RNA–Protein interactions for RNA: ENST00000455661.5

PTPRE-204, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 2

Gene PTPRE, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-204ENST00000455661 OR2D2Q9H210 308 aa11.51□□□□□ -0.57
PTPRE-204ENST00000455661 WDR83OSQ9Y284 106 aa11.51□□□□□ -0.57
PTPRE-204ENST00000455661 TCF21O43680 179 aa11.51□□□□□ -0.57
PTPRE-204ENST00000455661 CLDN14O95500 239 aa11.51□□□□□ -0.57
PTPRE-204ENST00000455661 CHRNB4P30926 498 aa11.51□□□□□ -0.57
PTPRE-204ENST00000455661 ARR3P36575 388 aa11.51□□□□□ -0.57
PTPRE-204ENST00000455661 LINC00310P59036 64 aa11.51□□□□□ -0.57
PTPRE-204ENST00000455661 SUMO1P63165 101 aaKnown RBP11.51□□□□□ -0.57
PTPRE-204ENST00000455661 RPL19P84098 196 aaKnown RBP11.51□□□□□ -0.57
PTPRE-204ENST00000455661 ZNF808Q8N4W9 903 aaPredicted RBP11.51□□□□□ -0.57
PTPRE-204ENST00000455661 SLC35E1Q96K37 410 aa11.51□□□□□ -0.57
PTPRE-204ENST00000455661 MBNL3Q9NUK0 354 aaKnown RBP11.51□□□□□ -0.57
PTPRE-204ENST00000455661 ZNF407Q9C0G0 2248 aa11.5□□□□□ -0.57
PTPRE-204ENST00000455661 MPDU1O75352 247 aa11.5□□□□□ -0.57
PTPRE-204ENST00000455661 CXorf1O96002 111 aa11.5□□□□□ -0.57
PTPRE-204ENST00000455661 RFPL3SP0C7P2 107 aa11.5□□□□□ -0.57
PTPRE-204ENST00000455661 THBS3P49746 956 aa11.5□□□□□ -0.57
PTPRE-204ENST00000455661 GCSAMLQ5JQS6 135 aa11.5□□□□□ -0.57
PTPRE-204ENST00000455661 MCEMP1Q8IX19 187 aa11.5□□□□□ -0.57
PTPRE-204ENST00000455661 Q8IYB0 196 aa11.5□□□□□ -0.57
PTPRE-204ENST00000455661 RNF2Q99496 336 aa11.5□□□□□ -0.57
PTPRE-204ENST00000455661 DNAJC4Q9NNZ3 241 aa11.5□□□□□ -0.57
PTPRE-204ENST00000455661 TRBV20OR9-2A0A075B6H5 130 aa11.49□□□□□ -0.57
PTPRE-204ENST00000455661 TRBV9A0A0B4J1U6 114 aa11.49□□□□□ -0.57
PTPRE-204ENST00000455661 SCO2A0A1W2PP80 73 aa11.49□□□□□ -0.57
PTPRE-204ENST00000455661 DIRC3C9JPN6 131 aa11.49□□□□□ -0.57
PTPRE-204ENST00000455661 ARL14EPLP0DKL9 152 aa11.49□□□□□ -0.57
PTPRE-204ENST00000455661 CA6P23280 308 aa11.49□□□□□ -0.57
PTPRE-204ENST00000455661 TFPI2P48307 235 aa11.49□□□□□ -0.57
PTPRE-204ENST00000455661 KRTDAPP60985 99 aa11.49□□□□□ -0.57
PTPRE-204ENST00000455661 RPL30P62888 115 aaKnown RBP11.49□□□□□ -0.57
PTPRE-204ENST00000455661 SPINK9Q5DT21 86 aa11.49□□□□□ -0.57
PTPRE-204ENST00000455661 GALMQ96C23 342 aa11.49□□□□□ -0.57
PTPRE-204ENST00000455661 POM121L2Q96KW2 1035 aa11.49□□□□□ -0.57
PTPRE-204ENST00000455661 FAM103A1Q9BTL3 118 aaKnown RBP11.49□□□□□ -0.57
PTPRE-204ENST00000455661 DUSP23Q9BVJ7 150 aa11.49□□□□□ -0.57
PTPRE-204ENST00000455661 MSL2Q9HCI7 577 aa11.49□□□□□ -0.57
PTPRE-204ENST00000455661 SNURFLB1AK76 121 aa11.49□□□□□ -0.57
PTPRE-204ENST00000455661 SH2D1BO14796 132 aa11.49□□□□□ -0.57
PTPRE-204ENST00000455661 GDF1P27539 372 aa11.49□□□□□ -0.57
PTPRE-204ENST00000455661 IER3P46695 156 aa11.49□□□□□ -0.57
PTPRE-204ENST00000455661 RPP30P78346 268 aaKnown RBP11.49□□□□□ -0.57
PTPRE-204ENST00000455661 RPEL1Q2QD12 228 aa11.49□□□□□ -0.57
PTPRE-204ENST00000455661 PDLIM3Q53GG5 364 aaPredicted RBP11.49□□□□□ -0.57
PTPRE-204ENST00000455661 TCTEX1D1Q8N7M0 179 aa11.49□□□□□ -0.57
PTPRE-204ENST00000455661 TAAR6Q96RI8 345 aa11.49□□□□□ -0.57
PTPRE-204ENST00000455661 SDK2Q58EX2 2172 aa11.49□□□□□ -0.57
PTPRE-204ENST00000455661 SPEGQ15772 3267 aa11.49□□□□□ -0.57
PTPRE-204ENST00000455661 OPRK1P41145 380 aa11.48□□□□□ -0.57
PTPRE-204ENST00000455661 COMPP49747 757 aaPredicted RBP11.48□□□□□ -0.57
PTPRE-204ENST00000455661 LGALS4P56470 323 aa11.48□□□□□ -0.57
PTPRE-204ENST00000455661 HTD2P86397 168 aa11.48□□□□□ -0.57
PTPRE-204ENST00000455661 TRIP6Q15654 476 aaKnown RBP11.48□□□□□ -0.57
PTPRE-204ENST00000455661 RAB30Q15771 203 aa11.48□□□□□ -0.57
PTPRE-204ENST00000455661 SPATA45Q537H7 98 aa11.48□□□□□ -0.57
PTPRE-204ENST00000455661 Q8N7P7 452 aa11.48□□□□□ -0.57
PTPRE-204ENST00000455661 NINJ1Q92982 152 aa11.48□□□□□ -0.57
PTPRE-204ENST00000455661 TMEM204Q9BSN7 226 aa11.48□□□□□ -0.57
PTPRE-204ENST00000455661 LRFN3Q9BTN0 628 aa11.48□□□□□ -0.57
PTPRE-204ENST00000455661 RTL8AQ9BWD3 113 aa11.48□□□□□ -0.57
PTPRE-204ENST00000455661 ASCL3Q9NQ33 180 aa11.48□□□□□ -0.57
PTPRE-204ENST00000455661 UQCR10Q9UDW1 63 aa11.48□□□□□ -0.57
PTPRE-204ENST00000455661 SLC45A2Q9UMX9 530 aa11.48□□□□□ -0.57
PTPRE-204ENST00000455661 POLDIP2Q9Y2S7 368 aa11.48□□□□□ -0.57
PTPRE-204ENST00000455661 CABIN1Q9Y6J0 2220 aa11.48□□□□□ -0.57
PTPRE-204ENST00000455661 IGKV3D-15A0A087WSY6 115 aa11.48□□□□□ -0.57
PTPRE-204ENST00000455661 C17orf98A8MV24 154 aa11.48□□□□□ -0.57
PTPRE-204ENST00000455661 SLC17A3O00476 420 aa11.48□□□□□ -0.57
PTPRE-204ENST00000455661 GPX1P07203 203 aa11.48□□□□□ -0.57
PTPRE-204ENST00000455661 STAG3L2P0CL84 134 aa11.48□□□□□ -0.57
PTPRE-204ENST00000455661 STAG3L3P0CL85 134 aa11.48□□□□□ -0.57
PTPRE-204ENST00000455661 TGFBR3Q03167 851 aa11.48□□□□□ -0.57
PTPRE-204ENST00000455661 IL11RAQ14626 422 aa11.48□□□□□ -0.57
PTPRE-204ENST00000455661 HLA-DRB5Q30154 266 aa11.48□□□□□ -0.57
PTPRE-204ENST00000455661 FBXL7Q9UJT9 491 aa11.48□□□□□ -0.57
PTPRE-204ENST00000455661 C20orf202A1L168 122 aa11.47□□□□□ -0.57
PTPRE-204ENST00000455661 ZNF503-AS2A6NEH8 195 aa11.47□□□□□ -0.57
PTPRE-204ENST00000455661 C15orf62A8K5M9 175 aa11.47□□□□□ -0.57
PTPRE-204ENST00000455661 KLF7O75840 302 aaPredicted RBP11.47□□□□□ -0.57
PTPRE-204ENST00000455661 NEURL1O76050 574 aa11.47□□□□□ -0.57
PTPRE-204ENST00000455661 MMDQ15546 238 aa11.47□□□□□ -0.57
PTPRE-204ENST00000455661 KRTCAP3Q53RY4 240 aa11.47□□□□□ -0.57
PTPRE-204ENST00000455661 FBXW9Q5XUX1 488 aa11.47□□□□□ -0.57
PTPRE-204ENST00000455661 C1orf174Q8IYL3 243 aa11.47□□□□□ -0.57
PTPRE-204ENST00000455661 GNB1LQ9BYB4 327 aa11.47□□□□□ -0.57
PTPRE-204ENST00000455661 MMP23AO75900 390 aa11.47□□□□□ -0.57
PTPRE-204ENST00000455661 NXPH2O95156 264 aa11.47□□□□□ -0.57
PTPRE-204ENST00000455661 MT-CO2P00403 227 aa11.47□□□□□ -0.57
PTPRE-204ENST00000455661 SRFP11831 508 aa11.47□□□□□ -0.57
PTPRE-204ENST00000455661 ARL6IP6Q8N6S5 226 aa11.47□□□□□ -0.57
PTPRE-204ENST00000455661 CEP192Q8TEP8 1941 aa11.47□□□□□ -0.57
PTPRE-204ENST00000455661 STARD4Q96DR4 205 aa11.47□□□□□ -0.57
PTPRE-204ENST00000455661 UHRF2Q96PU4 802 aa11.47□□□□□ -0.57
PTPRE-204ENST00000455661 TXN2Q99757 166 aa11.47□□□□□ -0.57
PTPRE-204ENST00000455661 ZNF703Q9H7S9 590 aaPredicted RBP11.47□□□□□ -0.57
PTPRE-204ENST00000455661 FOXJ2Q9P0K8 574 aa11.47□□□□□ -0.57
PTPRE-204ENST00000455661 LAMA1P25391 3075 aa11.46□□□□□ -0.57
PTPRE-204ENST00000455661 TMEM30CPA0ZSE6 113 aa11.46□□□□□ -0.57
PTPRE-204ENST00000455661 F2Z2F3 143 aa11.46□□□□□ -0.57
PTPRE-204ENST00000455661 SRYQ05066 204 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms