDC102BQ68D86 513 aa16.6■□□□□ 0.25
CAPN1-207ENST00000527189 CTU1Q7Z7A3 348 aaKnown RBP16.6■□□□□ 0.25
CAPN1-207ENST00000527189 CLUAP1Q96AJ1 413 aa16.6■□□□□ 0.25
CAPN1-207ENST00000527189 PDS5AQ29RF7 1337 aaKnown RBP16.6■□□□□ 0.25
CAPN1-207ENST00000527189 PHKA1P46020 1223 aa16.59■□□□□ 0.25
CAPN1-207ENST00000527189 TIMM10P62072 90 aa16.59■□□□□ 0.25
CAPN1-207ENST00000527189 MAP3K9P80192 1104 aa16.59■□□□□ 0.25
CAPN1-207ENST00000527189 PKN2Q16513 984 aaKnown RBP16.59■□□□□ 0.25
CAPN1-207ENST00000527189 OTUD7BQ6GQQ9 843 aa16.59■□□□□ 0.25
CAPN1-207ENST00000527189 IFNL1Q8IU54 200 aa16.59■□□□□ 0.25
CAPN1-207ENST00000527189 A0A1B0GUL7 405 aa16.58■□□□□ 0.24
CAPN1-207ENST00000527189 TESPA1A2RU30 521 aaPredicted RBP16.58■□□□□ 0.24
CAPN1-207ENST00000527189 GPR25O00155 361 aa16.58■□□□□ 0.24
CAPN1-207ENST00000527189 TFCP2Q12800 502 aa16.58■□□□□ 0.24
CAPN1-207ENST00000527189 MVPQ14764 893 aaKnown RBP16.58■□□□□ 0.24
CAPN1-207ENST00000527189 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.58■□□□□ 0.24
CAPN1-207ENST00000527189 TMEM57Q8N5G2 664 aa16.58■□□□□ 0.24
CAPN1-207ENST00000527189 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.58■□□□□ 0.24
CAPN1-207ENST00000527189 ZNF296Q8WUU4 475 aaPredicted RBP16.58■□□□□ 0.24
CAPN1-207ENST00000527189 ZBED9Q6R2W3 1325 aa16.58■□□□□ 0.24
CAPN1-207ENST00000527189 SZT2Q5T011 3432 aa16.58■□□□□ 0.24
CAPN1-207ENST00000527189 RPAP1Q9BWH6 1393 aaPredicted RBP16.57■□□□□ 0.24
CAPN1-207ENST00000527189 PRDX5P30044 214 aa16.57■□□□□ 0.24
CAPN1-207ENST00000527189 G3BP1Q13283 466 aaKnown RBP eCLIP16.57■□□□□ 0.24
CAPN1-207ENST00000527189 CDAN1Q8IWY9 1227 aa16.57■□□□□ 0.24
CAPN1-207ENST00000527189 SLF2Q8IX21 1173 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms