RNA–Protein interactions for RNA: ENST00000622697.4

GABRB3-215, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 5,876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-215ENST00000622697 COX7A2P2O60397 106 aa14.12□□□□□ -0.15
GABRB3-215ENST00000622697 P2RY1P47900 373 aa14.12□□□□□ -0.15
GABRB3-215ENST00000622697 SMUG1Q53HV7 270 aa14.12□□□□□ -0.15
GABRB3-215ENST00000622697 OR1K1Q8NGR3 316 aa14.12□□□□□ -0.15
GABRB3-215ENST00000622697 LPAR5Q9H1C0 372 aa14.12□□□□□ -0.15
GABRB3-215ENST00000622697 ZNF107Q9UII5 783 aaPredicted RBP14.12□□□□□ -0.15
GABRB3-215ENST00000622697 PDCD11Q14690 1871 aaKnown RBP14.12□□□□□ -0.15
GABRB3-215ENST00000622697 EGR4Q05215 589 aa14.12□□□□□ -0.15
GABRB3-215ENST00000622697 ACSM6Q6P461 480 aa14.12□□□□□ -0.15
GABRB3-215ENST00000622697 ZNF260Q3ZCT1 412 aa14.12□□□□□ -0.15
GABRB3-215ENST00000622697 GALR1P47211 349 aa14.12□□□□□ -0.15
GABRB3-215ENST00000622697 EWSR1Q01844 656 aaKnown RBP eCLIP14.12□□□□□ -0.15
GABRB3-215ENST00000622697 NHLH2Q02577 135 aa14.12□□□□□ -0.15
GABRB3-215ENST00000622697 C1QTNF12Q5T7M4 302 aa14.12□□□□□ -0.15
GABRB3-215ENST00000622697 SIGLECL1Q8N7X8 197 aa14.12□□□□□ -0.15
GABRB3-215ENST00000622697 OR10G4Q8NGN3 311 aa14.12□□□□□ -0.15
GABRB3-215ENST00000622697 OR10G9Q8NGN4 311 aa14.12□□□□□ -0.15
GABRB3-215ENST00000622697 OR10G7Q8NGN6 311 aa14.12□□□□□ -0.15
GABRB3-215ENST00000622697 MRGPRFQ96AM1 343 aa14.12□□□□□ -0.15
GABRB3-215ENST00000622697 TMEM18Q96B42 140 aa14.12□□□□□ -0.15
GABRB3-215ENST00000622697 KCNK17Q96T54 332 aa14.12□□□□□ -0.15
GABRB3-215ENST00000622697 OR5B21A6NL26 309 aa14.11□□□□□ -0.15
GABRB3-215ENST00000622697 ZP4Q12836 540 aa14.11□□□□□ -0.15
GABRB3-215ENST00000622697 TMEM241Q24JQ0 296 aa14.11□□□□□ -0.15
GABRB3-215ENST00000622697 ZNF660Q6AZW8 331 aaPredicted RBP14.11□□□□□ -0.15
GABRB3-215ENST00000622697 TMEM65Q6PI78 240 aa14.11□□□□□ -0.15
GABRB3-215ENST00000622697 DUSP15Q9H1R2 295 aaPredicted RBP14.11□□□□□ -0.15
GABRB3-215ENST00000622697 PSME4Q14997 1843 aa14.11□□□□□ -0.15
GABRB3-215ENST00000622697 CLDN34H7C241 214 aa14.11□□□□□ -0.15
GABRB3-215ENST00000622697 CEBPEQ15744 281 aa14.11□□□□□ -0.15
GABRB3-215ENST00000622697 RSPO4Q2I0M5 234 aaPredicted RBP14.11□□□□□ -0.15
GABRB3-215ENST00000622697 POM121L2Q96KW2 1035 aa14.11□□□□□ -0.15
GABRB3-215ENST00000622697 K7EQM0 130 aa14.11□□□□□ -0.15
GABRB3-215ENST00000622697 SYNGR2O43760 224 aa14.11□□□□□ -0.15
GABRB3-215ENST00000622697 CPEB3Q8NE35 698 aaKnown RBP14.11□□□□□ -0.15
GABRB3-215ENST00000622697 CDX2Q99626 313 aaPredicted RBP14.11□□□□□ -0.15
GABRB3-215ENST00000622697 PGA4P0DJD7 388 aa14.11□□□□□ -0.15
GABRB3-215ENST00000622697 CHRNB4P30926 498 aa14.11□□□□□ -0.15
GABRB3-215ENST00000622697 KRTDAPP60985 99 aa14.11□□□□□ -0.15
GABRB3-215ENST00000622697 ERVS71-1P61550 626 aa14.11□□□□□ -0.15
GABRB3-215ENST00000622697 ETV3LQ6ZN32 361 aa14.11□□□□□ -0.15
GABRB3-215ENST00000622697 ALX4Q9H161 411 aaPredicted RBP14.11□□□□□ -0.15
GABRB3-215ENST00000622697 MPC1Q9Y5U8 109 aa14.11□□□□□ -0.15
GABRB3-215ENST00000622697 POMT1Q9Y6A1 747 aa14.11□□□□□ -0.15
GABRB3-215ENST00000622697 GREB1Q4ZG55 1949 aa14.11□□□□□ -0.15
GABRB3-215ENST00000622697 SCN4AP35499 1836 aa14.11□□□□□ -0.15
GABRB3-215ENST00000622697 LOC101059948A0A1B0GTJ6 334 aa14.1□□□□□ -0.15
GABRB3-215ENST00000622697 ROM1Q03395 351 aa14.1□□□□□ -0.15
GABRB3-215ENST00000622697 TRAPPC1Q9Y5R8 145 aa14.1□□□□□ -0.15
GABRB3-215ENST00000622697 TRBV5-7A0A0A0MS05 114 aa14.1□□□□□ -0.15
GABRB3-215ENST00000622697 SERTM2A0A1B0GWG4 89 aa14.1□□□□□ -0.15
GABRB3-215ENST00000622697 SMIM15Q7Z3B0 74 aa14.1□□□□□ -0.15
GABRB3-215ENST00000622697 FAM210BQ96KR6 192 aa14.1□□□□□ -0.15
GABRB3-215ENST00000622697 AHCTF1Q8WYP5 2266 aa14.1□□□□□ -0.15
GABRB3-215ENST00000622697 C7orf77A4D0Y5 90 aa14.1□□□□□ -0.15
GABRB3-215ENST00000622697 CHEK1O14757 476 aa14.1□□□□□ -0.15
GABRB3-215ENST00000622697 CLEC3BP05452 202 aa14.1□□□□□ -0.15
GABRB3-215ENST00000622697 PMELP40967 661 aa14.1□□□□□ -0.15
GABRB3-215ENST00000622697 COL19A1Q14993 1142 aa14.1□□□□□ -0.15
GABRB3-215ENST00000622697 GPHA2Q96T91 129 aa14.1□□□□□ -0.15
GABRB3-215ENST00000622697 PRO1933Q9H354 126 aa14.1□□□□□ -0.15
GABRB3-215ENST00000622697 MKRN2OSH3BPM6 223 aa14.1□□□□□ -0.15
GABRB3-215ENST00000622697 KLF4O43474 513 aa14.1□□□□□ -0.15
GABRB3-215ENST00000622697 FSTP19883 344 aa14.1□□□□□ -0.15
GABRB3-215ENST00000622697 MDH2P40926 338 aaKnown RBP14.1□□□□□ -0.15
GABRB3-215ENST00000622697 GUCA2BQ16661 112 aa14.1□□□□□ -0.15
GABRB3-215ENST00000622697 IGSF11Q5DX21 431 aa14.1□□□□□ -0.15
GABRB3-215ENST00000622697 UNQ9370/PRO34162Q6UXP9 181 aa14.1□□□□□ -0.15
GABRB3-215ENST00000622697 CHD5Q8TDI0 1954 aa14.1□□□□□ -0.15
GABRB3-215ENST00000622697 VDAC1P21796 283 aa14.1□□□□□ -0.15
GABRB3-215ENST00000622697 PSG4Q00888 419 aa14.1□□□□□ -0.15
GABRB3-215ENST00000622697 MOB3BQ86TA1 216 aa14.1□□□□□ -0.15
GABRB3-215ENST00000622697 CCL17Q92583 94 aa14.1□□□□□ -0.15
GABRB3-215ENST00000622697 SEC11CQ9BY50 192 aa14.1□□□□□ -0.15
GABRB3-215ENST00000622697 A0A1W2PNV4 684 aa14.09□□□□□ -0.15
GABRB3-215ENST00000622697 APOBEC4Q8WW27 367 aaKnown RBP14.09□□□□□ -0.15
GABRB3-215ENST00000622697 ZNF251Q9BRH9 671 aa14.09□□□□□ -0.15
GABRB3-215ENST00000622697 GINS3Q9BRX5 216 aa14.09□□□□□ -0.15
GABRB3-215ENST00000622697 LHFPL6Q9Y693 200 aa14.09□□□□□ -0.15
GABRB3-215ENST00000622697 CASP8AP2Q9UKL3 1982 aa14.09□□□□□ -0.15
GABRB3-215ENST00000622697 HLA-DRB3P79483 266 aa14.09□□□□□ -0.15
GABRB3-215ENST00000622697 IL24Q13007 206 aa14.09□□□□□ -0.15
GABRB3-215ENST00000622697 GFRALQ6UXV0 394 aa14.09□□□□□ -0.15
GABRB3-215ENST00000622697 C10orf35Q96D05 121 aa14.09□□□□□ -0.15
GABRB3-215ENST00000622697 TIMD4Q96H15 378 aa14.09□□□□□ -0.15
GABRB3-215ENST00000622697 ATP5SQ99766 215 aa14.09□□□□□ -0.15
GABRB3-215ENST00000622697 PSG2P11465 335 aa14.09□□□□□ -0.15
GABRB3-215ENST00000622697 FAM181AQ8N9Y4 354 aa14.09□□□□□ -0.15
GABRB3-215ENST00000622697 CRYBA1P05813 215 aa14.09□□□□□ -0.15
GABRB3-215ENST00000622697 FCGR3AP08637 254 aa14.09□□□□□ -0.15
GABRB3-215ENST00000622697 EIF3IQ13347 325 aaKnown RBP14.09□□□□□ -0.15
GABRB3-215ENST00000622697 PTX4Q96A99 478 aa14.09□□□□□ -0.15
GABRB3-215ENST00000622697 DOK5Q9P104 306 aa14.09□□□□□ -0.15
GABRB3-215ENST00000622697 RCC2Q9P258 522 aaKnown RBP14.09□□□□□ -0.15
GABRB3-215ENST00000622697 KIAA1456Q9P272 454 aa14.09□□□□□ -0.15
GABRB3-215ENST00000622697 TGOLN2O43493 480 aa14.08□□□□□ -0.15
GABRB3-215ENST00000622697 BPIFB3P59826 476 aa14.08□□□□□ -0.15
GABRB3-215ENST00000622697 IFT22Q9H7X7 185 aa14.08□□□□□ -0.15
GABRB3-215ENST00000622697 TGFBR3LH3BV60 316 aa14.08□□□□□ -0.16
GABRB3-215ENST00000622697 FABP1P07148 127 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms