RNA–Protein interactions for RNA: ENST00000527189.5

CAPN1-207, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 558 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-207ENST00000527189 NISCHQ9Y2I1 1504 aa33.13■■■□□ 2.89
CAPN1-207ENST00000527189 CCDC180Q9P1Z9 1646 aa29.6■■■□□ 2.33
CAPN1-207ENST00000527189 ABCC9O60706 1549 aa29.55■■■□□ 2.32
CAPN1-207ENST00000527189 DNAJC5BQ9UF47 199 aa28.5■■■□□ 2.15
CAPN1-207ENST00000527189 RB1CC1Q8TDY2 1594 aa28.08■■■□□ 2.09
CAPN1-207ENST00000527189 NACADO15069 1562 aa27.99■■■□□ 2.07
CAPN1-207ENST00000527189 DCAF8L2P0C7V8 631 aa27.86■■■□□ 2.05
CAPN1-207ENST00000527189 MYO15BQ96JP2 1530 aa27.73■■■□□ 2.03
CAPN1-207ENST00000527189 ZCCHC6Q5VYS8 1495 aaKnown RBP27.49■■□□□ 1.99
CAPN1-207ENST00000527189 DCAF1Q9Y4B6 1507 aa27.44■■□□□ 1.98
CAPN1-207ENST00000527189 PABPN1Q86U42 306 aaKnown RBP eCLIP27.37■■□□□ 1.97
CAPN1-207ENST00000527189 UNC13AQ9UPW8 1703 aa27.34■■□□□ 1.97
CAPN1-207ENST00000527189 BICRAQ9NZM4 1560 aa27.21■■□□□ 1.95
CAPN1-207ENST00000527189 SHROOM4Q9ULL8 1493 aa26.99■■□□□ 1.91
CAPN1-207ENST00000527189 SCRIBQ14160 1630 aa26.91■■□□□ 1.9
CAPN1-207ENST00000527189 CC2D2AQ9P2K1 1620 aa26.72■■□□□ 1.87
CAPN1-207ENST00000527189 DNAJC5Q9H3Z4 198 aa26.71■■□□□ 1.87
CAPN1-207ENST00000527189 CECR2Q9BXF3 1484 aa26.69■■□□□ 1.86
CAPN1-207ENST00000527189 EIF4G1Q04637 1599 aaKnown RBP26.54■■□□□ 1.84
CAPN1-207ENST00000527189 NCAPD3P42695 1498 aa25.85■■□□□ 1.73
CAPN1-207ENST00000527189 CUX2O14529 1486 aa25.79■■□□□ 1.72
CAPN1-207ENST00000527189 ATAD2BQ9ULI0 1458 aa25.76■■□□□ 1.71
CAPN1-207ENST00000527189 SMARCA4P51532 1647 aa25.75■■□□□ 1.71
CAPN1-207ENST00000527189 SMARCA2P51531 1590 aa25.72■■□□□ 1.71
CAPN1-207ENST00000527189 BAZ1AQ9NRL2 1556 aaPredicted RBP25.71■■□□□ 1.71
CAPN1-207ENST00000527189 HMGXB3Q12766 1538 aa25.63■■□□□ 1.69
CAPN1-207ENST00000527189 PEG3Q9GZU2 1588 aa25.56■■□□□ 1.68
CAPN1-207ENST00000527189 ERCC6Q03468 1493 aa25.52■■□□□ 1.68
CAPN1-207ENST00000527189 BAZ1BQ9UIG0 1483 aaKnown RBP25.51■■□□□ 1.67
CAPN1-207ENST00000527189 MROH2BQ7Z745 1585 aa25.49■■□□□ 1.67
CAPN1-207ENST00000527189 NESP48681 1621 aa25.25■■□□□ 1.63
CAPN1-207ENST00000527189 LAMC3Q9Y6N6 1575 aa25.19■■□□□ 1.62
CAPN1-207ENST00000527189 THOC2Q8NI27 1593 aaKnown RBP25.17■■□□□ 1.62
CAPN1-207ENST00000527189 TRIM41Q8WV44 630 aa25.16■■□□□ 1.62
CAPN1-207ENST00000527189 WIZO95785 1651 aa25.16■■□□□ 1.62
CAPN1-207ENST00000527189 RSF1Q96T23 1441 aaPredicted RBP25.1■■□□□ 1.61
CAPN1-207ENST00000527189 PDS5BQ9NTI5 1447 aa25.08■■□□□ 1.61
CAPN1-207ENST00000527189 CADPSQ9ULU8 1353 aa25.07■■□□□ 1.6
CAPN1-207ENST00000527189 KIF21AQ7Z4S6 1674 aa24.92■■□□□ 1.58
CAPN1-207ENST00000527189 TOP2AP11388 1531 aaKnown RBP24.91■■□□□ 1.58
CAPN1-207ENST00000527189 CFTRP13569 1480 aa24.83■■□□□ 1.56
CAPN1-207ENST00000527189 MRC2Q9UBG0 1479 aa24.79■■□□□ 1.56
CAPN1-207ENST00000527189 FANCD2Q9BXW9 1451 aa24.74■■□□□ 1.55
CAPN1-207ENST00000527189 CEP164Q9UPV0 1460 aa24.74■■□□□ 1.55
CAPN1-207ENST00000527189 WDR62O43379 1518 aa24.71■■□□□ 1.55
CAPN1-207ENST00000527189 CCDC88BA6NC98 1476 aa24.64■■□□□ 1.54
CAPN1-207ENST00000527189 PRDM2Q13029 1718 aa24.5■■□□□ 1.51
CAPN1-207ENST00000527189 URB2Q14146 1524 aaKnown RBP24.49■■□□□ 1.51
CAPN1-207ENST00000527189 OSCARQ8IYS5 282 aa24.37■■□□□ 1.49
CAPN1-207ENST00000527189 RIMBP3CA6NJZ7 1639 aa24.35■■□□□ 1.49
CAPN1-207ENST00000527189 RIMBP3BA6NNM3 1639 aa24.35■■□□□ 1.49
CAPN1-207ENST00000527189 RIMBP3Q9UFD9 1639 aa24.35■■□□□ 1.49
CAPN1-207ENST00000527189 ABCC8Q09428 1581 aa24.35■■□□□ 1.49
CAPN1-207ENST00000527189 TOPBP1Q92547 1522 aa24.29■■□□□ 1.48
CAPN1-207ENST00000527189 IFT140Q96RY7 1462 aa24.27■■□□□ 1.48
CAPN1-207ENST00000527189 DNMBPQ6XZF7 1577 aa24.22■■□□□ 1.47
CAPN1-207ENST00000527189 ARHGEF11O15085 1522 aa24.14■■□□□ 1.45
CAPN1-207ENST00000527189 ZNF608Q9ULD9 1512 aaPredicted RBP24.14■■□□□ 1.45
CAPN1-207ENST00000527189 SUPT5HO00267 1087 aaKnown RBP24.13■■□□□ 1.45
CAPN1-207ENST00000527189 POLA1P09884 1462 aaPredicted RBP24.06■■□□□ 1.44
CAPN1-207ENST00000527189 TARBP1Q13395 1621 aaKnown RBP24.03■■□□□ 1.44
CAPN1-207ENST00000527189 SOGA1O94964 1423 aa24■■□□□ 1.43
CAPN1-207ENST00000527189 EIF4G3O43432 1585 aaKnown RBP23.99■■□□□ 1.43
CAPN1-207ENST00000527189 AQRO60306 1485 aaKnown RBP eCLIP23.98■■□□□ 1.434e-7■■■■□ 19.3
CAPN1-207ENST00000527189 RAD54L2Q9Y4B4 1467 aa23.94■■□□□ 1.42
CAPN1-207ENST00000527189 CUX1P39880 1505 aa23.93■■□□□ 1.42
CAPN1-207ENST00000527189 FGD5Q6ZNL6 1462 aa23.92■■□□□ 1.42
CAPN1-207ENST00000527189 CYB5RLQ6IPT4 315 aa23.89■■□□□ 1.41
CAPN1-207ENST00000527189 WDR97A6NE52 1622 aa23.88■■□□□ 1.41
CAPN1-207ENST00000527189 TDRD9Q8NDG6 1382 aaKnown RBP23.88■■□□□ 1.41
CAPN1-207ENST00000527189 TRHP20396 242 aaPredicted RBP23.86■■□□□ 1.41
CAPN1-207ENST00000527189 ARAP1Q96P48 1450 aa23.86■■□□□ 1.41
CAPN1-207ENST00000527189 CHD1O14646 1710 aa23.81■■□□□ 1.4
CAPN1-207ENST00000527189 FBLN2P98095 1184 aa23.79■■□□□ 1.4
CAPN1-207ENST00000527189 AEBP2Q6ZN18 517 aaPredicted RBP23.75■■□□□ 1.39
CAPN1-207ENST00000527189 GRIN2BQ13224 1484 aa23.75■■□□□ 1.39
CAPN1-207ENST00000527189 MAGI1Q96QZ7 1491 aaPredicted RBP23.73■■□□□ 1.39
CAPN1-207ENST00000527189 SNAPC4Q5SXM2 1469 aa23.72■■□□□ 1.39
CAPN1-207ENST00000527189 ABCA10Q8WWZ4 1543 aa23.71■■□□□ 1.39
CAPN1-207ENST00000527189 CHMP7Q8WUX9 453 aaPredicted RBP23.7■■□□□ 1.38
CAPN1-207ENST00000527189 GAPVD1Q14C86 1478 aa23.68■■□□□ 1.38
CAPN1-207ENST00000527189 WRNQ14191 1432 aaPredicted RBP eCLIP23.68■■□□□ 1.38
CAPN1-207ENST00000527189 SYNJ2O15056 1496 aa23.64■■□□□ 1.38
CAPN1-207ENST00000527189 TOP2BQ02880 1626 aa23.63■■□□□ 1.37
CAPN1-207ENST00000527189 BIVM-ERCC5R4GMW8 1640 aa23.62■■□□□ 1.37
CAPN1-207ENST00000527189 ABCA5Q8WWZ7 1642 aa23.59■■□□□ 1.37
CAPN1-207ENST00000527189 PBRM1Q86U86 1689 aa23.57■■□□□ 1.36
CAPN1-207ENST00000527189 SYNJ1O43426 1573 aa23.57■■□□□ 1.36
CAPN1-207ENST00000527189 CLASP1Q7Z460 1538 aa23.54■■□□□ 1.36
CAPN1-207ENST00000527189 ERICH3Q5RHP9 1530 aa23.42■■□□□ 1.34
CAPN1-207ENST00000527189 GRIN2AQ12879 1464 aa23.42■■□□□ 1.34
CAPN1-207ENST00000527189 FHAD1B1AJZ9 1412 aa23.42■■□□□ 1.34
CAPN1-207ENST00000527189 ADAMTS12P58397 1594 aa23.39■■□□□ 1.33
CAPN1-207ENST00000527189 NUP160Q12769 1436 aa23.35■■□□□ 1.33
CAPN1-207ENST00000527189 CEP170Q5SW79 1584 aa23.27■■□□□ 1.32
CAPN1-207ENST00000527189 KIF27Q86VH2 1401 aa23.24■■□□□ 1.31
CAPN1-207ENST00000527189 IGF1RP08069 1367 aa23.2■■□□□ 1.3
CAPN1-207ENST00000527189 SHROOM2Q13796 1616 aa23.18■■□□□ 1.3
CAPN1-207ENST00000527189 JPH4Q96JJ6 628 aa23.16■■□□□ 1.3
CAPN1-207ENST00000527189 ERCC6L2Q5T890 1561 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms