RNA–Protein interactions for RNA: ENST00000495528.1

VIM-207, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 962 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-207ENST00000495528 KANK1Q14678 1352 aa9.82□□□□□ -0.84
VIM-207ENST00000495528 DAPK1P53355 1430 aa9.82□□□□□ -0.84
VIM-207ENST00000495528 J3QW42 95 aa9.81□□□□□ -0.84
VIM-207ENST00000495528 CPB1P15086 417 aa9.81□□□□□ -0.84
VIM-207ENST00000495528 ZSCAN29Q8IWY8 852 aaPredicted RBP9.81□□□□□ -0.84
VIM-207ENST00000495528 OR13H1Q8NG92 308 aa9.81□□□□□ -0.84
VIM-207ENST00000495528 NEDD1Q8NHV4 660 aa9.81□□□□□ -0.84
VIM-207ENST00000495528 SLC6A14Q9UN76 642 aa9.81□□□□□ -0.84
VIM-207ENST00000495528 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.81□□□□□ -0.84
VIM-207ENST00000495528 ADARB2-AS1A8MUL3 147 aa9.8□□□□□ -0.84
VIM-207ENST00000495528 PHF20L1A8MW92 1017 aa9.8□□□□□ -0.84
VIM-207ENST00000495528 CES1P23141 567 aa9.8□□□□□ -0.84
VIM-207ENST00000495528 LORP23490 312 aaPredicted RBP9.8□□□□□ -0.84
VIM-207ENST00000495528 INSM1Q01101 510 aaPredicted RBP9.8□□□□□ -0.84
VIM-207ENST00000495528 ORC1Q13415 861 aa9.8□□□□□ -0.84
VIM-207ENST00000495528 COL13A1Q5TAT6 717 aaPredicted RBP9.8□□□□□ -0.84
VIM-207ENST00000495528 FAM35AQ86V20 835 aa9.8□□□□□ -0.84
VIM-207ENST00000495528 SNX29Q8TEQ0 813 aa9.8□□□□□ -0.84
VIM-207ENST00000495528 DMRTB1Q96MA1 342 aa9.8□□□□□ -0.84
VIM-207ENST00000495528 CHRDQ9H2X0 955 aa9.8□□□□□ -0.84
VIM-207ENST00000495528 PIK3C2BO00750 1634 aa9.8□□□□□ -0.84
VIM-207ENST00000495528 ANKRD30AQ9BXX3 1397 aa9.79□□□□□ -0.84
VIM-207ENST00000495528 EFCAB6Q5THR3 1501 aa9.79□□□□□ -0.84
VIM-207ENST00000495528 GPLD1P80108 840 aa9.79□□□□□ -0.84
VIM-207ENST00000495528 TRPM4Q8TD43 1214 aa9.79□□□□□ -0.84
VIM-207ENST00000495528 ASB16Q96NS5 453 aa9.79□□□□□ -0.84
VIM-207ENST00000495528 SLC52A1Q9NWF4 448 aa9.79□□□□□ -0.84
VIM-207ENST00000495528 NOS1P29475 1434 aa9.79□□□□□ -0.84
VIM-207ENST00000495528 PTPN23Q9H3S7 1636 aa9.78□□□□□ -0.84
VIM-207ENST00000495528 LMTK2Q8IWU2 1503 aa9.78□□□□□ -0.84
VIM-207ENST00000495528 TET3O43151 1660 aa9.78□□□□□ -0.84
VIM-207ENST00000495528 XIRP1Q702N8 1843 aaKnown RBP9.78□□□□□ -0.84
VIM-207ENST00000495528 EREGO14944 169 aa9.78□□□□□ -0.84
VIM-207ENST00000495528 IGHA2P01877 340 aa9.78□□□□□ -0.84
VIM-207ENST00000495528 POLR3DP05423 398 aaPredicted RBP9.78□□□□□ -0.84
VIM-207ENST00000495528 EIF2AK2P19525 551 aaKnown RBP9.78□□□□□ -0.84
VIM-207ENST00000495528 NRLP54845 237 aa9.78□□□□□ -0.84
VIM-207ENST00000495528 HYAL2Q12891 473 aa9.78□□□□□ -0.84
VIM-207ENST00000495528 CHSY3Q70JA7 882 aa9.78□□□□□ -0.84
VIM-207ENST00000495528 NCAPG2Q86XI2 1143 aa9.78□□□□□ -0.84
VIM-207ENST00000495528 NUDT8Q8WV74 236 aa9.78□□□□□ -0.84
VIM-207ENST00000495528 BTBD6Q96KE9 485 aa9.78□□□□□ -0.84
VIM-207ENST00000495528 MDFIQ99750 246 aa9.78□□□□□ -0.84
VIM-207ENST00000495528 RRAGCQ9HB90 399 aa9.78□□□□□ -0.84
VIM-207ENST00000495528 NAGPAQ9UK23 515 aa9.78□□□□□ -0.84
VIM-207ENST00000495528 FGD6Q6ZV73 1430 aa9.78□□□□□ -0.84
VIM-207ENST00000495528 LOC102724428A0A0B4J2F2 783 aa9.77□□□□□ -0.85
VIM-207ENST00000495528 ANKRD33BA6NCL7 494 aa9.77□□□□□ -0.85
VIM-207ENST00000495528 SOX18P35713 384 aa9.77□□□□□ -0.85
VIM-207ENST00000495528 SIK1P57059 783 aa9.77□□□□□ -0.85
VIM-207ENST00000495528 PLCB3Q01970 1234 aa9.77□□□□□ -0.85
VIM-207ENST00000495528 PCSK7Q16549 785 aa9.77□□□□□ -0.85
VIM-207ENST00000495528 USPL1Q5W0Q7 1092 aa9.77□□□□□ -0.85
VIM-207ENST00000495528 ZFYVE28Q9HCC9 887 aa9.77□□□□□ -0.85
VIM-207ENST00000495528 ENAMQ9NRM1 1142 aa9.77□□□□□ -0.85
VIM-207ENST00000495528 STARD13Q9Y3M8 1113 aa9.76□□□□□ -0.85
VIM-207ENST00000495528 TREHO43280 583 aa9.75□□□□□ -0.85
VIM-207ENST00000495528 ARHGEF15O94989 841 aa9.75□□□□□ -0.85
VIM-207ENST00000495528 GHRHP01286 108 aa9.75□□□□□ -0.85
VIM-207ENST00000495528 NEFLP07196 543 aa9.75□□□□□ -0.85
VIM-207ENST00000495528 MAPK8P45983 427 aa9.75□□□□□ -0.85
VIM-207ENST00000495528 FAM50AQ14320 339 aaKnown RBP9.75□□□□□ -0.85
VIM-207ENST00000495528 PERM1Q5SV97 790 aa9.75□□□□□ -0.85
VIM-207ENST00000495528 PSAPL1Q6NUJ1 521 aa9.75□□□□□ -0.85
VIM-207ENST00000495528 ELMSAN1Q6PJG2 1045 aa9.75□□□□□ -0.85
VIM-207ENST00000495528 C8orf86Q6ZUL3 223 aa9.75□□□□□ -0.85
VIM-207ENST00000495528 PMEPA1Q969W9 287 aa9.75□□□□□ -0.85
VIM-207ENST00000495528 SPACA7Q96KW9 195 aa9.75□□□□□ -0.85
VIM-207ENST00000495528 LRRC4BQ9NT99 713 aa9.75□□□□□ -0.85
VIM-207ENST00000495528 AMOTL2Q9Y2J4 779 aa9.75□□□□□ -0.85
VIM-207ENST00000495528 MSH6P52701 1360 aa9.75□□□□□ -0.85
VIM-207ENST00000495528 CROCC2H7BZ55 1655 aa9.74□□□□□ -0.85
VIM-207ENST00000495528 EIF1AYO14602 144 aaKnown RBP9.74□□□□□ -0.85
VIM-207ENST00000495528 ACPPP15309 386 aa9.74□□□□□ -0.85
VIM-207ENST00000495528 MFAP1P55081 439 aaKnown RBP9.74□□□□□ -0.85
VIM-207ENST00000495528 DSC3Q14574 896 aa9.74□□□□□ -0.85
VIM-207ENST00000495528 DNAJC14Q6Y2X3 702 aaPredicted RBP9.74□□□□□ -0.85
VIM-207ENST00000495528 ALKBH8Q96BT7 664 aaKnown RBP9.74□□□□□ -0.85
VIM-207ENST00000495528 TBX22Q9Y458 520 aa9.74□□□□□ -0.85
VIM-207ENST00000495528 M0R082 166 aa9.73□□□□□ -0.85
VIM-207ENST00000495528 CPNE3O75131 537 aaKnown RBP9.73□□□□□ -0.85
VIM-207ENST00000495528 ALBP02768 609 aa9.73□□□□□ -0.85
VIM-207ENST00000495528 MICALL1Q8N3F8 863 aa9.73□□□□□ -0.85
VIM-207ENST00000495528 ZNF417Q8TAU3 575 aa9.73□□□□□ -0.85
VIM-207ENST00000495528 CSRNP1Q96S65 589 aa9.73□□□□□ -0.85
VIM-207ENST00000495528 ZNF587Q96SQ5 575 aaPredicted RBP9.73□□□□□ -0.85
VIM-207ENST00000495528 SMG9Q9H0W8 520 aaKnown RBP9.73□□□□□ -0.85
VIM-207ENST00000495528 JPH1Q9HDC5 661 aaPredicted RBP9.73□□□□□ -0.85
VIM-207ENST00000495528 SALL4Q9UJQ4 1053 aa9.73□□□□□ -0.85
VIM-207ENST00000495528 ROBO1Q9Y6N7 1651 aa9.73□□□□□ -0.85
VIM-207ENST00000495528 PLEKHG1Q9ULL1 1385 aa9.73□□□□□ -0.85
VIM-207ENST00000495528 ZFYVE9O95405 1425 aa9.73□□□□□ -0.85
VIM-207ENST00000495528 ANKRD50Q9ULJ7 1429 aa9.73□□□□□ -0.85
VIM-207ENST00000495528 RIMS2Q9UQ26 1411 aa9.73□□□□□ -0.85
VIM-207ENST00000495528 NKTRP30414 1462 aaKnown RBP9.72□□□□□ -0.85
VIM-207ENST00000495528 ADGRB3O60242 1522 aa9.72□□□□□ -0.85
VIM-207ENST00000495528 KDM5AP29375 1690 aaKnown RBP9.72□□□□□ -0.85
VIM-207ENST00000495528 PNMA6FA0A0J9YX94 578 aa9.72□□□□□ -0.85
VIM-207ENST00000495528 TRPA1O75762 1119 aa9.72□□□□□ -0.85
VIM-207ENST00000495528 HOXD8P13378 290 aaPredicted RBP9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms