RNA–Protein interactions for RNA: ENST00000443016.1

USP6NL-203, Transcript of USP6 N-terminal like, humanhuman

TSL 2

Gene USP6NL, Length 2,491 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-203ENST00000443016 FBXO33Q7Z6M2 555 aa10.89□□□□□ -0.67
USP6NL-203ENST00000443016 VGLL2Q8N8G2 317 aa10.89□□□□□ -0.67
USP6NL-203ENST00000443016 TBC1D22AQ8WUA7 517 aa10.89□□□□□ -0.67
USP6NL-203ENST00000443016 ZBED3Q96IU2 234 aaPredicted RBP10.89□□□□□ -0.67
USP6NL-203ENST00000443016 MEIS3Q99687 375 aa10.89□□□□□ -0.67
USP6NL-203ENST00000443016 BCAR3O75815 825 aa10.89□□□□□ -0.67
USP6NL-203ENST00000443016 GNAI3P08754 354 aa10.89□□□□□ -0.67
USP6NL-203ENST00000443016 SLC5A1P13866 664 aa10.89□□□□□ -0.67
USP6NL-203ENST00000443016 RFX5P48382 616 aaPredicted RBP10.89□□□□□ -0.67
USP6NL-203ENST00000443016 LPIN2Q92539 896 aa10.89□□□□□ -0.67
USP6NL-203ENST00000443016 CLUAP1Q96AJ1 413 aa10.89□□□□□ -0.67
USP6NL-203ENST00000443016 CEP126Q9P2H0 1117 aa10.89□□□□□ -0.67
USP6NL-203ENST00000443016 SERPINA10Q9UK55 444 aa10.89□□□□□ -0.67
USP6NL-203ENST00000443016 THSD7BQ9C0I4 1608 aa10.88□□□□□ -0.67
USP6NL-203ENST00000443016 PPP1R12BO60237 982 aaPredicted RBP10.88□□□□□ -0.67
USP6NL-203ENST00000443016 RASAL3Q86YV0 1011 aa10.88□□□□□ -0.67
USP6NL-203ENST00000443016 ANGEL1Q9UNK9 670 aaKnown RBP10.88□□□□□ -0.67
USP6NL-203ENST00000443016 A0A1B0GUL6 1792 aa10.88□□□□□ -0.67
USP6NL-203ENST00000443016 TRPA1O75762 1119 aa10.87□□□□□ -0.67
USP6NL-203ENST00000443016 TNFAIP1Q13829 316 aa10.87□□□□□ -0.67
USP6NL-203ENST00000443016 SUPT20HL1Q3ZLR7 823 aa10.87□□□□□ -0.67
USP6NL-203ENST00000443016 INTS3Q68E01 1043 aaKnown RBP10.87□□□□□ -0.67
USP6NL-203ENST00000443016 ATF7IPQ6VMQ6 1270 aa10.87□□□□□ -0.67
USP6NL-203ENST00000443016 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.87□□□□□ -0.67
USP6NL-203ENST00000443016 TRIM27P14373 513 aa10.87□□□□□ -0.67
USP6NL-203ENST00000443016 CRKP46108 304 aa10.87□□□□□ -0.67
USP6NL-203ENST00000443016 MKRN3Q13064 507 aaKnown RBP10.87□□□□□ -0.67
USP6NL-203ENST00000443016 CSRNP1Q96S65 589 aa10.87□□□□□ -0.67
USP6NL-203ENST00000443016 TDRD3Q9H7E2 651 aaKnown RBP10.87□□□□□ -0.67
USP6NL-203ENST00000443016 PPP2R3BQ9Y5P8 575 aa10.87□□□□□ -0.67
USP6NL-203ENST00000443016 SPDYE4A6NLX3 237 aa10.86□□□□□ -0.67
USP6NL-203ENST00000443016 SRGAP3O43295 1099 aa10.86□□□□□ -0.67
USP6NL-203ENST00000443016 IL15P40933 162 aaPredicted RBP10.86□□□□□ -0.67
USP6NL-203ENST00000443016 RASA3Q14644 834 aa10.86□□□□□ -0.67
USP6NL-203ENST00000443016 ATP2B3Q16720 1220 aa10.86□□□□□ -0.67
USP6NL-203ENST00000443016 ATG9AQ7Z3C6 839 aa10.86□□□□□ -0.67
USP6NL-203ENST00000443016 REM2Q8IYK8 340 aaPredicted RBP10.86□□□□□ -0.67
USP6NL-203ENST00000443016 DZIP1LQ8IYY4 767 aaKnown RBP10.86□□□□□ -0.67
USP6NL-203ENST00000443016 PA2G4Q9UQ80 394 aaKnown RBP10.86□□□□□ -0.67
USP6NL-203ENST00000443016 PAPPA2Q9BXP8 1791 aa10.86□□□□□ -0.67
USP6NL-203ENST00000443016 ZNF646O15015 1829 aaPredicted RBP10.86□□□□□ -0.67
USP6NL-203ENST00000443016 CIAO1O76071 339 aa10.86□□□□□ -0.67
USP6NL-203ENST00000443016 FGFR2P21802 821 aa10.86□□□□□ -0.67
USP6NL-203ENST00000443016 TEKT1Q969V4 418 aa10.86□□□□□ -0.67
USP6NL-203ENST00000443016 GNL3LQ9NVN8 582 aaKnown RBP10.86□□□□□ -0.67
USP6NL-203ENST00000443016 FZD1Q9UP38 647 aa10.86□□□□□ -0.67
USP6NL-203ENST00000443016 ZKSCAN2Q63HK3 967 aa10.85□□□□□ -0.67
USP6NL-203ENST00000443016 RNF186Q9NXI6 227 aa10.85□□□□□ -0.67
USP6NL-203ENST00000443016 SAGE1Q9NXZ1 904 aa10.85□□□□□ -0.67
USP6NL-203ENST00000443016 ZNF70Q9UC06 446 aaPredicted RBP10.85□□□□□ -0.67
USP6NL-203ENST00000443016 COL1A1P02452 1464 aaPredicted RBP10.85□□□□□ -0.67
USP6NL-203ENST00000443016 TCP10L2B9ZVM9 353 aa10.85□□□□□ -0.67
USP6NL-203ENST00000443016 TNNI2P48788 182 aa10.85□□□□□ -0.67
USP6NL-203ENST00000443016 SPDYE2Q495Y8 402 aa10.85□□□□□ -0.67
USP6NL-203ENST00000443016 NBPF12Q5TAG4 269 aaPredicted RBP10.85□□□□□ -0.67
USP6NL-203ENST00000443016 FTSJ3Q8IY81 847 aaKnown RBP10.85□□□□□ -0.67
USP6NL-203ENST00000443016 KCTD17Q8N5Z5 321 aa10.85□□□□□ -0.67
USP6NL-203ENST00000443016 WDR66Q8TBY9 1149 aa10.85□□□□□ -0.67
USP6NL-203ENST00000443016 COPRSQ9NQ92 184 aa10.85□□□□□ -0.67
USP6NL-203ENST00000443016 TMOD2Q9NZR1 351 aa10.85□□□□□ -0.67
USP6NL-203ENST00000443016 MAST3O60307 1309 aa10.85□□□□□ -0.67
USP6NL-203ENST00000443016 AOX1Q06278 1338 aa10.85□□□□□ -0.67
USP6NL-203ENST00000443016 GNAI2P04899 355 aa10.84□□□□□ -0.67
USP6NL-203ENST00000443016 GRIK5Q16478 980 aa10.84□□□□□ -0.67
USP6NL-203ENST00000443016 SLC10A4Q96EP9 437 aa10.84□□□□□ -0.67
USP6NL-203ENST00000443016 SLC24A3Q9HC58 644 aa10.84□□□□□ -0.67
USP6NL-203ENST00000443016 IREB2P48200 963 aaKnown RBP10.84□□□□□ -0.67
USP6NL-203ENST00000443016 HDLBPQ00341 1268 aaKnown RBP10.84□□□□□ -0.67
USP6NL-203ENST00000443016 RCAN3Q9UKA8 241 aa10.84□□□□□ -0.67
USP6NL-203ENST00000443016 TNNQ9UQP3 1299 aa10.84□□□□□ -0.67
USP6NL-203ENST00000443016 SUGT1Q9Y2Z0 365 aa10.84□□□□□ -0.67
USP6NL-203ENST00000443016 SREBF2Q12772 1141 aa10.83□□□□□ -0.68
USP6NL-203ENST00000443016 ABHD8Q96I13 439 aa10.83□□□□□ -0.68
USP6NL-203ENST00000443016 APBB1O00213 710 aa10.83□□□□□ -0.68
USP6NL-203ENST00000443016 RAD21O60216 631 aa10.83□□□□□ -0.68
USP6NL-203ENST00000443016 LDLRAD1Q5T700 205 aa10.83□□□□□ -0.68
USP6NL-203ENST00000443016 FOXD4L5Q5VV16 416 aaPredicted RBP10.83□□□□□ -0.68
USP6NL-203ENST00000443016 FOXD4L4Q8WXT5 416 aaPredicted RBP10.83□□□□□ -0.68
USP6NL-203ENST00000443016 MTMR7Q9Y216 660 aa10.83□□□□□ -0.68
USP6NL-203ENST00000443016 CASP8AP2Q9UKL3 1982 aa10.83□□□□□ -0.68
USP6NL-203ENST00000443016 CACNB3P54284 484 aa10.82□□□□□ -0.68
USP6NL-203ENST00000443016 DGKZQ13574 1117 aa10.82□□□□□ -0.68
USP6NL-203ENST00000443016 TMEM57Q8N5G2 664 aa10.82□□□□□ -0.68
USP6NL-203ENST00000443016 RGS22Q8NE09 1264 aa10.82□□□□□ -0.68
USP6NL-203ENST00000443016 TMEM39BQ9GZU3 492 aa10.82□□□□□ -0.68
USP6NL-203ENST00000443016 AKAP2Q9Y2D5 859 aa10.82□□□□□ -0.68
USP6NL-203ENST00000443016 TIMM10P62072 90 aa10.82□□□□□ -0.68
USP6NL-203ENST00000443016 MTX1Q13505 466 aa10.82□□□□□ -0.68
USP6NL-203ENST00000443016 SPRYD7Q5W111 196 aa10.82□□□□□ -0.68
USP6NL-203ENST00000443016 ANKRD13AQ8IZ07 590 aa10.82□□□□□ -0.68
USP6NL-203ENST00000443016 CLMNQ96JQ2 1002 aa10.82□□□□□ -0.68
USP6NL-203ENST00000443016 ZDHHC15Q96MV8 337 aa10.82□□□□□ -0.68
USP6NL-203ENST00000443016 NEUROD6Q96NK8 337 aa10.82□□□□□ -0.68
USP6NL-203ENST00000443016 DENND2AQ9ULE3 1009 aa10.82□□□□□ -0.68
USP6NL-203ENST00000443016 CCDC85CA6NKD9 419 aa10.81□□□□□ -0.68
USP6NL-203ENST00000443016 LDHBP07195 334 aaKnown RBP10.81□□□□□ -0.68
USP6NL-203ENST00000443016 PHKA1P46020 1223 aa10.81□□□□□ -0.68
USP6NL-203ENST00000443016 TFCP2Q12800 502 aa10.81□□□□□ -0.68
USP6NL-203ENST00000443016 G3BP1Q13283 466 aaKnown RBP eCLIP10.81□□□□□ -0.68
USP6NL-203ENST00000443016 MAP3K11Q16584 847 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms